RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 SCGB2A1O75556 95 aa8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 ATG12O94817 140 aa8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 CD3DP04234 171 aa8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 HNRNPCP07910 306 aaKnown RBP eCLIP8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 EIF2B2P49770 351 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 YPEL3P61236 119 aaPredicted RBP8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 NCS1P62166 190 aa8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 DHODHQ02127 395 aa8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 TRIM16LQ309B1 348 aa8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 LGALS9BQ3B8N2 356 aa8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 RNASE10Q5GAN6 216 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 ZNF705AQ6ZN79 300 aaPredicted RBP8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 ARRDC1Q8N5I2 433 aa8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 OR1S2Q8NGQ3 325 aa8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 TMEM170AQ8WVE7 144 aa8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 SEPSECSQ9HD40 501 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 ENY2Q9NPA8 101 aa8.68□□□□□ -1.02
CACNA1A-250ENST00000637809 RPS10-NUDT3A0A1W2PQS6 291 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 ZNF705FA8MVS1 300 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 BUB3O43684 328 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 NXPH3O95157 252 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 CD74P04233 296 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 ZNF705DP0CH99 300 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 ZNF705BP0CI00 300 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 OR10J1P30954 320 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 HTR2BP41595 481 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 RND2P52198 227 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 AP2S1P53680 142 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 SPCS3P61009 180 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 C2orf83Q53S99 150 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 RNASE12Q5GAN4 147 aaKnown RBP8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 OR4D10Q8NGI6 311 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 OR13C8Q8NGS7 320 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 OR52E5Q8NH55 327 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 Q8WTZ3 238 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 RRNAD1Q96FB5 475 aaKnown RBP8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 NEU1Q99519 415 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 C1QTNF4Q9BXJ3 329 aa8.67□□□□□ -1.02
CACNA1A-250ENST00000637809 APOBP04114 4563 aaKnown RBP8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 CDS2O95674 445 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 SLC25A4P12235 298 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 HLA-DRB4P13762 266 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 TBPP20226 339 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 NPY1RP25929 384 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 NUTF2P61970 127 aaKnown RBP8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 SNRPD3P62318 126 aaKnown RBP8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 Q6ZR54 194 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 OR52I2Q8NH67 350 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 TERB2Q8NHR7 220 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 LHFPL5Q8TAF8 219 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 RNASEH2CQ8TDP1 164 aaKnown RBP8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 NRN1Q9NPD7 142 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 COPZ2Q9P299 210 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 MTFP1Q9UDX5 166 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 HLA-DRB4X5D2U9 266 aa8.66□□□□□ -1.02
CACNA1A-250ENST00000637809 B3GALNT1O75752 331 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 IL4P05112 153 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 SPART-AS1P0CW21 52 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 DEFB1P60022 68 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 VBP1P61758 197 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 GDF5OSQ5U4N7 250 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 SIGLEC15Q6ZMC9 328 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 FAM219AQ8IW50 185 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 CCDC71LQ8N9Z2 235 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 ZFAND1Q8TCF1 268 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 GLYATL2Q8WU03 294 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 NPIPB3Q92617 1050 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 ABHD1Q96SE0 405 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 FUNDC2Q9BWH2 189 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 KRTAP4-5Q9BYR2 181 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 TMEM222Q9H0R3 208 aa8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.65□□□□□ -1.02
CACNA1A-250ENST00000637809 TOMM40O96008 361 aa8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 OR5AC1P0C628 307 aa8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 RD3LP0DJH9 198 aa8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 NKX2-1P43699 371 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 SLC24A4Q8NFF2 622 aa8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 RNASE11Q8TAA1 199 aaKnown RBP8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 MARCH1Q8TCQ1 289 aa8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 GPR146Q96CH1 333 aa8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 FAM210BQ96KR6 192 aa8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 RTBDNQ9BSG5 229 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 HEYLQ9NQ87 328 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 CACNG5Q9UF02 275 aa8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 DNAH5Q8TE73 4624 aa8.64□□□□□ -1.03
CACNA1A-250ENST00000637809 IGLV2-18A0A075B6J9 118 aa8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 A0A087WXM4 84 aa8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 TEX13DA0A0J9YY54 714 aaPredicted RBP8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 TMEM189A5PLL7 270 aa8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 SMIM9A6NGZ8 99 aa8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 IFNA10P01566 189 aa8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 EMP1P54849 157 aa8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 SCGB2B2Q4G0G5 96 aa8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 SELENOHQ8IZQ5 122 aaKnown RBP8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 ZNF709Q8N972 641 aa8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 TMEM229BQ8NBD8 167 aa8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 OR51G1Q8NGK1 321 aa8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 RBPMSQ93062 196 aaKnown RBP8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 WDR12Q9GZL7 423 aaKnown RBP8.63□□□□□ -1.03
CACNA1A-250ENST00000637809 DKK2Q9UBU2 259 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms