RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 PIEZO1Q92508 2521 aa9.07□□□□□ -0.96
SCN1B-208ENST00000640135 MDC1Q14676 2089 aaKnown RBP9.07□□□□□ -0.96
SCN1B-208ENST00000640135 LINC00587B1AMM8 73 aa9.07□□□□□ -0.96
SCN1B-208ENST00000640135 H0YJW9 148 aa9.07□□□□□ -0.96
SCN1B-208ENST00000640135 RNF224P0DH78 156 aa9.07□□□□□ -0.96
SCN1B-208ENST00000640135 LHFPL1Q86WI0 220 aa9.07□□□□□ -0.96
SCN1B-208ENST00000640135 NR2C2APQ86WQ0 139 aa9.07□□□□□ -0.96
SCN1B-208ENST00000640135 PROK2Q9HC23 129 aa9.07□□□□□ -0.96
SCN1B-208ENST00000640135 ZNF585BQ52M93 769 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 BRD3OSQ6XYD6 125 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 REC114Q7Z4M0 266 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 DOPEY2Q9Y3R5 2298 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 DIRC3C9JPN6 131 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 CD55P08174 381 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 FREM3P0C091 2139 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 SIGLEC15Q6ZMC9 328 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 MIR17HGQ75NE6 70 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 TDGF1P13385 188 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 KLRD1Q13241 179 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 FER1L6-AS1Q8NA97 138 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 RPP21Q9H633 154 aaKnown RBP9.06□□□□□ -0.96
SCN1B-208ENST00000640135 GSN-AS1Q9NRJ2 163 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 TFF1P04155 84 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 SAA4P35542 130 aa9.06□□□□□ -0.96
SCN1B-208ENST00000640135 BDP1A6H8Y1 2624 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 LGALS3P17931 250 aaKnown RBP9.05□□□□□ -0.96
SCN1B-208ENST00000640135 RNASE4P34096 147 aaKnown RBP9.05□□□□□ -0.96
SCN1B-208ENST00000640135 TMEM219Q86XT9 240 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 PIP4P2Q8N4L2 257 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 TRGV9Q99603 122 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 C2orf88Q9BSF0 95 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 IGLV1-44P01699 117 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 PRB3Q04118 309 aaPredicted RBP9.05□□□□□ -0.96
SCN1B-208ENST00000640135 C9orf139Q6ZV77 190 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 RARRES2Q99969 163 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 SIGLEC9Q9Y336 463 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 DMRT1Q9Y5R6 373 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 KLF2Q9Y5W3 355 aaPredicted RBP9.05□□□□□ -0.96
SCN1B-208ENST00000640135 POLEQ07864 2286 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 PCNX2A6NKB5 2137 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 CUL9Q8IWT3 2517 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 CFHR2P36980 270 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 CACNG7P62955 275 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 NEUROG1Q92886 237 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 COQ2Q96H96 371 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 IGHV1-69DA0A0B4J2H0 117 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 ATP5LO75964 103 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 IGHV1-69P01742 117 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 CD33P20138 364 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 LMO1P25800 156 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 OR4D5Q8NGN0 318 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 Q96MF0 132 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 EPDR1Q9UM22 224 aa9.05□□□□□ -0.96
SCN1B-208ENST00000640135 F11RQ9Y624 299 aaKnown RBP9.05□□□□□ -0.96
SCN1B-208ENST00000640135 MED12Q93074 2177 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 IGHV3OR16-8A0A075B7F1 116 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 CCL20P78556 96 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 FAM215AQ9Y5M1 114 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 LINC01549A6NIU2 74 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 PRSS2P07478 247 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 FOLR2P14207 255 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 SUMO2P61956 95 aaKnown RBP9.04□□□□□ -0.96
SCN1B-208ENST00000640135 IL36BQ9NZH7 164 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 TRAV34A0A0B4J273 112 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 HTN3P15516 51 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 TMEM136Q6ZRR5 245 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 C11orf44Q8N8P7 122 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 RAB37Q96AX2 223 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 GFI1Q99684 422 aa9.04□□□□□ -0.96
SCN1B-208ENST00000640135 IGHV2-70DA0A0C4DH43 119 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 H3BRM9 83 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 EIF3GO75821 320 aaKnown RBP eCLIP9.03□□□□□ -0.96
SCN1B-208ENST00000640135 CD7P09564 240 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 GATA2P23769 480 aaPredicted RBP9.03□□□□□ -0.96
SCN1B-208ENST00000640135 PKDREJQ9NTG1 2253 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 IGLV3-9A0A075B6K5 115 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 IGKV1D-8A0A087WSZ0 117 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 SRIP30626 198 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 ZNF562Q6V9R5 426 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 PUSL1Q8N0Z8 303 aaKnown RBP9.03□□□□□ -0.96
SCN1B-208ENST00000640135 FHITP49789 147 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 MEIG1Q5JSS6 88 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 LYPD2Q6UXB3 125 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 PRELID3AQ96N28 172 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 NMUP48645 174 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 CR1LQ2VPA4 569 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 LINC00527Q9UJ94 153 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 USF3Q68DE3 2245 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 SRCAPQ6ZRS2 3230 aa9.03□□□□□ -0.96
SCN1B-208ENST00000640135 HEATR1Q9H583 2144 aaKnown RBP9.03□□□□□ -0.96
SCN1B-208ENST00000640135 KIR3DL3Q8N743 410 aa9.02□□□□□ -0.96
SCN1B-208ENST00000640135 KLHL30-AS1Q8NEE0 82 aa9.02□□□□□ -0.96
SCN1B-208ENST00000640135 OR4C5Q8NGB2 326 aa9.02□□□□□ -0.96
SCN1B-208ENST00000640135 A0A087WV48 116 aa9.02□□□□□ -0.97
SCN1B-208ENST00000640135 FNDC10F2Z333 226 aa9.02□□□□□ -0.97
SCN1B-208ENST00000640135 F8VVB4 439 aa9.02□□□□□ -0.97
SCN1B-208ENST00000640135 F8VWA3 439 aa9.02□□□□□ -0.97
SCN1B-208ENST00000640135 UQCRFS1P47985 274 aa9.02□□□□□ -0.97
SCN1B-208ENST00000640135 RPRMLQ8N4K4 120 aa9.02□□□□□ -0.97
SCN1B-208ENST00000640135 PEF1Q9UBV8 284 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms