RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 MIOXQ9UGB7 285 aa6.07□□□□□ -1.44
PKP4-217ENST00000628904 IGKV1OR2-108A0A075B7D4 117 aa6.07□□□□□ -1.44
PKP4-217ENST00000628904 IGHV1-3A0A0C4DH29 117 aa6.07□□□□□ -1.44
PKP4-217ENST00000628904 SNURFLB1AK76 121 aa6.07□□□□□ -1.44
PKP4-217ENST00000628904 C19orf84I3L1E1 186 aa6.07□□□□□ -1.44
PKP4-217ENST00000628904 ZNF439Q8NDP4 499 aa6.07□□□□□ -1.44
PKP4-217ENST00000628904 TMEM170AQ8WVE7 144 aa6.07□□□□□ -1.44
PKP4-217ENST00000628904 CORO2AQ92828 525 aa6.07□□□□□ -1.44
PKP4-217ENST00000628904 FNDC4Q9H6D8 234 aaPredicted RBP6.07□□□□□ -1.44
PKP4-217ENST00000628904 ITPR1Q14643 2758 aa6.07□□□□□ -1.44
PKP4-217ENST00000628904 RBFOX2O43251 390 aaKnown RBP eCLIP6.06□□□□□ -1.441e-8■□□□□ 10.8
PKP4-217ENST00000628904 AGAP20933 346 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 BPIFB3P59826 476 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 PDPNQ86YL7 162 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 EXOC3-AS1Q8N2X6 119 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 ZNF596Q8TC21 504 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 ANAPC16Q96DE5 110 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 TIMM9Q9Y5J7 89 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 SERTM2A0A1B0GWG4 89 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 VDAC2P45880 294 aaPredicted RBP6.06□□□□□ -1.44
PKP4-217ENST00000628904 PRCDQ00LT1 54 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 HLA-DRB5Q30154 266 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 HIST2H2BDQ6DRA6 164 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 WFDC3Q8IUB2 231 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 OSR1Q8TAX0 266 aaPredicted RBP6.06□□□□□ -1.44
PKP4-217ENST00000628904 DEFB104AQ8WTQ1 72 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 WFDC12Q8WWY7 111 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 MANBALQ9NQG1 85 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 DPM3Q9P2X0 92 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 CLN5O75503 358 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 FRMD6-AS1P0C7T7 363 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 GZMBP10144 247 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 TFPI2P48307 235 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 UNQ5815/PRO19632Q6UWF5 114 aa6.06□□□□□ -1.44
PKP4-217ENST00000628904 DMRTC2Q8IXT2 367 aaPredicted RBP6.06□□□□□ -1.44
PKP4-217ENST00000628904 SSBP4Q9BWG4 385 aaPredicted RBP6.06□□□□□ -1.44
PKP4-217ENST00000628904 SOX21Q9Y651 276 aaPredicted RBP6.06□□□□□ -1.44
PKP4-217ENST00000628904 HIST1H2BKO60814 126 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 HIST1H2BJP06899 126 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 HIST1H2BOP23527 126 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 NPPCP23582 126 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 HIST1H2BBP33778 126 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 GATA4P43694 442 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 CNN1P51911 297 aaKnown RBP6.05□□□□□ -1.44
PKP4-217ENST00000628904 FOXA3P55318 350 aaPredicted RBP6.05□□□□□ -1.44
PKP4-217ENST00000628904 HIST1H2BDP58876 126 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 KRTDAPP60985 99 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 HIST1H2BCP62807 126 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 HIST2H2BEQ16778 126 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.05□□□□□ -1.44
PKP4-217ENST00000628904 CDPF1Q6NVV7 123 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 MMD2Q8IY49 270 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 OR5B3Q8NH48 314 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 HIST1H2BHQ93079 126 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 HIST1H2BNQ99877 126 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 HIST1H2BMQ99879 126 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 KCNIP2Q9NS61 270 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 CSMD2Q7Z408 3487 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 TRAV40A0A0B4J280 105 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 BUB1B-PAK6H3BSN5 160 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 FCN3O75636 299 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 C8orf88P0DMB2 117 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 RNASE2P10153 161 aaKnown RBP6.05□□□□□ -1.44
PKP4-217ENST00000628904 GPR183P32249 361 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 MC5RP33032 325 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 CD69Q07108 199 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 CYP2G1PQ6ZSU1 146 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 GOLT1AQ6ZVE7 132 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 VMO1Q7Z5L0 202 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 SCRT1Q9BWW7 348 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 C11orf1Q9H5F2 150 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 CBLN4Q9NTU7 201 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 AMMECR1Q9Y4X0 333 aaPredicted RBP6.05□□□□□ -1.44
PKP4-217ENST00000628904 ZNF785A8K8V0 405 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 HYPMO75409 117 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 SRD5A1P18405 259 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 MFAP2P55001 183 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 MEF2CQ06413 473 aaPredicted RBP6.05□□□□□ -1.44
PKP4-217ENST00000628904 DMRTA1Q5VZB9 504 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 C11orf44Q8N8P7 122 aa6.05□□□□□ -1.44
PKP4-217ENST00000628904 A0A1W2PPR1 153 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 G3V318 75 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 M0R3E3 92 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 TMEM155Q4W5P6 130 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 MBD3L1Q8WWY6 194 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 SFRP2Q96HF1 295 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 PACRGQ96M98 296 aaPredicted RBP6.04□□□□□ -1.44
PKP4-217ENST00000628904 OR51M1Q9H341 326 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 TUBA4BQ9H853 241 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 TMEM14BQ9NUH8 114 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 PMS2P5A8MQ11 134 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 CEACAM3P40198 252 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 RPL15P61313 204 aaKnown RBP6.04□□□□□ -1.44
PKP4-217ENST00000628904 RELQ04864 619 aaPredicted RBP6.04□□□□□ -1.44
PKP4-217ENST00000628904 PNRC1Q12796 327 aaPredicted RBP6.04□□□□□ -1.44
PKP4-217ENST00000628904 TMEM144Q7Z5S9 345 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 ZNF329Q86UD4 541 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 TCTEX1D1Q8N7M0 179 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 OR1L6Q8NGR2 347 aa6.04□□□□□ -1.44
PKP4-217ENST00000628904 ZNF331Q9NQX6 463 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms