RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 OR4X1Q8NH49 305 aa17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 RPUSD4Q96CM3 377 aaKnown RBP17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 ZNF503Q96F45 646 aa17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 RASL11BQ9BPW5 248 aa17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 J3QKU1 62 aa17.08■□□□□ 0.33
CHRNA7-228ENST00000637519 PATE2Q6UY27 113 aa17.08■□□□□ 0.33
CHRNA7-228ENST00000637519 OR5T1Q8NG75 326 aa17.08■□□□□ 0.33
CHRNA7-228ENST00000637519 PIFOQ8TCI5 191 aa17.08■□□□□ 0.33
CHRNA7-228ENST00000637519 C22orf15Q8WYQ4 148 aa17.08■□□□□ 0.33
CHRNA7-228ENST00000637519 C1RLQ9NZP8 487 aa17.08■□□□□ 0.33
CHRNA7-228ENST00000637519 YTHDF2Q9Y5A9 579 aaKnown RBP17.08■□□□□ 0.33
CHRNA7-228ENST00000637519 LINC01548A6NM66 108 aa17.08■□□□□ 0.32
CHRNA7-228ENST00000637519 TMEM249Q2WGJ8 235 aa17.08■□□□□ 0.32
CHRNA7-228ENST00000637519 NIPSNAP3BQ9BS92 247 aa17.08■□□□□ 0.32
CHRNA7-228ENST00000637519 COX7A2P2O60397 106 aa17.07■□□□□ 0.32
CHRNA7-228ENST00000637519 HLA-DRB1P01911 266 aa17.07■□□□□ 0.32
CHRNA7-228ENST00000637519 OR10J4P0C629 311 aa17.07■□□□□ 0.32
CHRNA7-228ENST00000637519 RBM14Q96PK6 669 aaKnown RBP17.07■□□□□ 0.32
CHRNA7-228ENST00000637519 FANCD2OSQ96PS1 177 aa17.07■□□□□ 0.32
CHRNA7-228ENST00000637519 ZANQ9Y493 2812 aa17.07■□□□□ 0.32
CHRNA7-228ENST00000637519 APCP25054 2843 aa17.07■□□□□ 0.32
CHRNA7-228ENST00000637519 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHRNA7-228ENST00000637519 OR7C2O60412 319 aa17.06■□□□□ 0.32
CHRNA7-228ENST00000637519 ORM2P19652 201 aa17.06■□□□□ 0.32
CHRNA7-228ENST00000637519 NPPCP23582 126 aa17.06■□□□□ 0.32
CHRNA7-228ENST00000637519 Q5PR19 223 aa17.06■□□□□ 0.32
CHRNA7-228ENST00000637519 NPIPB5A8MRT5 1133 aa17.06■□□□□ 0.32
CHRNA7-228ENST00000637519 ATP6V0E1O15342 81 aa17.06■□□□□ 0.32
CHRNA7-228ENST00000637519 ECSCRQ19T08 205 aa17.06■□□□□ 0.32
CHRNA7-228ENST00000637519 LINC01356Q8N9X3 169 aa17.06■□□□□ 0.32
CHRNA7-228ENST00000637519 TRGV9Q99603 122 aa17.06■□□□□ 0.32
CHRNA7-228ENST00000637519 DNAJC4Q9NNZ3 241 aa17.06■□□□□ 0.32
CHRNA7-228ENST00000637519 IGLC1P0CG04 106 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 LY6EQ16553 131 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 TIGITQ495A1 244 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 C5orf56Q8N8D9 126 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 OR1B1Q8NGR6 318 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 ISOC2Q96AB3 205 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 SSX3Q99909 188 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 SLC25A2Q9BXI2 301 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 TECRQ9NZ01 308 aaKnown RBP17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 IGLV11-55A0A075B6I3 123 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 TRAV20A0A0B4J274 112 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 MDFIC2A0A1B0GVS7 189 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 ZNF727A8MUV8 499 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 IGHV3-23P01764 117 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 SNRPCP09234 159 aaKnown RBP17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 C10orf113Q5VZT2 155 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 TVP23CQ96ET8 276 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 PARLQ9H300 379 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 ZNF355PQ9NSJ1 428 aa17.05■□□□□ 0.32
CHRNA7-228ENST00000637519 TTC9CQ8N5M4 171 aa17.04■□□□□ 0.32
CHRNA7-228ENST00000637519 FAM167A-AS1Q96KT0 104 aa17.04■□□□□ 0.32
CHRNA7-228ENST00000637519 SMIM7Q9BQ49 75 aa17.04■□□□□ 0.32
CHRNA7-228ENST00000637519 TGFAP01135 160 aa17.03■□□□□ 0.32
CHRNA7-228ENST00000637519 SELENOTP62341 195 aa17.03■□□□□ 0.32
CHRNA7-228ENST00000637519 DERL1Q9BUN8 251 aa17.03■□□□□ 0.32
CHRNA7-228ENST00000637519 BEX4Q9NWD9 120 aaPredicted RBP17.03■□□□□ 0.32
CHRNA7-228ENST00000637519 OR2J3O76001 311 aa17.03■□□□□ 0.32
CHRNA7-228ENST00000637519 C8orf88P0DMB2 117 aa17.03■□□□□ 0.32
CHRNA7-228ENST00000637519 TAGLN2P37802 199 aaKnown RBP17.03■□□□□ 0.32
CHRNA7-228ENST00000637519 RHEBQ15382 184 aa17.03■□□□□ 0.32
CHRNA7-228ENST00000637519 OR5AU1Q8NGC0 362 aa17.03■□□□□ 0.32
CHRNA7-228ENST00000637519 NANPQ8TBE9 248 aa17.03■□□□□ 0.32
CHRNA7-228ENST00000637519 TMUB1Q9BVT8 246 aa17.03■□□□□ 0.32
CHRNA7-228ENST00000637519 G3V318 75 aa17.02■□□□□ 0.32
CHRNA7-228ENST00000637519 TMEM250H0YL14 139 aa17.02■□□□□ 0.32
CHRNA7-228ENST00000637519 IGKV1-17P01599 117 aa17.02■□□□□ 0.32
CHRNA7-228ENST00000637519 AMY1AP04745 511 aa17.02■□□□□ 0.32
CHRNA7-228ENST00000637519 PYYP10082 97 aa17.02■□□□□ 0.32
CHRNA7-228ENST00000637519 PSG1P11464 419 aa17.02■□□□□ 0.32
CHRNA7-228ENST00000637519 BPIFB3P59826 476 aa17.02■□□□□ 0.32
CHRNA7-228ENST00000637519 LINC00305Q7Z4B0 112 aa17.02■□□□□ 0.32
CHRNA7-228ENST00000637519 MEGF9Q9H1U4 602 aa17.02■□□□□ 0.32
CHRNA7-228ENST00000637519 SCO2A0A1W2PP80 73 aa17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 H3BUX3 64 aa17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 UNQ5815/PRO19632Q6UWF5 114 aa17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 OR1L4Q8NGR5 311 aa17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 PFDN5Q99471 154 aa17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 C19orf24Q9BVV8 132 aa17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 CLN5O75503 358 aa17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 NDUFB8O95169 186 aa17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 SGMS2Q8NHU3 365 aa17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 Q96MF0 132 aa17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 PSMG3-AS1Q96PY0 264 aa17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 MRPL32Q9BYC8 188 aaKnown RBP17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 MOB4Q9Y3A3 225 aa17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 HELZ2Q9BYK8 2649 aaKnown RBP17.01■□□□□ 0.31
CHRNA7-228ENST00000637519 TAS2R45P59539 299 aa17■□□□□ 0.31
CHRNA7-228ENST00000637519 LYZP61626 148 aa17■□□□□ 0.31
CHRNA7-228ENST00000637519 LEMD1Q68G75 181 aa17■□□□□ 0.31
CHRNA7-228ENST00000637519 KRTAP1-3Q8IUG1 177 aa17■□□□□ 0.31
CHRNA7-228ENST00000637519 SDF2L1Q9HCN8 221 aa17■□□□□ 0.31
CHRNA7-228ENST00000637519 SMCO4Q9NRQ5 59 aa17■□□□□ 0.31
CHRNA7-228ENST00000637519 LINC00527Q9UJ94 153 aa17■□□□□ 0.31
CHRNA7-228ENST00000637519 NDUFB4O95168 129 aa17■□□□□ 0.31
CHRNA7-228ENST00000637519 LOXL1Q08397 574 aaPredicted RBP17■□□□□ 0.31
CHRNA7-228ENST00000637519 BCL6BQ8N143 479 aaPredicted RBP17■□□□□ 0.31
CHRNA7-228ENST00000637519 OR1L6Q8NGR2 347 aa17■□□□□ 0.31
CHRNA7-228ENST00000637519 ZNF469Q96JG9 3925 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms