RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 FAM167A-AS1Q96KT0 104 aa15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 SLC25A2Q9BXI2 301 aa15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 ABCA1O95477 2261 aa15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 PGPEP1LA6NFU8 196 aa15.59■□□□□ 0.09
CHRNA4-209ENST00000627000 COX7A2P2O60397 106 aa15.59■□□□□ 0.09
CHRNA4-209ENST00000627000 C8orf88P0DMB2 117 aa15.59■□□□□ 0.09
CHRNA4-209ENST00000627000 TMEM116Q8NCL8 245 aa15.59■□□□□ 0.09
CHRNA4-209ENST00000627000 AJUBAQ96IF1 538 aa15.59■□□□□ 0.09
CHRNA4-209ENST00000627000 TXNDC17Q9BRA2 123 aa15.59■□□□□ 0.09
CHRNA4-209ENST00000627000 TMEM242Q9NWH2 141 aa15.59■□□□□ 0.09
CHRNA4-209ENST00000627000 VPS13CQ709C8 3753 aa15.59■□□□□ 0.09
CHRNA4-209ENST00000627000 CORTO00230 105 aa15.59■□□□□ 0.09
CHRNA4-209ENST00000627000 PQLC2Q6ZP29 291 aa15.59■□□□□ 0.09
CHRNA4-209ENST00000627000 ABCA2Q9BZC7 2435 aa15.59■□□□□ 0.09
CHRNA4-209ENST00000627000 TRBV20OR9-2A0A075B6H5 130 aa15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 NCBP2LA6PVI3 153 aaKnown RBP15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 OOSP1A8MZH6 123 aa15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 S100A2P29034 98 aa15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 UBE2E1P51965 193 aa15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 TAS2R45P59539 299 aa15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 C10orf113Q5VZT2 155 aa15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 Q8N6K4 173 aa15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 MRPL32Q9BYC8 188 aaKnown RBP15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 TMEM167BQ9NRX6 74 aa15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 RPS10P46783 165 aaKnown RBP15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 SELENOTP62341 195 aa15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 ZNF355PQ9NSJ1 428 aa15.58■□□□□ 0.08
CHRNA4-209ENST00000627000 IGHV4-61A0A0C4DH41 118 aa15.57■□□□□ 0.08
CHRNA4-209ENST00000627000 I3L2K1 104 aa15.57■□□□□ 0.08
CHRNA4-209ENST00000627000 FAM120AOSQ5T036 256 aa15.57■□□□□ 0.08
CHRNA4-209ENST00000627000 LINC01551Q86U37 167 aa15.57■□□□□ 0.08
CHRNA4-209ENST00000627000 OR5AU1Q8NGC0 362 aa15.57■□□□□ 0.08
CHRNA4-209ENST00000627000 C22orf15Q8WYQ4 148 aa15.57■□□□□ 0.08
CHRNA4-209ENST00000627000 FAM168AQ92567 244 aa15.57■□□□□ 0.08
CHRNA4-209ENST00000627000 TRGV9Q99603 122 aa15.57■□□□□ 0.08
CHRNA4-209ENST00000627000 CTDSP1Q9GZU7 261 aa15.57■□□□□ 0.08
CHRNA4-209ENST00000627000 HOXA5P20719 270 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 SAA4P35542 130 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 NDPQ00604 133 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 EBI3Q14213 229 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 KLF17Q5JT82 389 aaPredicted RBP15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 NECAP1Q8NC96 275 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 OR1L4Q8NGR5 311 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 PFDN5Q99471 154 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 SRSF8Q9BRL6 282 aaKnown RBP15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 GOSR1O95249 250 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 PYYP10082 97 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 TMEM11P17152 192 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 ORM2P19652 201 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 CX3CL1P78423 397 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 RNF2Q99496 336 aa15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 TBL2Q9Y4P3 447 aaKnown RBP15.56■□□□□ 0.08
CHRNA4-209ENST00000627000 BPIFB3P59826 476 aa15.55■□□□□ 0.08
CHRNA4-209ENST00000627000 OR1B1Q8NGR6 318 aa15.55■□□□□ 0.08
CHRNA4-209ENST00000627000 PIMREGQ9BSJ6 248 aa15.55■□□□□ 0.08
CHRNA4-209ENST00000627000 CDX1P47902 265 aaPredicted RBP15.55■□□□□ 0.08
CHRNA4-209ENST00000627000 ASPHD1Q5U4P2 390 aa15.55■□□□□ 0.08
CHRNA4-209ENST00000627000 LINC00305Q7Z4B0 112 aa15.55■□□□□ 0.08
CHRNA4-209ENST00000627000 C10orf105Q8TEF2 133 aa15.55■□□□□ 0.08
CHRNA4-209ENST00000627000 NRGNQ92686 78 aa15.55■□□□□ 0.08
CHRNA4-209ENST00000627000 ELOVL1Q9BW60 279 aa15.55■□□□□ 0.08
CHRNA4-209ENST00000627000 UTP20O75691 2785 aaKnown RBP15.54■□□□□ 0.08
CHRNA4-209ENST00000627000 GGTLC3B5MD39 225 aa15.54■□□□□ 0.08
CHRNA4-209ENST00000627000 SNRPCP09234 159 aaKnown RBP15.54■□□□□ 0.08
CHRNA4-209ENST00000627000 HNF1AP20823 631 aa15.54■□□□□ 0.08
CHRNA4-209ENST00000627000 ATP5J2P56134 94 aa15.54■□□□□ 0.08
CHRNA4-209ENST00000627000 UBE2L3P68036 154 aaKnown RBP15.54■□□□□ 0.08
CHRNA4-209ENST00000627000 PIP4P2Q8N4L2 257 aa15.54■□□□□ 0.08
CHRNA4-209ENST00000627000 C11orf52Q96A22 123 aa15.54■□□□□ 0.08
CHRNA4-209ENST00000627000 SPOCK3Q9BQ16 436 aa15.54■□□□□ 0.08
CHRNA4-209ENST00000627000 MYO18BQ8IUG5 2567 aa15.53■□□□□ 0.08
CHRNA4-209ENST00000627000 H7BYZ3 331 aa15.53■□□□□ 0.08
CHRNA4-209ENST00000627000 K7EIM0 57 aa15.53■□□□□ 0.08
CHRNA4-209ENST00000627000 IGLC1P0CG04 106 aa15.53■□□□□ 0.08
CHRNA4-209ENST00000627000 ZNF562Q6V9R5 426 aa15.53■□□□□ 0.08
CHRNA4-209ENST00000627000 ZNF843Q8N446 348 aa15.53■□□□□ 0.08
CHRNA4-209ENST00000627000 ARL2-SNX15V9GYD0 113 aa15.53■□□□□ 0.08
CHRNA4-209ENST00000627000 CRYBB3P26998 211 aa15.53■□□□□ 0.08
CHRNA4-209ENST00000627000 ARPC1AQ92747 370 aa15.53■□□□□ 0.08
CHRNA4-209ENST00000627000 GAR1Q9NY12 217 aaKnown RBP15.53■□□□□ 0.08
CHRNA4-209ENST00000627000 ZNF462Q96JM2 2506 aa15.53■□□□□ 0.08
CHRNA4-209ENST00000627000 SPG11Q96JI7 2443 aa15.52■□□□□ 0.08
CHRNA4-209ENST00000627000 CENPVL3A0A0U1RRI6 287 aa15.52■□□□□ 0.08
CHRNA4-209ENST00000627000 TGOLN2O43493 480 aa15.52■□□□□ 0.08
CHRNA4-209ENST00000627000 PFN1P07737 140 aaKnown RBP15.52■□□□□ 0.08
CHRNA4-209ENST00000627000 SUMO1P63165 101 aaKnown RBP15.52■□□□□ 0.08
CHRNA4-209ENST00000627000 CLEC12BQ2HXU8 276 aa15.52■□□□□ 0.08
CHRNA4-209ENST00000627000 DNLZQ5SXM8 178 aa15.52■□□□□ 0.08
CHRNA4-209ENST00000627000 FAM210BQ96KR6 192 aa15.52■□□□□ 0.08
CHRNA4-209ENST00000627000 PAXXQ9BUH6 204 aa15.52■□□□□ 0.08
CHRNA4-209ENST00000627000 POLR3KQ9Y2Y1 108 aaPredicted RBP15.52■□□□□ 0.08
CHRNA4-209ENST00000627000 IGHV3OR16-10A0A075B7F0 116 aa15.52■□□□□ 0.07
CHRNA4-209ENST00000627000 IGHV4-30-2A0A087WSY4 118 aa15.52■□□□□ 0.07
CHRNA4-209ENST00000627000 VWC2LB2RUY7 222 aa15.52■□□□□ 0.07
CHRNA4-209ENST00000627000 NPFFO15130 113 aa15.52■□□□□ 0.07
CHRNA4-209ENST00000627000 TIGITQ495A1 244 aa15.52■□□□□ 0.07
CHRNA4-209ENST00000627000 OCC1Q8TAD7 63 aa15.52■□□□□ 0.07
CHRNA4-209ENST00000627000 S4R3C0 116 aa15.52■□□□□ 0.07
CHRNA4-209ENST00000627000 ELOA3CA0A087WX78 387 aaPredicted RBP15.51■□□□□ 0.07
CHRNA4-209ENST00000627000 GALR1P47211 349 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms