RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 IGLC1P0CG04 106 aa19.44■□□□□ 0.7
CAPNS1-215ENST00000628018 RHOGP84095 191 aa19.44■□□□□ 0.7
CAPNS1-215ENST00000628018 NECAP1Q8NC96 275 aa19.44■□□□□ 0.7
CAPNS1-215ENST00000628018 GSX1Q9H4S2 264 aaPredicted RBP19.44■□□□□ 0.7
CAPNS1-215ENST00000628018 CDC42EP3Q9UKI2 254 aa19.44■□□□□ 0.7
CAPNS1-215ENST00000628018 DNAJC9-AS1A6NH13 148 aa19.43■□□□□ 0.7
CAPNS1-215ENST00000628018 MFAP4P55083 255 aa19.43■□□□□ 0.7
CAPNS1-215ENST00000628018 SELENOTP62341 195 aa19.43■□□□□ 0.7
CAPNS1-215ENST00000628018 DEFA5Q01523 94 aa19.43■□□□□ 0.7
CAPNS1-215ENST00000628018 CFHR3Q02985 330 aa19.43■□□□□ 0.7
CAPNS1-215ENST00000628018 SSX7Q7RTT5 188 aa19.43■□□□□ 0.7
CAPNS1-215ENST00000628018 MBD3L1Q8WWY6 194 aa19.43■□□□□ 0.7
CAPNS1-215ENST00000628018 ZNF702PQ9H963 129 aa19.43■□□□□ 0.7
CAPNS1-215ENST00000628018 C21orf62Q9NYP8 219 aa19.43■□□□□ 0.7
CAPNS1-215ENST00000628018 S4R3C0 116 aa19.43■□□□□ 0.7
CAPNS1-215ENST00000628018 F8W735 103 aaPredicted RBP19.42■□□□□ 0.7
CAPNS1-215ENST00000628018 H3BUA1 57 aa19.42■□□□□ 0.7
CAPNS1-215ENST00000628018 SRD5A1P18405 259 aa19.42■□□□□ 0.7
CAPNS1-215ENST00000628018 NPBWR1P48145 328 aa19.42■□□□□ 0.7
CAPNS1-215ENST00000628018 C15orf32Q32M92 178 aa19.42■□□□□ 0.7
CAPNS1-215ENST00000628018 TMEM95Q3KNT9 176 aa19.42■□□□□ 0.7
CAPNS1-215ENST00000628018 SPSB3Q6PJ21 355 aa19.42■□□□□ 0.7
CAPNS1-215ENST00000628018 MS4A10Q96PG2 267 aa19.42■□□□□ 0.7
CAPNS1-215ENST00000628018 ATP6V1G1O75348 118 aa19.41■□□□□ 0.7
CAPNS1-215ENST00000628018 FCGR2BP31994 310 aaPredicted RBP19.41■□□□□ 0.7
CAPNS1-215ENST00000628018 FAM122CQ6P4D5 195 aa19.41■□□□□ 0.7
CAPNS1-215ENST00000628018 ACTR3CQ9C0K3 210 aaPredicted RBP19.41■□□□□ 0.7
CAPNS1-215ENST00000628018 ESM1Q9NQ30 184 aa19.41■□□□□ 0.7
CAPNS1-215ENST00000628018 SEC14L6B5MCN3 397 aa19.41■□□□□ 0.7
CAPNS1-215ENST00000628018 IGLV1-40P01703 118 aa19.41■□□□□ 0.7
CAPNS1-215ENST00000628018 SFT2D1Q8WV19 159 aa19.41■□□□□ 0.7
CAPNS1-215ENST00000628018 MARC2Q969Z3 335 aa19.41■□□□□ 0.7
CAPNS1-215ENST00000628018 TXN2Q99757 166 aa19.41■□□□□ 0.7
CAPNS1-215ENST00000628018 TRAV30A0A087WSZ9 112 aa19.4■□□□□ 0.7
CAPNS1-215ENST00000628018 TRAV1-1A0A0B4J248 108 aa19.4■□□□□ 0.7
CAPNS1-215ENST00000628018 CTXND1A0A1B0GTU2 59 aa19.4■□□□□ 0.7
CAPNS1-215ENST00000628018 NUDT19A8MXV4 375 aa19.4■□□□□ 0.7
CAPNS1-215ENST00000628018 CLDN34H7C241 214 aa19.4■□□□□ 0.7
CAPNS1-215ENST00000628018 IGKV1-17P01599 117 aa19.4■□□□□ 0.7
CAPNS1-215ENST00000628018 IL34Q6ZMJ4 242 aa19.4■□□□□ 0.7
CAPNS1-215ENST00000628018 Q8N2B8 174 aa19.4■□□□□ 0.7
CAPNS1-215ENST00000628018 SLC25A22Q9H936 323 aa19.4■□□□□ 0.7
CAPNS1-215ENST00000628018 FAM223BA6NKX1 122 aa19.39■□□□□ 0.69
CAPNS1-215ENST00000628018 CDC34P49427 236 aaPredicted RBP19.39■□□□□ 0.69
CAPNS1-215ENST00000628018 TIGITQ495A1 244 aa19.39■□□□□ 0.69
CAPNS1-215ENST00000628018 FAM223AQ8IWN6 122 aa19.39■□□□□ 0.69
CAPNS1-215ENST00000628018 ZNF502Q8TBZ5 544 aa19.39■□□□□ 0.69
CAPNS1-215ENST00000628018 RAB24Q969Q5 203 aa19.39■□□□□ 0.69
CAPNS1-215ENST00000628018 PSMB11A5LHX3 300 aa19.38■□□□□ 0.69
CAPNS1-215ENST00000628018 GNG7O60262 68 aa19.38■□□□□ 0.69
CAPNS1-215ENST00000628018 IGHV3-23P01764 117 aa19.38■□□□□ 0.69
CAPNS1-215ENST00000628018 HBE1P02100 147 aa19.38■□□□□ 0.69
CAPNS1-215ENST00000628018 TRGV3P03979 118 aa19.38■□□□□ 0.69
CAPNS1-215ENST00000628018 Q56UQ5 140 aa19.38■□□□□ 0.69
CAPNS1-215ENST00000628018 LCN15Q6UWW0 184 aa19.38■□□□□ 0.69
CAPNS1-215ENST00000628018 MAP1LC3B2A6NCE7 125 aa19.37■□□□□ 0.69
CAPNS1-215ENST00000628018 EIF4E3Q8N5X7 224 aaKnown RBP19.37■□□□□ 0.69
CAPNS1-215ENST00000628018 CITED4Q96RK1 184 aa19.37■□□□□ 0.69
CAPNS1-215ENST00000628018 C19orf24Q9BVV8 132 aa19.37■□□□□ 0.69
CAPNS1-215ENST00000628018 MAP1LC3BQ9GZQ8 125 aa19.37■□□□□ 0.69
CAPNS1-215ENST00000628018 A0A1B0GV50 99 aa19.36■□□□□ 0.69
CAPNS1-215ENST00000628018 A0A1W2PPV4 95 aa19.36■□□□□ 0.69
CAPNS1-215ENST00000628018 RAB19A4D1S5 217 aa19.36■□□□□ 0.69
CAPNS1-215ENST00000628018 EIF3GO75821 320 aaKnown RBP eCLIP19.36■□□□□ 0.69
CAPNS1-215ENST00000628018 CCL20P78556 96 aa19.36■□□□□ 0.69
CAPNS1-215ENST00000628018 ATP5G2Q06055 141 aa19.36■□□□□ 0.69
CAPNS1-215ENST00000628018 COMMD1Q8N668 190 aa19.36■□□□□ 0.69
CAPNS1-215ENST00000628018 TMEM37Q8WXS4 190 aa19.36■□□□□ 0.69
CAPNS1-215ENST00000628018 EEF1AKMT3Q96AZ1 226 aa19.36■□□□□ 0.69
CAPNS1-215ENST00000628018 SEPSECSQ9HD40 501 aaKnown RBP19.36■□□□□ 0.69
CAPNS1-215ENST00000628018 IGHG4P01861 327 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 FABP1P07148 127 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 PSG1P11464 419 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 YPEL3P61236 119 aaPredicted RBP19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 RHOBP62745 196 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 Q71RC1 249 aaPredicted RBP19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 ZNF418Q8TF45 676 aaPredicted RBP19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 HIVEP2P31629 2446 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 TRBV7-1A0A0A6YYK4 115 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 FAM181BA6NEQ2 426 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 HMGB3O15347 200 aaKnown RBP19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 TPPP2P59282 170 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 PLP1P60201 277 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 OR1L4Q8NGR5 311 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 GATAD1Q8WUU5 269 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 CCDC140Q96MF4 163 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 KLK15Q9H2R5 256 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 DNAJC4Q9NNZ3 241 aa19.35■□□□□ 0.69
CAPNS1-215ENST00000628018 TMEM89A2RUT3 159 aa19.34■□□□□ 0.69
CAPNS1-215ENST00000628018 OR2T8A6NH00 312 aa19.34■□□□□ 0.69
CAPNS1-215ENST00000628018 TOMM40O96008 361 aa19.34■□□□□ 0.69
CAPNS1-215ENST00000628018 CTSGP08311 255 aa19.34■□□□□ 0.69
CAPNS1-215ENST00000628018 OR5G3P0C626 314 aa19.34■□□□□ 0.69
CAPNS1-215ENST00000628018 RD3LP0DJH9 198 aa19.34■□□□□ 0.69
CAPNS1-215ENST00000628018 PF4V1P10720 104 aa19.34■□□□□ 0.69
CAPNS1-215ENST00000628018 FGF8P55075 233 aaPredicted RBP19.34■□□□□ 0.69
CAPNS1-215ENST00000628018 FAM78BQ5VT40 261 aa19.34■□□□□ 0.69
CAPNS1-215ENST00000628018 PATE2Q6UY27 113 aa19.34■□□□□ 0.69
CAPNS1-215ENST00000628018 USMG5Q96IX5 58 aa19.34■□□□□ 0.69
CAPNS1-215ENST00000628018 ATP6V0BQ99437 205 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms