RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 LYRM2Q9NU23 88 aaPredicted RBP11.25□□□□□ -0.61
PNKP-221ENST00000627317 OR5AC2Q9NZP5 309 aa11.25□□□□□ -0.61
PNKP-221ENST00000627317 TRAV30A0A087WSZ9 112 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 ZNF320A2RRD8 509 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 SMCO3A2RU48 225 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 PRSS46E5RG02 174 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 CCNKO75909 580 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 MPC2O95563 127 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 OR10J1P30954 320 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 AKR1C1Q04828 323 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 GAMTQ14353 236 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 GPHB5Q86YW7 130 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 OR9G4Q8NGQ1 327 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 OR1S2Q8NGQ3 325 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 ASB13Q8WXK3 278 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 ELOVL1Q9BW60 279 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 GPR61Q9BZJ8 451 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 PEMTQ9UBM1 199 aa11.24□□□□□ -0.61
PNKP-221ENST00000627317 FAM24AA6NFZ4 105 aa11.23□□□□□ -0.61
PNKP-221ENST00000627317 H0YIZ8 118 aa11.23□□□□□ -0.61
PNKP-221ENST00000627317 NDUFA4O00483 81 aa11.23□□□□□ -0.61
PNKP-221ENST00000627317 CST7O76096 145 aa11.23□□□□□ -0.61
PNKP-221ENST00000627317 IGLC1P0CG04 106 aa11.23□□□□□ -0.61
PNKP-221ENST00000627317 RAP2BP61225 183 aa11.23□□□□□ -0.61
PNKP-221ENST00000627317 DLK1P80370 383 aa11.23□□□□□ -0.61
PNKP-221ENST00000627317 TIGITQ495A1 244 aa11.23□□□□□ -0.61
PNKP-221ENST00000627317 MBD2Q9UBB5 411 aa11.23□□□□□ -0.61
PNKP-221ENST00000627317 IGSF23A1L1A6 192 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 ZFP92A6NM28 416 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 PMS2P5A8MQ11 134 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 LGALS9O00182 355 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 SAP30O75446 220 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 YIF1AO95070 293 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 P2RY1P47900 373 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 SLC38A11Q08AI6 406 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 C9orf66Q5T8R8 295 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 HAPLN4Q86UW8 402 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 TMEM252Q8N6L7 170 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 THAP6Q8TBB0 222 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 TMEM190Q8WZ59 177 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 C20orf24Q9BUV8 137 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 SLC25A31Q9H0C2 315 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 UFC1Q9Y3C8 167 aa11.22□□□□□ -0.61
PNKP-221ENST00000627317 COL7A1Q02388 2944 aa11.21□□□□□ -0.61
PNKP-221ENST00000627317 A8MWP6 167 aa11.21□□□□□ -0.61
PNKP-221ENST00000627317 IGKV1-17P01599 117 aa11.21□□□□□ -0.61
PNKP-221ENST00000627317 SULT1A1P50225 295 aa11.21□□□□□ -0.61
PNKP-221ENST00000627317 HBG1P69891 147 aa11.21□□□□□ -0.61
PNKP-221ENST00000627317 HBG2P69892 147 aa11.21□□□□□ -0.61
PNKP-221ENST00000627317 FGL1Q08830 312 aa11.21□□□□□ -0.61
PNKP-221ENST00000627317 UNQ9165/PRO28630Q6UXU0 137 aa11.21□□□□□ -0.61
PNKP-221ENST00000627317 Q6ZNX1 250 aa11.21□□□□□ -0.61
PNKP-221ENST00000627317 LILRB2Q8N423 598 aa11.21□□□□□ -0.61
PNKP-221ENST00000627317 TMEM217Q8N7C4 229 aa11.21□□□□□ -0.61
PNKP-221ENST00000627317 IGHV3OR16-8A0A075B7F1 116 aa11.2□□□□□ -0.62
PNKP-221ENST00000627317 FNDC10F2Z333 226 aa11.2□□□□□ -0.62
PNKP-221ENST00000627317 K7EIL1 84 aa11.2□□□□□ -0.62
PNKP-221ENST00000627317 FABP1P07148 127 aa11.2□□□□□ -0.62
PNKP-221ENST00000627317 EWSR1Q01844 656 aaKnown RBP eCLIP11.2□□□□□ -0.62
PNKP-221ENST00000627317 ARL16Q0P5N6 197 aa11.2□□□□□ -0.62
PNKP-221ENST00000627317 THAP8Q8NA92 274 aa11.2□□□□□ -0.62
PNKP-221ENST00000627317 GINS3Q9BRX5 216 aa11.2□□□□□ -0.62
PNKP-221ENST00000627317 RNF126Q9BV68 326 aa11.2□□□□□ -0.62
PNKP-221ENST00000627317 GGACTQ9BVM4 153 aa11.2□□□□□ -0.62
PNKP-221ENST00000627317 PUS1Q9Y606 427 aaKnown RBP eCLIP11.2□□□□□ -0.62
PNKP-221ENST00000627317 TRAV14DV4A0A0A6YYC5 116 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 TMEM213A2RRL7 107 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 C2orf70A6NJV1 201 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 ZNF207O43670 478 aaKnown RBP11.19□□□□□ -0.62
PNKP-221ENST00000627317 S100A11P31949 105 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 INSL3P51460 131 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 ELLP55199 621 aaPredicted RBP11.19□□□□□ -0.62
PNKP-221ENST00000627317 YPEL3P61236 119 aaPredicted RBP11.19□□□□□ -0.62
PNKP-221ENST00000627317 BAXQ07812 192 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 TM4SF20Q53R12 229 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 TOMM20LQ6UXN7 152 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 TMEM144Q7Z5S9 345 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 OR2T35Q8NGX2 323 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 MRAPQ8TCY5 172 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 DYNLRB2Q8TF09 96 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 Q8WTZ3 238 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 TRGV9Q99603 122 aa11.19□□□□□ -0.62
PNKP-221ENST00000627317 DAZ1Q9NQZ3 744 aaKnown RBP11.19□□□□□ -0.62
PNKP-221ENST00000627317 hCG_2014768A0A024R1R8 64 aa11.18□□□□□ -0.62
PNKP-221ENST00000627317 IGKV1D-37A0A075B6S9 117 aa11.18□□□□□ -0.62
PNKP-221ENST00000627317 WI2-2373I1.2A0A1W2PRP0 233 aa11.18□□□□□ -0.62
PNKP-221ENST00000627317 TOMM40O96008 361 aa11.18□□□□□ -0.62
PNKP-221ENST00000627317 CSN3P07498 182 aa11.18□□□□□ -0.62
PNKP-221ENST00000627317 RD3LP0DJH9 198 aa11.18□□□□□ -0.62
PNKP-221ENST00000627317 LYL1P12980 280 aa11.18□□□□□ -0.62
PNKP-221ENST00000627317 FOLR2P14207 255 aa11.18□□□□□ -0.62
PNKP-221ENST00000627317 MARC2Q969Z3 335 aa11.18□□□□□ -0.62
PNKP-221ENST00000627317 TMEM147Q9BVK8 224 aa11.18□□□□□ -0.62
PNKP-221ENST00000627317 NPVFQ9HCQ7 196 aa11.18□□□□□ -0.62
PNKP-221ENST00000627317 UQCC1Q9NVA1 299 aa11.18□□□□□ -0.62
PNKP-221ENST00000627317 IGKV1OR2-108A0A075B7D4 117 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 K7EMT4 169 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 IL4P05112 153 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 RPL12P30050 165 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms