RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 DUSP14O95147 198 aaKnown RBP12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 EFNB3Q15768 340 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 FAM166AQ6J272 317 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 KIR3DL3Q8N743 410 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 VGLL1Q99990 258 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 CRYGSP22914 178 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 PAX8Q06710 450 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 Q5PR19 223 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 LY6G6FQ5SQ64 297 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 SERF1AO75920 110 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 GTF3AQ92664 365 aaKnown RBP12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 PGPEP1Q9NXJ5 209 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 IGKV1-12A0A0C4DH73 117 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 IGKV1D-12P01611 117 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 EVI2AP22794 236 aa12.19□□□□□ -0.46
HNRNPU-226ENST00000640218 CACNA1EQ15878 2313 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 FREM3P0C091 2139 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 SELLP14151 372 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 GFI1Q99684 422 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 AKAP6Q13023 2319 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 IFI27P40305 119 aaPredicted RBP12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 CRIPAKQ8N1N5 446 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 NEUROG3Q9Y4Z2 214 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 PGPEP1LA6NFU8 196 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 TYMSP04818 313 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 LINC00469Q8N7U9 141 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 TMEM219Q86XT9 240 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 ZNF257Q9Y2Q1 563 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 RBMY1BA6NDE4 496 aaKnown RBP12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 RBMY1EA6NEQ0 496 aaKnown RBP12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 H0YIZ8 118 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 RBMY1DP0C7P1 496 aaKnown RBP12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 RBMY1A1P0DJD3 496 aaKnown RBP12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 RBMY1CP0DJD4 496 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 VMO1Q7Z5L0 202 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 COQ2Q96H96 371 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 CRIM1Q9NZV1 1036 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 TRGV4A0A0C4DH28 118 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 WFDC1Q9HC57 220 aa12.18□□□□□ -0.46
HNRNPU-226ENST00000640218 IGHV2-26A0A0B4J1V2 119 aa12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 A0A1B0GWB2 263 aa12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 TIMP3P35625 211 aa12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 KLRD1Q13241 179 aa12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 NRN1Q9NPD7 142 aa12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 INTS1Q8N201 2190 aaKnown RBP12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 TRAV5A0A0B4J249 113 aa12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 TMEM200BQ69YZ2 307 aa12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 PLSCR4Q9NRQ2 329 aa12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 MST1P26927 711 aa12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 SIGLEC15Q6ZMC9 328 aa12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 ID3Q02535 119 aa12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 OCC1Q8TAD7 63 aa12.17□□□□□ -0.46
HNRNPU-226ENST00000640218 SAP30O75446 220 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 ZNF415Q09FC8 603 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 C10orf126Q8N4M7 172 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 A0A1W2PRE2 83 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 SRSF1Q07955 248 aaKnown RBP eCLIP12.16□□□□□ -0.468e-8■■□□□ 11.4
HNRNPU-226ENST00000640218 C10orf55Q5SWW7 151 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 NUDT10Q8NFP7 164 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 NABP1Q96AH0 204 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 VSIRQ9H7M9 311 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 NAPSAO96009 420 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 Q96MF0 132 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 A0A0G2JMZ2 1700 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 LRRC37A2A6NM11 1700 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 TRAV41A0A0B4J266 112 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 PSMG4Q5JS54 123 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 TNFRSF14Q92956 283 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 ANK1P16157 1881 aa12.16□□□□□ -0.46
HNRNPU-226ENST00000640218 FAM90A9PA6NNJ1 464 aa12.15□□□□□ -0.46
HNRNPU-226ENST00000640218 LINC00614P0C842 121 aa12.15□□□□□ -0.46
HNRNPU-226ENST00000640218 C1QL4Q86Z23 238 aa12.15□□□□□ -0.46
HNRNPU-226ENST00000640218 BEND2Q8NDZ0 799 aa12.15□□□□□ -0.46
HNRNPU-226ENST00000640218 OSTCQ9NRP0 149 aa12.15□□□□□ -0.46
HNRNPU-226ENST00000640218 FER1L5A0AVI2 2057 aa12.15□□□□□ -0.46
HNRNPU-226ENST00000640218 PRDM13Q9H4Q3 707 aa12.15□□□□□ -0.46
HNRNPU-226ENST00000640218 IGKV1-27A0A075B6S5 117 aa12.15□□□□□ -0.47
HNRNPU-226ENST00000640218 NPIPB5A8MRT5 1133 aa12.15□□□□□ -0.47
HNRNPU-226ENST00000640218 SRRM5B3KS81 715 aa12.15□□□□□ -0.47
HNRNPU-226ENST00000640218 CA1P00915 261 aaPredicted RBP12.15□□□□□ -0.47
HNRNPU-226ENST00000640218 TMEM170AQ8WVE7 144 aa12.15□□□□□ -0.47
HNRNPU-226ENST00000640218 MBNL3Q9NUK0 354 aaKnown RBP12.15□□□□□ -0.47
HNRNPU-226ENST00000640218 Q0VFX4 171 aa12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 RPUSD1Q9UJJ7 312 aaKnown RBP12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 TRPM7Q96QT4 1865 aa12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 RNF223E7ERA6 249 aa12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 SEPSECSQ9HD40 501 aaKnown RBP12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 F8VVB4 439 aa12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 F8VWA3 439 aa12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 RPL15P61313 204 aaKnown RBP12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 IGKV2-40A0A087WW87 121 aaPredicted RBP12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 IGKV2D-40P01614 121 aaPredicted RBP12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 IGHV1-8P0DP01 117 aa12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 SFTA2Q6UW10 78 aa12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 TMEM178BH3BS89 294 aa12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 C15orf32Q32M92 178 aa12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 SPCS1Q9Y6A9 102 aa12.14□□□□□ -0.47
HNRNPU-226ENST00000640218 TRGV11A0A075B6L2 103 aa12.13□□□□□ -0.47
HNRNPU-226ENST00000640218 HBDP02042 147 aa12.13□□□□□ -0.47
HNRNPU-226ENST00000640218 CYSLTR1Q9Y271 337 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms