RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	NHP2	Q9NX24	153 aa	Known RBP	11.55	□□□□□ -0.56
NRXN1-222	ENST00000625672	C15orf32	Q32M92	178 aa		11.55	□□□□□ -0.56
NRXN1-222	ENST00000625672	PIP4P2	Q8N4L2	257 aa		11.55	□□□□□ -0.56
NRXN1-222	ENST00000625672	TMEM14DP	A8MWL7	114 aa		11.55	□□□□□ -0.56
NRXN1-222	ENST00000625672		H3BUX3	64 aa		11.55	□□□□□ -0.56
NRXN1-222	ENST00000625672	ATXN8	Q156A1	80 aa		11.55	□□□□□ -0.56
NRXN1-222	ENST00000625672	ZNF562	Q6V9R5	426 aa		11.55	□□□□□ -0.56
NRXN1-222	ENST00000625672	DEFB130B	P0DP73	79 aa		11.55	□□□□□ -0.56
NRXN1-222	ENST00000625672	DEFB130A	P0DP74	79 aa		11.55	□□□□□ -0.56
NRXN1-222	ENST00000625672	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.55	□□□□□ -0.56
NRXN1-222	ENST00000625672	LINC00587	B1AMM8	73 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	YPEL1	O60688	119 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	GATA4	P43694	442 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	RPL15	P61313	204 aa	Known RBP	11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	ZNF672	Q499Z4	452 aa	Predicted RBP	11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	YPEL2	Q96QA6	119 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	WFDC6	Q9BQY6	131 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	LTBP4	Q8N2S1	1624 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	ARFGEF3	Q5TH69	2177 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	NPIPB13	A6NJU9	1138 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	SS18	Q15532	418 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	MORN2	Q502X0	79 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	TEX38	Q6PEX7	206 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	ORAOV1	Q8WV07	137 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	SPRR3	Q9UBC9	169 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	PSG8	Q9UQ74	426 aa		11.54	□□□□□ -0.56
NRXN1-222	ENST00000625672	IGHV1-18	A0A0C4DH31	117 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	LGALS1	P09382	135 aa	Known RBP	11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	PPP1R3E	Q9H7J1	279 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	CEP250	Q9BV73	2442 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	VWC2L	B2RUY7	222 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	ZNF876P	Q49A33	203 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	LHFPL4	Q7Z7J7	247 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	CD300E	Q496F6	205 aa	Predicted RBP	11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672		F2Z2F3	143 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	IGKV2D-40	P01614	121 aa	Predicted RBP	11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	CD5	P06127	495 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	PRCD	Q00LT1	54 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	DERL1	Q9BUN8	251 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	TAF1L	Q8IZX4	1826 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	IFI6	P09912	130 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672		Q71RC1	249 aa	Predicted RBP	11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	NIT1	Q86X76	327 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	LINC01356	Q8N9X3	169 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	CTHRC1	Q96CG8	243 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	NPIPB5	A8MRT5	1133 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	DLX4	Q92988	240 aa	Predicted RBP	11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	EPDR1	Q9UM22	224 aa		11.53	□□□□□ -0.56
NRXN1-222	ENST00000625672	SRSF4	Q08170	494 aa	Known RBP	11.52	□□□□□ -0.56
NRXN1-222	ENST00000625672	DOCK9	Q9BZ29	2069 aa		11.52	□□□□□ -0.56
NRXN1-222	ENST00000625672	RBM38	Q9H0Z9	239 aa	Known RBP	11.52	□□□□□ -0.56
NRXN1-222	ENST00000625672	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.52	□□□□□ -0.56
NRXN1-222	ENST00000625672	FCN3	O75636	299 aa		11.52	□□□□□ -0.56
NRXN1-222	ENST00000625672	IGKC	P01834	107 aa		11.52	□□□□□ -0.56
NRXN1-222	ENST00000625672	PYY	P10082	97 aa		11.52	□□□□□ -0.56
NRXN1-222	ENST00000625672	NDP	Q00604	133 aa		11.52	□□□□□ -0.56
NRXN1-222	ENST00000625672		E9PQ18	207 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	NMB	P08949	121 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	H2BFS	P57053	126 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	UBR3	Q6ZT12	1888 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	STRCP1	A6NGW2	1772 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	RAMP3	O60896	148 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	TRIOBP	Q9H2D6	2365 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	TMEM144	Q7Z5S9	345 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	TM2D1	Q9BX74	207 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	SPTBN2	O15020	2390 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	PQLC2L	A1A4F0	135 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	ITGB1BP1	O14713	200 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	SRRM4	A7MD48	611 aa	Known RBP	11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672		F5H768	121 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	TMEM126A	Q9H061	195 aa		11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.52	□□□□□ -0.57
NRXN1-222	ENST00000625672	IGHV2-26	A0A0B4J1V2	119 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	ZNF98	A6NK75	572 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	TEX43	Q6ZNM6	134 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	TMEM249	Q2WGJ8	235 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	C1orf159	Q96HA4	380 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	ABCA1	O95477	2261 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672		H3BUT2	72 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	PIN1P1	O15428	100 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	LAGE3	Q14657	143 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	NRN1	Q9NPD7	142 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	ZNF561-AS1	K7EIQ3	104 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	PLPPR1	Q8TBJ4	325 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	ZNF837	Q96EG3	531 aa	Predicted RBP	11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	ZNF329	Q86UD4	541 aa		11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	MBNL3	Q9NUK0	354 aa	Known RBP	11.51	□□□□□ -0.57
NRXN1-222	ENST00000625672	MLNR	O43193	412 aa		11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	RASL10A	Q92737	203 aa		11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	ERG28	Q9UKR5	140 aa		11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	TMEM155	Q4W5P6	130 aa		11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	ZNF625	Q96I27	306 aa	Predicted RBP	11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	CLDN16	Q9Y5I7	305 aa		11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	IGHV1-46	P01743	117 aa		11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	TRBV7-1	A0A0A6YYK4	115 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms