RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 MSRB3Q8IXL7 192 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 PIP4P2Q8N4L2 257 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 TMEM52Q8NDY8 209 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 MRPS18CQ9Y3D5 142 aaKnown RBP4.65□□□□□ -1.67
SCN1A-209ENST00000635750 ANK1P16157 1881 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 DANCRP0C864 163 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 CSRP1P21291 193 aaKnown RBP4.65□□□□□ -1.67
SCN1A-209ENST00000635750 IGHV1-2P23083 117 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 EFNA4P52798 201 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 MINOS1Q5TGZ0 78 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 BHLHA9Q7RTU4 235 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 MINOS1-NBL1R4GNA1 71 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 NRXN3Q9Y4C0 1643 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 A0A1B0GV90 55 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 RIPPLY3P57055 190 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 FOXL2P58012 376 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 RND3P61587 244 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 IFITM2Q01629 132 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 FAM216BQ8N7L0 139 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 ZNF114Q8NC26 417 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 C14orf144Q96I85 54 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 CLDN16Q9Y5I7 305 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 SDK2Q58EX2 2172 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 BRCA1P38398 1863 aaKnown RBP4.64□□□□□ -1.67
SCN1A-209ENST00000635750 CACNA1GO43497 2377 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 SCO2A0A1W2PP80 73 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 SNAI2O43623 268 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 F12P00748 615 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-209ENST00000635750 IFI6P09912 130 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 CTAG1AP78358 180 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 TMEM187Q14656 261 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 ASPHD2Q6ICH7 369 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 MARF1Q9Y4F3 1742 aaKnown RBP4.64□□□□□ -1.67
SCN1A-209ENST00000635750 YPEL1O60688 119 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 C8orf82Q6P1X6 216 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-209ENST00000635750 YPEL2Q96QA6 119 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 DKK4Q9UBT3 224 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 LRP5O75197 1615 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 NPIPB13A6NJU9 1138 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 IGHV3-53P01767 116 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 SLC25A16P16260 332 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 TRPM3Q9HCF6 1732 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-209ENST00000635750 DDTP30046 118 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 DUTP33316 252 aaKnown RBP4.64□□□□□ -1.67
SCN1A-209ENST00000635750 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-209ENST00000635750 AMBPP02760 352 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 GATA4P43694 442 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 ZNF876PQ49A33 203 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 PUSL1Q8N0Z8 303 aaKnown RBP4.64□□□□□ -1.67
SCN1A-209ENST00000635750 MRPS18AQ9NVS2 196 aaKnown RBP4.64□□□□□ -1.67
SCN1A-209ENST00000635750 RALGAPA2Q2PPJ7 1873 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 FAM223BA6NKX1 122 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 H0YL77 283 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 SLC17A3O00476 420 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 ESDP10768 282 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 ANXA2RQ3ZCQ2 193 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 TMEM144Q7Z5S9 345 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 FAM223AQ8IWN6 122 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 WNK3Q9BYP7 1800 aa4.64□□□□□ -1.67
SCN1A-209ENST00000635750 NHP2Q9NX24 153 aaKnown RBP4.64□□□□□ -1.67
SCN1A-209ENST00000635750 TRBV5-5A0A0J9YX44 114 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 C1QL1O75973 258 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 IMMP1LQ96LU5 166 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 LINC00477Q96M19 166 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 CHAC1Q9BUX1 264 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 ARID2Q68CP9 1835 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 VCYO14598 125 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 FXYD7P58549 80 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 UBE2E2Q96LR5 201 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 NRTNQ99748 197 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 C5orf66Q9H5L9 145 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 PILRAQ9UKJ1 303 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 COX11Q9Y6N1 276 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 UBR3Q6ZT12 1888 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 SAA2-SAA4A0A096LPE2 208 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 MYMXA0A1B0GTQ4 84 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 MMP23AO75900 390 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 SAA2P0DJI9 122 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-209ENST00000635750 GATA3P23771 443 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 ZFAND6Q6FIF0 208 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 SFTA2Q6UW10 78 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 GTF3AQ92664 365 aaKnown RBP4.63□□□□□ -1.67
SCN1A-209ENST00000635750 WDYHV1Q96HA8 205 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 CFHR5Q9BXR6 569 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 IGLV1-36A0A0B4J1U3 117 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 DEFB130BP0DP73 79 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 DEFB130AP0DP74 79 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 FUT5Q11128 374 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 C15orf32Q32M92 178 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 C4orf48Q5BLP8 95 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 C1orf100Q5SVJ3 147 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 FAM201AQ5SY85 155 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 LIMS2Q7Z4I7 341 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 ATP5L2Q7Z4Y8 100 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 CD24P25063 80 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 CT83Q5H943 113 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 UNQ6494/PRO21346Q6UXR6 183 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 TMEM219Q86XT9 240 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 SMPXQ9UHP9 88 aa4.63□□□□□ -1.67
SCN1A-209ENST00000635750 EPDR1Q9UM22 224 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms