RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 C10orf113Q5VZT2 155 aa11.43□□□□□ -0.58
LDB3-209ENST00000623056 PATE2Q6UY27 113 aa11.43□□□□□ -0.58
LDB3-209ENST00000623056 FXYD5Q96DB9 178 aa11.43□□□□□ -0.58
LDB3-209ENST00000623056 MCRIP2Q9BUT9 160 aaKnown RBP11.43□□□□□ -0.58
LDB3-209ENST00000623056 CSTL1Q9H114 145 aa11.43□□□□□ -0.58
LDB3-209ENST00000623056 RPP21Q9H633 154 aaKnown RBP11.43□□□□□ -0.58
LDB3-209ENST00000623056 RNFT1Q5M7Z0 435 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 GCSAMQ8N6F7 178 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 MDS2Q8NDY4 140 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 GTSF1Q8WW33 167 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 ZPBPQ9BS86 351 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 KBTBD11-OT1A0A1B0GTJ5 212 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 ACP1P24666 158 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 HOXC12P31275 282 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 MYCNOSP40205 109 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 HIST1H1AQ02539 215 aaPredicted RBP11.42□□□□□ -0.58
LDB3-209ENST00000623056 FAM71F2Q6NXP2 309 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 PET117Q6UWS5 81 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 LINC00322Q6ZN03 302 aaPredicted RBP11.42□□□□□ -0.58
LDB3-209ENST00000623056 Q6ZT83 130 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 CACNG8Q8WXS5 425 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 PGLYRP4Q96LB8 373 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 MAP1LC3CQ9BXW4 147 aa11.42□□□□□ -0.58
LDB3-209ENST00000623056 LIPFP07098 398 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 MZT1Q08AG7 82 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 MS4A6AQ9H2W1 248 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 EPDR1Q9UM22 224 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 LOC102724200A0A096LPH7 203 aaPredicted RBP11.41□□□□□ -0.58
LDB3-209ENST00000623056 H0Y8G0 127 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 K7ERU9 68 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 FSTL3O95633 263 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 SAA1P0DJI8 122 aaPredicted RBP11.41□□□□□ -0.58
LDB3-209ENST00000623056 CT45A6P0DMU7 189 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 CT45A5P0DMU8 189 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 CT45A7P0DMV0 189 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 CD46P15529 392 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 S100A7P31151 101 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 ZNF137PP52743 207 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 SPRNQ5BIV9 151 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 MBNL2Q5VZF2 373 aaKnown RBP11.41□□□□□ -0.58
LDB3-209ENST00000623056 OR1L4Q8NGR5 311 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 SPRY4Q9C004 299 aa11.41□□□□□ -0.58
LDB3-209ENST00000623056 PEF1Q9UBV8 284 aaKnown RBP11.41□□□□□ -0.58
LDB3-209ENST00000623056 PCNX2A6NKB5 2137 aa11.4□□□□□ -0.58
LDB3-209ENST00000623056 A8MWL6 223 aa11.4□□□□□ -0.58
LDB3-209ENST00000623056 PLAUP00749 431 aa11.4□□□□□ -0.58
LDB3-209ENST00000623056 SLC25A5P05141 298 aaKnown RBP11.4□□□□□ -0.58
LDB3-209ENST00000623056 OR5AL1P0C617 328 aa11.4□□□□□ -0.58
LDB3-209ENST00000623056 GPR183P32249 361 aa11.4□□□□□ -0.58
LDB3-209ENST00000623056 ZNF138P52744 262 aa11.4□□□□□ -0.58
LDB3-209ENST00000623056 H1FXQ92522 213 aaKnown RBP11.4□□□□□ -0.58
LDB3-209ENST00000623056 PRSS22Q9GZN4 317 aa11.4□□□□□ -0.58
LDB3-209ENST00000623056 SOX21Q9Y651 276 aaPredicted RBP11.4□□□□□ -0.58
LDB3-209ENST00000623056 C9orf172C9J069 976 aa11.4□□□□□ -0.59
LDB3-209ENST00000623056 MOSP00540 346 aa11.4□□□□□ -0.59
LDB3-209ENST00000623056 BPIFB3P59826 476 aa11.4□□□□□ -0.59
LDB3-209ENST00000623056 FOXE3Q13461 319 aa11.4□□□□□ -0.59
LDB3-209ENST00000623056 PDPNQ86YL7 162 aa11.4□□□□□ -0.59
LDB3-209ENST00000623056 SMIM12Q96EX1 92 aa11.4□□□□□ -0.59
LDB3-209ENST00000623056 GPR82Q96P67 336 aa11.4□□□□□ -0.59
LDB3-209ENST00000623056 PMCHL2Q9BQD1 86 aa11.4□□□□□ -0.59
LDB3-209ENST00000623056 MLST8Q9BVC4 326 aa11.4□□□□□ -0.59
LDB3-209ENST00000623056 RPH3ALQ9UNE2 315 aa11.4□□□□□ -0.59
LDB3-209ENST00000623056 KLF12Q9Y4X4 402 aa11.4□□□□□ -0.59
LDB3-209ENST00000623056 COL27A1Q8IZC6 1860 aaPredicted RBP11.39□□□□□ -0.59
LDB3-209ENST00000623056 P01737 135 aa11.39□□□□□ -0.59
LDB3-209ENST00000623056 IGLC1P0CG04 106 aa11.39□□□□□ -0.59
LDB3-209ENST00000623056 CT83Q5H943 113 aa11.39□□□□□ -0.59
LDB3-209ENST00000623056 DUX4L9Q6RFH8 374 aaPredicted RBP11.39□□□□□ -0.59
LDB3-209ENST00000623056 CNEP1R1Q8N9A8 125 aa11.39□□□□□ -0.59
LDB3-209ENST00000623056 ZC2HC1AQ96GY0 325 aa11.39□□□□□ -0.59
LDB3-209ENST00000623056 ZNF430Q9H8G1 570 aaPredicted RBP11.39□□□□□ -0.59
LDB3-209ENST00000623056 RAB9BQ9NP90 201 aa11.39□□□□□ -0.59
LDB3-209ENST00000623056 DSCAML1Q8TD84 2053 aa11.39□□□□□ -0.59
LDB3-209ENST00000623056 PRR33A8MZF0 331 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 CDX4O14627 284 aaPredicted RBP11.38□□□□□ -0.59
LDB3-209ENST00000623056 IGHV3-48P01763 117 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 CFHR2P36980 270 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 TMEM177Q53S58 311 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 C2orf91Q6ZV80 131 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 MOGAT3Q86VF5 341 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 BLNKQ8WV28 456 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 NPIPB3Q92617 1050 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 NDUFA4L2Q9NRX3 87 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 ZNRD1Q9P1U0 126 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 IGKV1D-37A0A075B6S9 117 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 TCRBV4S1A1TA0A5B7 111 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 C7orf71A4D174 169 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 C19orf71A6NCJ1 209 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 ZNF883P0CG24 379 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 CD59P13987 128 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 PLA2G2CQ5R387 149 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 FAM201AQ5SY85 155 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 RBPMS2Q6ZRY4 209 aaKnown RBP11.38□□□□□ -0.59
LDB3-209ENST00000623056 LINC00305Q7Z4B0 112 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 SARAFQ96BY9 339 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 NDFIP1Q9BT67 221 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 MEGF9Q9H1U4 602 aa11.38□□□□□ -0.59
LDB3-209ENST00000623056 FNDC4Q9H6D8 234 aaPredicted RBP11.38□□□□□ -0.59
LDB3-209ENST00000623056 HSPB8Q9UJY1 196 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms