RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 WFDC10AQ9H1F0 79 aa16.35■□□□□ 0.21
SCN1B-206ENST00000638536 SMPXQ9UHP9 88 aa16.35■□□□□ 0.21
SCN1B-206ENST00000638536 NBEAL2Q6ZNJ1 2754 aa16.35■□□□□ 0.21
SCN1B-206ENST00000638536 IGHV7-4-1A0A0J9YVY3 117 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 IGHV4-30-4P0DP06 118 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 SLC25A4P12235 298 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 NKX2-1P43699 371 aaPredicted RBP16.34■□□□□ 0.21
SCN1B-206ENST00000638536 DCTN2Q13561 401 aaKnown RBP16.34■□□□□ 0.21
SCN1B-206ENST00000638536 LILRB2Q8N423 598 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 ZBTB8BQ8NAP8 495 aaPredicted RBP16.34■□□□□ 0.21
SCN1B-206ENST00000638536 GSKIPQ9P0R6 139 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 PAIP2BQ9ULR5 123 aaKnown RBP16.34■□□□□ 0.21
SCN1B-206ENST00000638536 CHEK1O14757 476 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 FRMD6-AS1P0C7T7 363 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 C12orf45Q8N5I9 185 aaPredicted RBP16.34■□□□□ 0.21
SCN1B-206ENST00000638536 RNF2Q99496 336 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 RHPN1-AS1Q9BWJ2 59 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 TRAV14DV4A0A0A6YYC5 116 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 PRSS46E5RG02 174 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 SCGB1D2O95969 90 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 OR10J1P30954 320 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 PAX9P55771 341 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 CD81P60033 236 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 GAMTQ14353 236 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 SPANXN5Q5MJ07 72 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 IGHV3-66A0A0C4DH42 116 aa16.32■□□□□ 0.2
SCN1B-206ENST00000638536 SSSCA1O60232 199 aa16.32■□□□□ 0.2
SCN1B-206ENST00000638536 ETFRF1Q6IPR1 90 aa16.32■□□□□ 0.2
SCN1B-206ENST00000638536 GTSCR1Q86UQ5 136 aa16.32■□□□□ 0.2
SCN1B-206ENST00000638536 SBSPONQ8IVN8 264 aa16.32■□□□□ 0.2
SCN1B-206ENST00000638536 CIB3Q96Q77 187 aaPredicted RBP16.32■□□□□ 0.2
SCN1B-206ENST00000638536 NEURL2Q9BR09 285 aa16.32■□□□□ 0.2
SCN1B-206ENST00000638536 STAB2Q8WWQ8 2551 aa16.31■□□□□ 0.2
SCN1B-206ENST00000638536 TRAV30A0A087WSZ9 112 aa16.31■□□□□ 0.2
SCN1B-206ENST00000638536 ATP5IP56385 69 aaPredicted RBP16.31■□□□□ 0.2
SCN1B-206ENST00000638536 OR1S2Q8NGQ3 325 aa16.31■□□□□ 0.2
SCN1B-206ENST00000638536 ST8SIA2Q92186 375 aa16.31■□□□□ 0.2
SCN1B-206ENST00000638536 C19orf73Q9NVV2 129 aa16.31■□□□□ 0.2
SCN1B-206ENST00000638536 IGKV1D-37A0A075B6S9 117 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 FAM25EA8MYX2 175 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 MBPP02686 304 aaPredicted RBP16.3■□□□□ 0.2
SCN1B-206ENST00000638536 IL5P05113 134 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 GPX4P36969 197 aaPredicted RBP16.3■□□□□ 0.2
SCN1B-206ENST00000638536 RBPMS2Q6ZRY4 209 aaKnown RBP16.3■□□□□ 0.2
SCN1B-206ENST00000638536 DEFB125Q8N687 156 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 RCL1Q9Y2P8 373 aaKnown RBP16.3■□□□□ 0.2
SCN1B-206ENST00000638536 CCNKO75909 580 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 RAB11AP62491 216 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 PSENENQ9NZ42 101 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 IGKV1OR2-108A0A075B7D4 117 aa16.29■□□□□ 0.2
SCN1B-206ENST00000638536 TRAV25A0A0B4J276 109 aa16.29■□□□□ 0.2
SCN1B-206ENST00000638536 TSPAN4O14817 238 aa16.29■□□□□ 0.2
SCN1B-206ENST00000638536 YPEL3P61236 119 aaPredicted RBP16.29■□□□□ 0.2
SCN1B-206ENST00000638536 FAM90A2PQ658T7 463 aa16.29■□□□□ 0.2
SCN1B-206ENST00000638536 GINS3Q9BRX5 216 aa16.29■□□□□ 0.2
SCN1B-206ENST00000638536 PMS2P5A8MQ11 134 aa16.28■□□□□ 0.2
SCN1B-206ENST00000638536 INMT-MINDY4F8WBC2 141 aa16.28■□□□□ 0.2
SCN1B-206ENST00000638536 ZNF90Q03938 601 aa16.28■□□□□ 0.2
SCN1B-206ENST00000638536 SMIM8Q96KF7 97 aa16.28■□□□□ 0.2
SCN1B-206ENST00000638536 VSIRQ9H7M9 311 aa16.28■□□□□ 0.2
SCN1B-206ENST00000638536 STRAPQ9Y3F4 350 aaKnown RBP16.28■□□□□ 0.2
SCN1B-206ENST00000638536 IGKV3-7A0A075B6H7 116 aa16.27■□□□□ 0.2
SCN1B-206ENST00000638536 C5orf51A6NDU8 294 aa16.27■□□□□ 0.2
SCN1B-206ENST00000638536 A8MZ25 164 aa16.27■□□□□ 0.2
SCN1B-206ENST00000638536 USF2Q15853 346 aaPredicted RBP16.27■□□□□ 0.2
SCN1B-206ENST00000638536 SLC35E1Q96K37 410 aa16.27■□□□□ 0.2
SCN1B-206ENST00000638536 MARVELD1Q9BSK0 173 aa16.27■□□□□ 0.2
SCN1B-206ENST00000638536 OR11H12B2RN74 326 aa16.27■□□□□ 0.19
SCN1B-206ENST00000638536 PSG1P11464 419 aa16.27■□□□□ 0.19
SCN1B-206ENST00000638536 CRYBB3P26998 211 aa16.27■□□□□ 0.19
SCN1B-206ENST00000638536 RPP30P78346 268 aaKnown RBP16.27■□□□□ 0.19
SCN1B-206ENST00000638536 Q8WTZ3 238 aa16.27■□□□□ 0.19
SCN1B-206ENST00000638536 C7orf66A4D0T2 115 aa16.26■□□□□ 0.19
SCN1B-206ENST00000638536 TOMM40O96008 361 aa16.26■□□□□ 0.19
SCN1B-206ENST00000638536 NPPCP23582 126 aa16.26■□□□□ 0.19
SCN1B-206ENST00000638536 DEFA1P59665 94 aa16.26■□□□□ 0.19
SCN1B-206ENST00000638536 DEFA3P59666 94 aa16.26■□□□□ 0.19
SCN1B-206ENST00000638536 IL15RAQ13261 267 aa16.26■□□□□ 0.19
SCN1B-206ENST00000638536 SPAG8Q99932 426 aaPredicted RBP16.26■□□□□ 0.19
SCN1B-206ENST00000638536 ZFP92A6NM28 416 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 SCGB2A1O75556 95 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 DFFBO76075 338 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 IL4P05112 153 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 RD3LP0DJH9 198 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 LAMTOR1Q6IAA8 161 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 OR8G2PQ6IF36 304 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 TMEM14EPQ6UXP3 125 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 C2orf50Q96LR7 162 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 CITED4Q96RK1 184 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 UBQLN2Q9UHD9 624 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 LSM5Q9Y4Y9 91 aaKnown RBP16.25■□□□□ 0.19
SCN1B-206ENST00000638536 K7EPK0 472 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 SIX6O95475 246 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 METTL15P1P0C7V9 234 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 TFPI2P48307 235 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 ACOT7LQ6ZUV0 252 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 TCF24Q7RTU0 167 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 GBGT1Q8N5D6 347 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 METTL26Q96S19 204 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 RAB40CQ96S21 281 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms