RNA–Protein interactions for RNA: ENST00000624193.1

ATRX-215, Transcript of ATRX, chromatin remodeler, human

TSL 4

Gene ATRX, Length 463 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-215	ENST00000624193	UPK1B	O75841	260 aa		11.23	□□□□□ -0.61
ATRX-215	ENST00000624193	VAMP1	P23763	118 aa		11.23	□□□□□ -0.61
ATRX-215	ENST00000624193	ASAH1	Q13510	395 aa		11.23	□□□□□ -0.61
ATRX-215	ENST00000624193	ZNF846	Q147U1	533 aa		11.23	□□□□□ -0.61
ATRX-215	ENST00000624193	BSX	Q3C1V8	233 aa		11.23	□□□□□ -0.61
ATRX-215	ENST00000624193	SCARB1	Q8WTV0	552 aa		11.23	□□□□□ -0.61
ATRX-215	ENST00000624193	WDR12	Q9GZL7	423 aa	Known RBP	11.23	□□□□□ -0.61
ATRX-215	ENST00000624193	C20orf85	Q9H1P6	137 aa		11.23	□□□□□ -0.61
ATRX-215	ENST00000624193	SMPX	Q9UHP9	88 aa		11.23	□□□□□ -0.61
ATRX-215	ENST00000624193	IGKV3-7	A0A075B6H7	116 aa		11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	IGHV3-49	A0A0A0MS15	119 aa		11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	C15orf62	A8K5M9	175 aa		11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	CENPX	A8MT69	81 aa		11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	PITX3	O75364	302 aa		11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	UBE2M	P61081	183 aa	Known RBP	11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	SRPX	P78539	464 aa		11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	DHRS2	Q13268	280 aa		11.22	□□□□□ -0.61
ATRX-215	ENST00000624193		Q56UQ5	140 aa		11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	LGI3	Q8N145	548 aa		11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	OR1P1	Q8NH06	330 aa		11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	RNASE11	Q8TAA1	199 aa	Known RBP	11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	TMEM170A	Q8WVE7	144 aa		11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	ATP6V0B	Q99437	205 aa		11.22	□□□□□ -0.61
ATRX-215	ENST00000624193	KIAA1109	Q2LD37	5005 aa		11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	IGHV7-4-1	A0A0J9YVY3	117 aa		11.21	□□□□□ -0.61
ATRX-215	ENST00000624193		I3L2K1	104 aa		11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	CHEK1	O14757	476 aa		11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	NXPH3	O95157	252 aa		11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	TCRB	P04435	133 aa		11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	OR4E1	P0C645	316 aa		11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	RNASE2	P10153	161 aa	Known RBP	11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	ANXA3	P12429	323 aa		11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	CMC4	P56277	68 aa	Predicted RBP	11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	TCTA	P57738	103 aa		11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	TMEM116	Q8NCL8	245 aa		11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	OR52E5	Q8NH55	327 aa		11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	RHPN1-AS1	Q9BWJ2	59 aa		11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.21	□□□□□ -0.61
ATRX-215	ENST00000624193	IGLL5	B9A064	214 aa		11.2	□□□□□ -0.62
ATRX-215	ENST00000624193	ADAP1	O75689	374 aa		11.2	□□□□□ -0.62
ATRX-215	ENST00000624193	CA1	P00915	261 aa	Predicted RBP	11.2	□□□□□ -0.62
ATRX-215	ENST00000624193	IFNA17	P01571	189 aa		11.2	□□□□□ -0.62
ATRX-215	ENST00000624193	SPCS3	P61009	180 aa		11.2	□□□□□ -0.62
ATRX-215	ENST00000624193	NUDT15	Q9NV35	164 aa		11.2	□□□□□ -0.62
ATRX-215	ENST00000624193	HSPB7	Q9UBY9	170 aa		11.2	□□□□□ -0.62
ATRX-215	ENST00000624193	APLN	Q9ULZ1	77 aa		11.2	□□□□□ -0.62
ATRX-215	ENST00000624193	DUXB	A0A1W2PPF3	345 aa		11.19	□□□□□ -0.62
ATRX-215	ENST00000624193	CTSG	P08311	255 aa		11.19	□□□□□ -0.62
ATRX-215	ENST00000624193	SULT1A3	P0DMM9	295 aa		11.19	□□□□□ -0.62
ATRX-215	ENST00000624193	SULT1A4	P0DMN0	295 aa		11.19	□□□□□ -0.62
ATRX-215	ENST00000624193	HOXA1	P49639	335 aa	Predicted RBP	11.19	□□□□□ -0.62
ATRX-215	ENST00000624193	SMCO1	Q147U7	214 aa		11.19	□□□□□ -0.62
ATRX-215	ENST00000624193	GBGT1	Q8N5D6	347 aa		11.19	□□□□□ -0.62
ATRX-215	ENST00000624193	TRAV6	A0A075B6T7	132 aa		11.18	□□□□□ -0.62
ATRX-215	ENST00000624193	IGHV3OR16-13	A0A075B7E8	117 aa		11.18	□□□□□ -0.62
ATRX-215	ENST00000624193	IGHV3-74	A0A0B4J1X5	117 aa		11.18	□□□□□ -0.62
ATRX-215	ENST00000624193		A0A1B0GU03	582 aa		11.18	□□□□□ -0.62
ATRX-215	ENST00000624193	YIF1A	O95070	293 aa		11.18	□□□□□ -0.62
ATRX-215	ENST00000624193	REL	Q04864	619 aa	Predicted RBP	11.18	□□□□□ -0.62
ATRX-215	ENST00000624193	GGNBP1	Q5YKI7	109 aa		11.18	□□□□□ -0.62
ATRX-215	ENST00000624193	OR10C1	Q96KK4	312 aa		11.18	□□□□□ -0.62
ATRX-215	ENST00000624193	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.18	□□□□□ -0.62
ATRX-215	ENST00000624193	MRPL36	Q9P0J6	103 aa	Known RBP	11.18	□□□□□ -0.62
ATRX-215	ENST00000624193	NUPL2	O15504	423 aa	Known RBP	11.17	□□□□□ -0.62
ATRX-215	ENST00000624193	MT-CO2	P00403	227 aa		11.17	□□□□□ -0.62
ATRX-215	ENST00000624193	IGHV3-48	P01763	117 aa		11.17	□□□□□ -0.62
ATRX-215	ENST00000624193	HOXB5	P09067	269 aa		11.17	□□□□□ -0.62
ATRX-215	ENST00000624193	C4orf46	Q504U0	113 aa		11.17	□□□□□ -0.62
ATRX-215	ENST00000624193	FAM90A2P	Q658T7	463 aa		11.17	□□□□□ -0.62
ATRX-215	ENST00000624193	MITD1	Q8WV92	249 aa		11.17	□□□□□ -0.62
ATRX-215	ENST00000624193	MISP3	Q96FF7	219 aa		11.17	□□□□□ -0.62
ATRX-215	ENST00000624193	SEC22C	Q9BRL7	303 aa		11.17	□□□□□ -0.62
ATRX-215	ENST00000624193	PDCD10	Q9BUL8	212 aa		11.17	□□□□□ -0.62
ATRX-215	ENST00000624193	RBKS	Q9H477	322 aa		11.17	□□□□□ -0.62
ATRX-215	ENST00000624193	TMED3	Q9Y3Q3	217 aa		11.17	□□□□□ -0.62
ATRX-215	ENST00000624193	DNAH6	Q9C0G6	4158 aa		11.16	□□□□□ -0.62
ATRX-215	ENST00000624193	TRAV14DV4	A0A0A6YYC5	116 aa		11.16	□□□□□ -0.62
ATRX-215	ENST00000624193	C11orf94	C9JXX5	98 aa		11.16	□□□□□ -0.62
ATRX-215	ENST00000624193	SLC25A6	P12236	298 aa		11.16	□□□□□ -0.62
ATRX-215	ENST00000624193	PAFAH1B2	P68402	229 aa		11.16	□□□□□ -0.62
ATRX-215	ENST00000624193	ERH	P84090	104 aa	Known RBP	11.16	□□□□□ -0.62
ATRX-215	ENST00000624193	LEMD1	Q68G75	181 aa		11.16	□□□□□ -0.62
ATRX-215	ENST00000624193	TCF24	Q7RTU0	167 aa		11.16	□□□□□ -0.62
ATRX-215	ENST00000624193	NRARP	Q7Z6K4	114 aa		11.16	□□□□□ -0.62
ATRX-215	ENST00000624193		Q8NAQ8	132 aa		11.16	□□□□□ -0.62
ATRX-215	ENST00000624193	VPS13D	Q5THJ4	4388 aa		11.15	□□□□□ -0.62
ATRX-215	ENST00000624193	FAM240B	A0A1B0GVZ2	78 aa		11.15	□□□□□ -0.62
ATRX-215	ENST00000624193	H2AFB2	P0C5Z0	115 aa		11.15	□□□□□ -0.62
ATRX-215	ENST00000624193	MLANA	Q16655	118 aa		11.15	□□□□□ -0.62
ATRX-215	ENST00000624193	LINC00336	Q6ZUF6	198 aa		11.15	□□□□□ -0.62
ATRX-215	ENST00000624193	HRH4	Q9H3N8	390 aa		11.15	□□□□□ -0.62
ATRX-215	ENST00000624193	CEBPZOS	A8MTT3	80 aa		11.14	□□□□□ -0.63
ATRX-215	ENST00000624193	SNCA	P37840	140 aa		11.14	□□□□□ -0.63
ATRX-215	ENST00000624193	MFAP4	P55083	255 aa		11.14	□□□□□ -0.63
ATRX-215	ENST00000624193	DEFB131A	P59861	70 aa		11.14	□□□□□ -0.63
ATRX-215	ENST00000624193	C2orf83	Q53S99	150 aa		11.14	□□□□□ -0.63
ATRX-215	ENST00000624193	MZT2B	Q6NZ67	158 aa		11.14	□□□□□ -0.63
ATRX-215	ENST00000624193	DUSP18	Q8NEJ0	188 aa		11.14	□□□□□ -0.63
ATRX-215	ENST00000624193	SLC24A4	Q8NFF2	622 aa		11.14	□□□□□ -0.63
ATRX-215	ENST00000624193	OR4D5	Q8NGN0	318 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms