RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 APOHP02749 345 aaPredicted RBP20.04■□□□□ 0.8
VEGFA-231ENST00000640499 GPX4P36969 197 aaPredicted RBP20.04■□□□□ 0.8
VEGFA-231ENST00000640499 GAMTQ14353 236 aa20.04■□□□□ 0.8
VEGFA-231ENST00000640499 ETFRF1Q6IPR1 90 aa20.04■□□□□ 0.8
VEGFA-231ENST00000640499 HUWE1Q7Z6Z7 4374 aaKnown RBP20.04■□□□□ 0.8
VEGFA-231ENST00000640499 TRAV30A0A087WSZ9 112 aa20.03■□□□□ 0.8
VEGFA-231ENST00000640499 H3BP45 60 aa20.03■□□□□ 0.8
VEGFA-231ENST00000640499 CHEK1O14757 476 aa20.03■□□□□ 0.8
VEGFA-231ENST00000640499 SCAF4O95104 1147 aaKnown RBP20.03■□□□□ 0.8
VEGFA-231ENST00000640499 CD7P09564 240 aa20.03■□□□□ 0.8
VEGFA-231ENST00000640499 OR10J1P30954 320 aa20.03■□□□□ 0.8
VEGFA-231ENST00000640499 LILRB2Q8N423 598 aa20.03■□□□□ 0.8
VEGFA-231ENST00000640499 ACY3Q96HD9 319 aa20.03■□□□□ 0.8
VEGFA-231ENST00000640499 MARVELD1Q9BSK0 173 aa20.03■□□□□ 0.8
VEGFA-231ENST00000640499 GSKIPQ9P0R6 139 aa20.03■□□□□ 0.8
VEGFA-231ENST00000640499 IGKV1D-37A0A075B6S9 117 aa20.02■□□□□ 0.8
VEGFA-231ENST00000640499 TRAV14DV4A0A0A6YYC5 116 aa20.02■□□□□ 0.8
VEGFA-231ENST00000640499 MBPP02686 304 aaPredicted RBP20.02■□□□□ 0.8
VEGFA-231ENST00000640499 DCTN2Q13561 401 aaKnown RBP20.02■□□□□ 0.8
VEGFA-231ENST00000640499 GUCA2BQ16661 112 aa20.02■□□□□ 0.8
VEGFA-231ENST00000640499 SPANXN5Q5MJ07 72 aa20.02■□□□□ 0.8
VEGFA-231ENST00000640499 OR1S2Q8NGQ3 325 aa20.02■□□□□ 0.8
VEGFA-231ENST00000640499 RHPN1-AS1Q9BWJ2 59 aa20.02■□□□□ 0.8
VEGFA-231ENST00000640499 RCL1Q9Y2P8 373 aaKnown RBP20.02■□□□□ 0.8
VEGFA-231ENST00000640499 IGHV3OR16-13A0A075B7E8 117 aa20.01■□□□□ 0.79
VEGFA-231ENST00000640499 IGHV3-74A0A0B4J1X5 117 aa20.01■□□□□ 0.79
VEGFA-231ENST00000640499 PMS2P5A8MQ11 134 aa20.01■□□□□ 0.79
VEGFA-231ENST00000640499 INMT-MINDY4F8WBC2 141 aa20.01■□□□□ 0.79
VEGFA-231ENST00000640499 SSSCA1O60232 199 aa20.01■□□□□ 0.79
VEGFA-231ENST00000640499 YPEL3P61236 119 aaPredicted RBP20.01■□□□□ 0.79
VEGFA-231ENST00000640499 IL15RAQ13261 267 aa20.01■□□□□ 0.79
VEGFA-231ENST00000640499 SMIM8Q96KF7 97 aa20.01■□□□□ 0.79
VEGFA-231ENST00000640499 RNF2Q99496 336 aa20.01■□□□□ 0.79
VEGFA-231ENST00000640499 C19orf73Q9NVV2 129 aa20.01■□□□□ 0.79
VEGFA-231ENST00000640499 TRAV25A0A0B4J276 109 aa20■□□□□ 0.79
VEGFA-231ENST00000640499 SCGB1D2O95969 90 aa20■□□□□ 0.79
VEGFA-231ENST00000640499 IGHV4-30-4P0DP06 118 aa20■□□□□ 0.79
VEGFA-231ENST00000640499 RAB11AP62491 216 aa20■□□□□ 0.79
VEGFA-231ENST00000640499 PAIP2BQ9ULR5 123 aaKnown RBP20■□□□□ 0.79
VEGFA-231ENST00000640499 A8MZ25 164 aa19.99■□□□□ 0.79
VEGFA-231ENST00000640499 FRMD6-AS1P0C7T7 363 aa19.99■□□□□ 0.79
VEGFA-231ENST00000640499 DEFA1P59665 94 aa19.99■□□□□ 0.79
VEGFA-231ENST00000640499 DEFA3P59666 94 aa19.99■□□□□ 0.79
VEGFA-231ENST00000640499 FAM90A2PQ658T7 463 aa19.99■□□□□ 0.79
VEGFA-231ENST00000640499 NEURL2Q9BR09 285 aa19.99■□□□□ 0.79
VEGFA-231ENST00000640499 VSIRQ9H7M9 311 aa19.99■□□□□ 0.79
VEGFA-231ENST00000640499 PSENENQ9NZ42 101 aa19.99■□□□□ 0.79
VEGFA-231ENST00000640499 IGKV1OR2-108A0A075B7D4 117 aa19.98■□□□□ 0.79
VEGFA-231ENST00000640499 FAM25EA8MYX2 175 aa19.98■□□□□ 0.79
VEGFA-231ENST00000640499 CCNKO75909 580 aa19.98■□□□□ 0.79
VEGFA-231ENST00000640499 CD81P60033 236 aa19.98■□□□□ 0.79
VEGFA-231ENST00000640499 ST8SIA2Q92186 375 aa19.98■□□□□ 0.79
VEGFA-231ENST00000640499 C2orf50Q96LR7 162 aa19.98■□□□□ 0.79
VEGFA-231ENST00000640499 ASCL2Q99929 193 aa19.98■□□□□ 0.79
VEGFA-231ENST00000640499 WFDC10AQ9H1F0 79 aa19.98■□□□□ 0.79
VEGFA-231ENST00000640499 C11orf1Q9H5F2 150 aa19.98■□□□□ 0.79
VEGFA-231ENST00000640499 STRAPQ9Y3F4 350 aaKnown RBP19.98■□□□□ 0.79
VEGFA-231ENST00000640499 TSPAN4O14817 238 aa19.97■□□□□ 0.79
VEGFA-231ENST00000640499 RPP30P78346 268 aaKnown RBP19.97■□□□□ 0.79
VEGFA-231ENST00000640499 TMEM14EPQ6UXP3 125 aa19.97■□□□□ 0.79
VEGFA-231ENST00000640499 GTSCR1Q86UQ5 136 aa19.97■□□□□ 0.79
VEGFA-231ENST00000640499 SBSPONQ8IVN8 264 aa19.97■□□□□ 0.79
VEGFA-231ENST00000640499 GINS3Q9BRX5 216 aa19.97■□□□□ 0.79
VEGFA-231ENST00000640499 IGHV3-66A0A0C4DH42 116 aa19.96■□□□□ 0.79
VEGFA-231ENST00000640499 C5orf51A6NDU8 294 aa19.96■□□□□ 0.79
VEGFA-231ENST00000640499 SNRPGP15A8MWD9 76 aa19.96■□□□□ 0.79
VEGFA-231ENST00000640499 TOMM40O96008 361 aa19.96■□□□□ 0.79
VEGFA-231ENST00000640499 ZNF90Q03938 601 aa19.96■□□□□ 0.79
VEGFA-231ENST00000640499 RBPMS2Q6ZRY4 209 aaKnown RBP19.96■□□□□ 0.79
VEGFA-231ENST00000640499 C7orf66A4D0T2 115 aa19.95■□□□□ 0.78
VEGFA-231ENST00000640499 K7EPK0 472 aa19.95■□□□□ 0.78
VEGFA-231ENST00000640499 PSG1P11464 419 aa19.95■□□□□ 0.78
VEGFA-231ENST00000640499 CRYBB3P26998 211 aa19.95■□□□□ 0.78
VEGFA-231ENST00000640499 USF2Q15853 346 aaPredicted RBP19.95■□□□□ 0.78
VEGFA-231ENST00000640499 Q8WTZ3 238 aa19.95■□□□□ 0.78
VEGFA-231ENST00000640499 SLC35E1Q96K37 410 aa19.95■□□□□ 0.78
VEGFA-231ENST00000640499 RAB40CQ96S21 281 aa19.95■□□□□ 0.78
VEGFA-231ENST00000640499 GPN1Q9HCN4 374 aaPredicted RBP19.95■□□□□ 0.78
VEGFA-231ENST00000640499 U3KQE9 123 aa19.95■□□□□ 0.78
VEGFA-231ENST00000640499 PRAF2O60831 178 aa19.94■□□□□ 0.78
VEGFA-231ENST00000640499 RD3LP0DJH9 198 aa19.94■□□□□ 0.78
VEGFA-231ENST00000640499 TAS2R30P59541 319 aa19.94■□□□□ 0.78
VEGFA-231ENST00000640499 DEFB125Q8N687 156 aa19.94■□□□□ 0.78
VEGFA-231ENST00000640499 THAP8Q8NA92 274 aa19.94■□□□□ 0.78
VEGFA-231ENST00000640499 SPAG8Q99932 426 aaPredicted RBP19.94■□□□□ 0.78
VEGFA-231ENST00000640499 TSC22D2O75157 780 aa19.93■□□□□ 0.78
VEGFA-231ENST00000640499 SCGB2A1O75556 95 aa19.93■□□□□ 0.78
VEGFA-231ENST00000640499 SIX6O95475 246 aa19.93■□□□□ 0.78
VEGFA-231ENST00000640499 NPPCP23582 126 aa19.93■□□□□ 0.78
VEGFA-231ENST00000640499 ARL16Q0P5N6 197 aa19.93■□□□□ 0.78
VEGFA-231ENST00000640499 GSG1LQ6UXU4 331 aa19.93■□□□□ 0.78
VEGFA-231ENST00000640499 DFFBO76075 338 aa19.92■□□□□ 0.78
VEGFA-231ENST00000640499 METTL15P1P0C7V9 234 aa19.92■□□□□ 0.78
VEGFA-231ENST00000640499 LAMTOR1Q6IAA8 161 aa19.92■□□□□ 0.78
VEGFA-231ENST00000640499 LINC00322Q6ZN03 302 aaPredicted RBP19.92■□□□□ 0.78
VEGFA-231ENST00000640499 ACOT7LQ6ZUV0 252 aa19.92■□□□□ 0.78
VEGFA-231ENST00000640499 LSM5Q9Y4Y9 91 aaKnown RBP19.92■□□□□ 0.78
VEGFA-231ENST00000640499 ZFP92A6NM28 416 aa19.91■□□□□ 0.78
VEGFA-231ENST00000640499 OR11H12B2RN74 326 aa19.91■□□□□ 0.78
VEGFA-231ENST00000640499 IL4P05112 153 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms