RNA–Protein interactions for RNA: ENST00000633295.1

LINC01002-225, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 3

Gene LINC01002, Length 492 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-225	ENST00000633295	RPL22L1	Q6P5R6	122 aa	Known RBP	4.65	□□□□□ -1.67
LINC01002-225	ENST00000633295	RNF182	Q8N6D2	247 aa		4.65	□□□□□ -1.67
LINC01002-225	ENST00000633295	SMCR5	Q8TEV8	140 aa		4.65	□□□□□ -1.67
LINC01002-225	ENST00000633295	SS18L2	Q9UHA2	77 aa		4.65	□□□□□ -1.67
LINC01002-225	ENST00000633295	FUT9	Q9Y231	359 aa		4.65	□□□□□ -1.67
LINC01002-225	ENST00000633295	SCN9A	Q15858	1988 aa		4.65	□□□□□ -1.67
LINC01002-225	ENST00000633295	ANKRD36C	Q5JPF3	1778 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	TRBV19	A0A075B6N1	114 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	IGHV3-15	A0A0B4J1V0	119 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	IGKV6D-41	A0A0C4DH26	115 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	SIGLEC16	A6NMB1	481 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295		H7C1C5	153 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	NDUFC2	O95298	119 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	C1QA	P02745	245 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	CRH	P06850	196 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	HIST1H2BO	P23527	126 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	CD24	P25063	80 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	HIST1H2BB	P33778	126 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	RWDD2B	P57060	319 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	HIST1H2BD	P58876	126 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	NCALD	P61601	193 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	RPS11	P62280	158 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	LCN6	P62502	163 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	HIST1H2BC	P62807	126 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	GNG5	P63218	68 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	SARNP	P82979	210 aa	Known RBP	4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	HIST2H2BE	Q16778	126 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	SH2D6	Q7Z4S9	175 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	ZNF439	Q8NDP4	499 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	C1orf64	Q8NEQ6	169 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	HIST1H2BH	Q93079	126 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	IGF2BP2-AS1	Q96M15	143 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	GPER1	Q99527	375 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	HIST1H2BN	Q99877	126 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	HIST1H2BM	Q99879	126 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	TMEM70	Q9BUB7	260 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	ACER3	Q9NUN7	267 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	CYSLTR1	Q9Y271	337 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	NDUFAF1	Q9Y375	327 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295		R4GN34	69 aa		4.64	□□□□□ -1.67
LINC01002-225	ENST00000633295	LRRC37A	A6NMS7	1700 aa		4.63	□□□□□ -1.67
LINC01002-225	ENST00000633295	FAM229B	Q4G0N7	80 aa		4.63	□□□□□ -1.67
LINC01002-225	ENST00000633295	SLC25A40	Q8TBP6	338 aa		4.63	□□□□□ -1.67
LINC01002-225	ENST00000633295	RNF122	Q9H9V4	155 aa		4.63	□□□□□ -1.67
LINC01002-225	ENST00000633295	IL36B	Q9NZH7	164 aa		4.63	□□□□□ -1.67
LINC01002-225	ENST00000633295	SSR3	Q9UNL2	185 aa		4.63	□□□□□ -1.67
LINC01002-225	ENST00000633295	AKAP11	Q9UKA4	1901 aa		4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	TRAV4	A0A0B4J268	109 aa		4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	CPSF4	O95639	269 aa	Known RBP	4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	SOD1	P00441	154 aa		4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	G6PC	P35575	357 aa		4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	CD200	P41217	278 aa		4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	ARPC4	P59998	168 aa		4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	AP1S1	P61966	158 aa		4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	FLI1	Q01543	452 aa	Predicted RBP	4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	ZNF675	Q8TD23	568 aa		4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	OR8B2	Q96RD0	313 aa		4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	C8orf4	Q9NR00	106 aa		4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	BATF3	Q9NR55	127 aa		4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	TXNL4B	Q9NX01	149 aa	Known RBP	4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	KDM3B	Q7LBC6	1761 aa		4.62	□□□□□ -1.67
LINC01002-225	ENST00000633295	TTC28	Q96AY4	2481 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295		H3BPC8	53 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	TP53I11	O14683	189 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	PSCA	O43653	123 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	CDS2	O95674	445 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	IGKV1-5	P01602	117 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	GZMB	P10144	247 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	ZNF22	P17026	224 aa	Predicted RBP	4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	XCL1	P47992	114 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	HIST1H4A	P62805	103 aa	Known RBP	4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	EIF4EBP2	Q13542	120 aa	Predicted RBP	4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	MIA	Q16674	131 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	DYDC1	Q8WWB3	177 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	H1FX	Q92522	213 aa	Known RBP	4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	CHST6	Q9GZX3	395 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	DSCAM	O60469	2012 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	DOCK3	Q8IZD9	2030 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	ATG2B	Q96BY7	2078 aa		4.61	□□□□□ -1.67
LINC01002-225	ENST00000633295	LAMB2	P55268	1798 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	PAPPA2	Q9BXP8	1791 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	VCAN	P13611	3396 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	IGKV1D-43	A0A0B4J1Z2	117 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	TMEM235	A6NFC5	223 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	LEPROT	O15243	131 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	SYNGR2	O43760	224 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	IFNA7	P01567	189 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	SMIM17	P0DL12	118 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	LINC00315	P59091	139 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	RPL18	Q07020	188 aa	Known RBP	4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	ZNF141	Q15928	474 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	TMEM78	Q5T7P6	136 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	AADACL3	Q5VUY0	350 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	OR10K1	Q8NGX5	313 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	DEDD2	Q8WXF8	326 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	MIEN1	Q9BRT3	115 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms