RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 CD300EQ496F6 205 aaPredicted RBP16.35■□□□□ 0.21
KCNMA1-293ENST00000640969 ATP5L2Q7Z4Y8 100 aa16.35■□□□□ 0.21
KCNMA1-293ENST00000640969 HIST1H2BLQ99880 126 aa16.35■□□□□ 0.21
KCNMA1-293ENST00000640969 F2Z2F3 143 aa16.35■□□□□ 0.21
KCNMA1-293ENST00000640969 COL11A2P13942 1736 aaPredicted RBP16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 CRPP02741 224 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 CD33P20138 364 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 ZNF479Q96JC4 524 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 IGLV3-12A0A075B6K2 115 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 GZMBP10144 247 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 ADARB2-AS1A8MUL3 147 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 PAX8Q06710 450 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 HSD52Q0P140 79 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 OVOL1O14753 267 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 A8MWV9 139 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 TIMP3P35625 211 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 ERVK11-1P61568 191 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 SPRR3Q9UBC9 169 aa16.34■□□□□ 0.21
KCNMA1-293ENST00000640969 COL5A3P25940 1745 aaPredicted RBP16.33■□□□□ 0.21
KCNMA1-293ENST00000640969 IGKV2-40A0A087WW87 121 aaPredicted RBP16.33■□□□□ 0.21
KCNMA1-293ENST00000640969 A6NNC1 897 aa16.33■□□□□ 0.21
KCNMA1-293ENST00000640969 IGKV2D-40P01614 121 aaPredicted RBP16.33■□□□□ 0.21
KCNMA1-293ENST00000640969 CEACAM1P13688 526 aa16.33■□□□□ 0.21
KCNMA1-293ENST00000640969 SRSF6Q13247 344 aaKnown RBP16.33■□□□□ 0.21
KCNMA1-293ENST00000640969 TREML4Q6UXN2 200 aa16.33■□□□□ 0.21
KCNMA1-293ENST00000640969 FGFBP3Q8TAT2 258 aa16.33■□□□□ 0.21
KCNMA1-293ENST00000640969 CXCL1P09341 107 aa16.33■□□□□ 0.2
KCNMA1-293ENST00000640969 SAMD5Q5TGI4 173 aa16.33■□□□□ 0.2
KCNMA1-293ENST00000640969 VWCEQ96DN2 955 aa16.33■□□□□ 0.2
KCNMA1-293ENST00000640969 LAGE3Q14657 143 aa16.33■□□□□ 0.2
KCNMA1-293ENST00000640969 IGLV3-32A0A0A0MS00 114 aa16.33■□□□□ 0.2
KCNMA1-293ENST00000640969 NPIPB5A8MRT5 1133 aa16.33■□□□□ 0.2
KCNMA1-293ENST00000640969 SPATA31B1PQ5VZV4 182 aa16.33■□□□□ 0.2
KCNMA1-293ENST00000640969 SIGMAR1Q99720 223 aa16.33■□□□□ 0.2
KCNMA1-293ENST00000640969 RBBP6Q7Z6E9 1792 aaKnown RBP16.32■□□□□ 0.2
KCNMA1-293ENST00000640969 LOC102723996A0A087X1L8 192 aa16.32■□□□□ 0.2
KCNMA1-293ENST00000640969 PINLYPA6NC86 204 aa16.32■□□□□ 0.2
KCNMA1-293ENST00000640969 GGTLC3B5MD39 225 aa16.32■□□□□ 0.2
KCNMA1-293ENST00000640969 M0R2P5 195 aa16.32■□□□□ 0.2
KCNMA1-293ENST00000640969 CHCHD5Q9BSY4 110 aa16.32■□□□□ 0.2
KCNMA1-293ENST00000640969 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.32■□□□□ 0.2
KCNMA1-293ENST00000640969 HIST3H2BBQ8N257 126 aa16.32■□□□□ 0.2
KCNMA1-293ENST00000640969 IGHV1-46P01743 117 aa16.31■□□□□ 0.2
KCNMA1-293ENST00000640969 LINC00158P58513 81 aa16.31■□□□□ 0.2
KCNMA1-293ENST00000640969 C3orf36Q3SXR2 165 aa16.31■□□□□ 0.2
KCNMA1-293ENST00000640969 ATXN8Q156A1 80 aa16.31■□□□□ 0.2
KCNMA1-293ENST00000640969 GTSCR1Q86UQ5 136 aa16.31■□□□□ 0.2
KCNMA1-293ENST00000640969 ZNF688P0C7X2 276 aa16.31■□□□□ 0.2
KCNMA1-293ENST00000640969 PRR31Q5SQ13 230 aa16.31■□□□□ 0.2
KCNMA1-293ENST00000640969 NPC2P61916 151 aa16.31■□□□□ 0.2
KCNMA1-293ENST00000640969 SELENOKQ9Y6D0 94 aa16.31■□□□□ 0.2
KCNMA1-293ENST00000640969 TDGF1P3P51864 188 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 SEC11AP67812 179 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 GAGE13Q4V321 117 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 CRIM1Q9NZV1 1036 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 IGKV1-12A0A0C4DH73 117 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 MLNRO43193 412 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 NCR2O95944 276 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 IGKV1D-12P01611 117 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 LINC00527Q9UJ94 153 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 ERG28Q9UKR5 140 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 CD5P06127 495 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 WNT2P09544 360 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 TMEM86BQ8N661 226 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 TMEM242Q9NWH2 141 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 FLVCR1-AS1Q8TAF5 88 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 GGTLC1Q9BX51 225 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 TDRD6O60522 2096 aaKnown RBP16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 SRSF4Q08170 494 aaKnown RBP16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 MS4A6AQ9H2W1 248 aa16.3■□□□□ 0.2
KCNMA1-293ENST00000640969 CRYGSP22914 178 aa16.29■□□□□ 0.2
KCNMA1-293ENST00000640969 MBNL3Q9NUK0 354 aaKnown RBP16.29■□□□□ 0.2
KCNMA1-293ENST00000640969 SMPXQ9UHP9 88 aa16.29■□□□□ 0.2
KCNMA1-293ENST00000640969 ZNF415Q09FC8 603 aa16.29■□□□□ 0.2
KCNMA1-293ENST00000640969 S100A7L2Q5SY68 101 aa16.29■□□□□ 0.2
KCNMA1-293ENST00000640969 AMBPP02760 352 aa16.29■□□□□ 0.2
KCNMA1-293ENST00000640969 RPL15P61313 204 aaKnown RBP16.29■□□□□ 0.2
KCNMA1-293ENST00000640969 LTBP4Q8N2S1 1624 aa16.29■□□□□ 0.2
KCNMA1-293ENST00000640969 TRAV41A0A0B4J266 112 aa16.29■□□□□ 0.2
KCNMA1-293ENST00000640969 TRAV40A0A0B4J280 105 aa16.29■□□□□ 0.2
KCNMA1-293ENST00000640969 D6R8Y8 96 aa16.29■□□□□ 0.2
KCNMA1-293ENST00000640969 SRSF7Q16629 238 aaKnown RBP eCLIP16.29■□□□□ 0.2
KCNMA1-293ENST00000640969 TNFSF13O75888 250 aa16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 TNFRSF14Q92956 283 aa16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 NSUN5P1Q3KNT7 163 aa16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 MORN3Q6PF18 240 aaPredicted RBP16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 VGLL1Q99990 258 aa16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 POLR2AP24928 1970 aaKnown RBP16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 TMEM8BA6NDV4 472 aa16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 PMS2P5A8MQ11 134 aa16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 C10orf55Q5SWW7 151 aa16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 DMRTC2Q8IXT2 367 aaPredicted RBP16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 EXOC3-AS1Q8N2X6 119 aa16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 SCN2AQ99250 2005 aa16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 TRBV24-1A0A075B6N3 115 aa16.28■□□□□ 0.2
KCNMA1-293ENST00000640969 IGHV2-26A0A0B4J1V2 119 aa16.27■□□□□ 0.2
KCNMA1-293ENST00000640969 SLC25A48Q6ZT89 311 aaKnown RBP16.27■□□□□ 0.2
KCNMA1-293ENST00000640969 C11orf44Q8N8P7 122 aa16.27■□□□□ 0.2
KCNMA1-293ENST00000640969 SCRT1Q9BWW7 348 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms