RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 PRM2P04554 102 aa9.14□□□□□ -0.95
LINC00339-206ENST00000634451 IL4P05112 153 aa9.14□□□□□ -0.95
LINC00339-206ENST00000634451 HNRNPCP07910 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
LINC00339-206ENST00000634451 ZNF705DP0CH99 300 aaPredicted RBP9.14□□□□□ -0.95
LINC00339-206ENST00000634451 ZNF705BP0CI00 300 aaPredicted RBP9.14□□□□□ -0.95
LINC00339-206ENST00000634451 ELK1P19419 428 aa9.14□□□□□ -0.95
LINC00339-206ENST00000634451 RND3P61587 244 aa9.14□□□□□ -0.95
LINC00339-206ENST00000634451 TNP2Q05952 138 aa9.14□□□□□ -0.95
LINC00339-206ENST00000634451 FAM222AQ5U5X8 452 aa9.14□□□□□ -0.95
LINC00339-206ENST00000634451 LPCAT3Q6P1A2 487 aa9.14□□□□□ -0.95
LINC00339-206ENST00000634451 LHFPL1Q86WI0 220 aa9.14□□□□□ -0.95
LINC00339-206ENST00000634451 CENPSQ8N2Z9 138 aa9.14□□□□□ -0.95
LINC00339-206ENST00000634451 YIPF6Q96EC8 236 aa9.14□□□□□ -0.95
LINC00339-206ENST00000634451 WDR12Q9GZL7 423 aaKnown RBP9.14□□□□□ -0.95
LINC00339-206ENST00000634451 C3orf85A0A1B0GTC6 90 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 F6UB75 175 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 HPGDSO60760 199 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 HLA-DRB4P13762 266 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 S100GP29377 79 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 OR10J1P30954 320 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 RCVRNP35243 200 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 RPL5P46777 297 aaKnown RBP9.13□□□□□ -0.95
LINC00339-206ENST00000634451 NCS1P62166 190 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 MEF2DQ14814 521 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 TRIM16LQ309B1 348 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 ZNF709Q8N972 641 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 SLC35B3Q9H1N7 401 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 DKK2Q9UBU2 259 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 KLK11Q9UBX7 282 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 HLA-DRB4X5D2U9 266 aa9.13□□□□□ -0.95
LINC00339-206ENST00000634451 CORTO00230 105 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 BUB3O43684 328 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 ATP6V1G2O95670 118 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 CD3DP04234 171 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 SPART-AS1P0CW21 52 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 SUB1P53999 127 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINC00339-206ENST00000634451 FAAP20Q6NZ36 180 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 TMEM88Q6PEY1 159 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 SIGLEC15Q6ZMC9 328 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 OR51G1Q8NGK1 321 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 OR13C8Q8NGS7 320 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 NPIPB3Q92617 1050 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 NARS2Q96I59 477 aaKnown RBP9.12□□□□□ -0.95
LINC00339-206ENST00000634451 PDCD10Q9BUL8 212 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 YTHDF1Q9BYJ9 559 aaKnown RBP9.12□□□□□ -0.95
LINC00339-206ENST00000634451 ENY2Q9NPA8 101 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 NRN1Q9NPD7 142 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 PRR13Q9NZ81 148 aa9.12□□□□□ -0.95
LINC00339-206ENST00000634451 IFNA21P01568 189 aa9.11□□□□□ -0.95
LINC00339-206ENST00000634451 OR5AC1P0C628 307 aa9.11□□□□□ -0.95
LINC00339-206ENST00000634451 UCP1P25874 307 aa9.11□□□□□ -0.95
LINC00339-206ENST00000634451 NPY1RP25929 384 aa9.11□□□□□ -0.95
LINC00339-206ENST00000634451 C1orf158Q8N1D5 194 aa9.11□□□□□ -0.95
LINC00339-206ENST00000634451 OR1S2Q8NGQ3 325 aa9.11□□□□□ -0.95
LINC00339-206ENST00000634451 OR52I2Q8NH67 350 aa9.11□□□□□ -0.95
LINC00339-206ENST00000634451 Q8WTZ3 238 aa9.11□□□□□ -0.95
LINC00339-206ENST00000634451 ACY3Q96HD9 319 aa9.11□□□□□ -0.95
LINC00339-206ENST00000634451 LINC00052Q96N35 136 aa9.11□□□□□ -0.95
LINC00339-206ENST00000634451 SCPEP1Q9HB40 452 aa9.11□□□□□ -0.95
LINC00339-206ENST00000634451 APOA1P02647 267 aa9.1□□□□□ -0.95
LINC00339-206ENST00000634451 YPEL3P61236 119 aaPredicted RBP9.1□□□□□ -0.95
LINC00339-206ENST00000634451 SNRPD3P62318 126 aaKnown RBP9.1□□□□□ -0.95
LINC00339-206ENST00000634451 KCTD21Q4G0X4 260 aa9.1□□□□□ -0.95
LINC00339-206ENST00000634451 C1orf134Q5TEV5 83 aa9.1□□□□□ -0.95
LINC00339-206ENST00000634451 CROCCP3Q8IVE0 287 aa9.1□□□□□ -0.95
LINC00339-206ENST00000634451 SLC24A4Q8NFF2 622 aa9.1□□□□□ -0.95
LINC00339-206ENST00000634451 RNASE11Q8TAA1 199 aaKnown RBP9.1□□□□□ -0.95
LINC00339-206ENST00000634451 MARCH1Q8TCQ1 289 aa9.1□□□□□ -0.95
LINC00339-206ENST00000634451 GPR146Q96CH1 333 aa9.1□□□□□ -0.95
LINC00339-206ENST00000634451 NEU1Q99519 415 aa9.1□□□□□ -0.95
LINC00339-206ENST00000634451 NIPSNAP3BQ9BS92 247 aa9.1□□□□□ -0.95
LINC00339-206ENST00000634451 C1QTNF4Q9BXJ3 329 aa9.1□□□□□ -0.95
LINC00339-206ENST00000634451 CACNG5Q9UF02 275 aa9.1□□□□□ -0.95
LINC00339-206ENST00000634451 YTHDF2Q9Y5A9 579 aaKnown RBP9.1□□□□□ -0.95
LINC00339-206ENST00000634451 C16orf90A8MZG2 172 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 SOCS3O14543 225 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 TMEM127O75204 238 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 PSG1P11464 419 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 SPCS3P61009 180 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 VBP1P61758 197 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 AARDQ4LEZ3 155 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 C2orf83Q53S99 150 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 RNASE10Q5GAN6 216 aaKnown RBP9.09□□□□□ -0.95
LINC00339-206ENST00000634451 OR4B1Q8NGF8 309 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 C20orf173Q96LM9 149 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 PBDC1Q9BVG4 233 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 SAV1Q9H4B6 383 aaPredicted RBP9.09□□□□□ -0.95
LINC00339-206ENST00000634451 HEYLQ9NQ87 328 aaPredicted RBP9.09□□□□□ -0.95
LINC00339-206ENST00000634451 COPZ2Q9P299 210 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 RFNGQ9Y644 331 aa9.09□□□□□ -0.95
LINC00339-206ENST00000634451 TRAV30A0A087WSZ9 112 aa9.08□□□□□ -0.96
LINC00339-206ENST00000634451 LOC102723971A0A1B0GUV8 181 aa9.08□□□□□ -0.96
LINC00339-206ENST00000634451 RPS10-NUDT3A0A1W2PQS6 291 aa9.08□□□□□ -0.96
LINC00339-206ENST00000634451 TOMM40O96008 361 aa9.08□□□□□ -0.96
LINC00339-206ENST00000634451 RD3LP0DJH9 198 aa9.08□□□□□ -0.96
LINC00339-206ENST00000634451 PRB4P10163 310 aaPredicted RBP9.08□□□□□ -0.96
LINC00339-206ENST00000634451 HTR2BP41595 481 aa9.08□□□□□ -0.96
LINC00339-206ENST00000634451 NKX2-1P43699 371 aaPredicted RBP9.08□□□□□ -0.96
LINC00339-206ENST00000634451 EIF2B2P49770 351 aaKnown RBP9.08□□□□□ -0.96
LINC00339-206ENST00000634451 NUTF2P61970 127 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms