RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 ZFP62Q8NB50 900 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-206ENST00000623610 RITA1Q96K30 269 aa6.75□□□□□ -1.33
CDKL5-206ENST00000623610 ANAPC10Q9UM13 185 aa6.75□□□□□ -1.33
CDKL5-206ENST00000623610 FLVCR1Q9Y5Y0 555 aa6.75□□□□□ -1.33
CDKL5-206ENST00000623610 KNTC1P50748 2209 aa6.75□□□□□ -1.33
CDKL5-206ENST00000623610 PLXNB3Q9ULL4 1909 aa6.75□□□□□ -1.33
CDKL5-206ENST00000623610 TRBV5-3A0A0A0MS03 114 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 TNFP01375 233 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 MT-ATP8P03928 68 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 HNRNPA3P51991 378 aaKnown RBP6.74□□□□□ -1.33
CDKL5-206ENST00000623610 TMEM183BQ1AE95 376 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 GFI1BQ5VTD9 330 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 DPH3Q96FX2 82 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 GPX7Q96SL4 187 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-206ENST00000623610 NMNAT3Q96T66 252 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 SEC61A2Q9H9S3 476 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 LINC00312Q9Y6C7 94 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 ASXL3Q9C0F0 2248 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 DMXL2Q8TDJ6 3036 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 ARHGEF17Q96PE2 2063 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-206ENST00000623610 GSTZ1O43708 216 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-206ENST00000623610 SS18L1O75177 396 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-206ENST00000623610 S100A3P33764 101 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 BTCP35070 178 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 OPRK1P41145 380 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 GABARAPL2P60520 117 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 SRSF9Q13242 221 aaKnown RBP eCLIP6.74□□□□□ -1.33
CDKL5-206ENST00000623610 RTL8BQ17RB0 113 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 ZNF260Q3ZCT1 412 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 Q6Q795 121 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 RTN4IP1Q8WWV3 396 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-206ENST00000623610 MBD6Q96DN6 1003 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 RTL8AQ9BWD3 113 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 AICDAQ9GZX7 198 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 UQCR10Q9UDW1 63 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 C19orf25Q9UFG5 118 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-206ENST00000623610 LRP4O75096 1905 aa6.74□□□□□ -1.33
CDKL5-206ENST00000623610 MEIS3P1A6NDR6 274 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 OR2T8A6NH00 312 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 NDUFS5O43920 106 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 PTHP01270 115 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 ADCYAP1P18509 176 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 SLC25A1P53007 311 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 NOXRED1Q6NXP6 359 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 CFAP47Q6ZTR5 3102 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 FAM19A3Q7Z5A8 133 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 ODF3L1Q8IXM7 274 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 TMEM183AQ8IXX5 376 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 PAXXQ9BUH6 204 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 MRPL20Q9BYC9 149 aaKnown RBP6.73□□□□□ -1.33
CDKL5-206ENST00000623610 TMEM191AQ9H0A3 160 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 RNF114Q9Y508 228 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 RP1P56715 2156 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 MUC21A0A0G2JKD1 596 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 CD300LBA8K4G0 201 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 FFAR1O14842 300 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 HIST1H2BKO60814 126 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 SIX6O95475 246 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 SOD1P00441 154 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 HIST1H2BJP06899 126 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 P0DMU3 169 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 FAM231AP0DMU4 169 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 FAM231CP0DMU5 169 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 HIST1H2BOP23527 126 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 HIST1H2BBP33778 126 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 POLR2IP36954 125 aaKnown RBP6.73□□□□□ -1.33
CDKL5-206ENST00000623610 SRP14P37108 136 aaKnown RBP6.73□□□□□ -1.33
CDKL5-206ENST00000623610 INSL3P51460 131 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 HIST1H2BDP58876 126 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 HIST1H2BCP62807 126 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 HIST2H2BEQ16778 126 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-206ENST00000623610 MRPL54Q6P161 138 aaKnown RBP6.73□□□□□ -1.33
CDKL5-206ENST00000623610 ZNF491Q8N8L2 437 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 BRK1Q8WUW1 75 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 HIST1H2BHQ93079 126 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 ZNF501Q96CX3 271 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-206ENST00000623610 HIST1H2BNQ99877 126 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 HIST1H2BMQ99879 126 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 FGF22Q9HCT0 170 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 LAMTOR3Q9UHA4 124 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 ACACBO00763 2458 aa6.73□□□□□ -1.33
CDKL5-206ENST00000623610 GNGT2O14610 69 aa6.72□□□□□ -1.33
CDKL5-206ENST00000623610 DPTQ07507 201 aa6.72□□□□□ -1.33
CDKL5-206ENST00000623610 XAF1Q6GPH4 301 aa6.72□□□□□ -1.33
CDKL5-206ENST00000623610 CLEC19AQ6UXS0 136 aa6.72□□□□□ -1.33
CDKL5-206ENST00000623610 RPS19BP1Q86WX3 136 aaKnown RBP6.72□□□□□ -1.33
CDKL5-206ENST00000623610 TMEM75Q8N9X5 138 aa6.72□□□□□ -1.33
CDKL5-206ENST00000623610 YPEL4Q96NS1 127 aa6.72□□□□□ -1.33
CDKL5-206ENST00000623610 TPRKBQ9Y3C4 175 aa6.72□□□□□ -1.33
CDKL5-206ENST00000623610 ZZEF1O43149 2961 aa6.72□□□□□ -1.33
CDKL5-206ENST00000623610 TRBV19A0A075B6N1 114 aa6.71□□□□□ -1.33
CDKL5-206ENST00000623610 IGLC7A0M8Q6 106 aa6.71□□□□□ -1.33
CDKL5-206ENST00000623610 FAM220BPB1ANY3 271 aa6.71□□□□□ -1.33
CDKL5-206ENST00000623610 DEDDO75618 318 aa6.71□□□□□ -1.33
CDKL5-206ENST00000623610 DEFB133Q30KQ1 61 aa6.71□□□□□ -1.33
CDKL5-206ENST00000623610 CLECL1Q8IZS7 167 aa6.71□□□□□ -1.33
CDKL5-206ENST00000623610 NEXN-AS1Q8NBZ9 246 aa6.71□□□□□ -1.33
CDKL5-206ENST00000623610 C18orf15Q96N68 181 aa6.71□□□□□ -1.33
CDKL5-206ENST00000623610 C11orf68Q9H3H3 251 aaKnown RBP6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms