RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 IGHV4-30-2A0A087WSY4 118 aa12.96□□□□□ -0.34
LDB3-208ENST00000623007 C9JCJ5 164 aa12.96□□□□□ -0.34
LDB3-208ENST00000623007 J3QLI3 93 aa12.96□□□□□ -0.34
LDB3-208ENST00000623007 IGLC1P0CG04 106 aa12.96□□□□□ -0.34
LDB3-208ENST00000623007 S100PP25815 95 aa12.96□□□□□ -0.34
LDB3-208ENST00000623007 ATP5G3P48201 142 aa12.96□□□□□ -0.34
LDB3-208ENST00000623007 MFAP4P55083 255 aa12.96□□□□□ -0.34
LDB3-208ENST00000623007 ADIRFQ15847 76 aa12.96□□□□□ -0.34
LDB3-208ENST00000623007 HIST1H2BAQ96A08 127 aa12.96□□□□□ -0.34
LDB3-208ENST00000623007 IGLV11-55A0A075B6I3 123 aa12.95□□□□□ -0.34
LDB3-208ENST00000623007 C1orf196B1AJZ1 125 aa12.95□□□□□ -0.34
LDB3-208ENST00000623007 GATA2P23769 480 aaPredicted RBP12.95□□□□□ -0.34
LDB3-208ENST00000623007 FCGR2BP31994 310 aaPredicted RBP12.95□□□□□ -0.34
LDB3-208ENST00000623007 YPEL3P61236 119 aaPredicted RBP12.95□□□□□ -0.34
LDB3-208ENST00000623007 RPL23P62829 140 aaKnown RBP12.95□□□□□ -0.34
LDB3-208ENST00000623007 UBE2L3P68036 154 aaKnown RBP12.95□□□□□ -0.34
LDB3-208ENST00000623007 ZNF90Q03938 601 aa12.95□□□□□ -0.34
LDB3-208ENST00000623007 CLEC12BQ2HXU8 276 aa12.95□□□□□ -0.34
LDB3-208ENST00000623007 SPATA31B1PQ5VZV4 182 aa12.95□□□□□ -0.34
LDB3-208ENST00000623007 LINC00305Q7Z4B0 112 aa12.95□□□□□ -0.34
LDB3-208ENST00000623007 OR5AU1Q8NGC0 362 aa12.95□□□□□ -0.34
LDB3-208ENST00000623007 SGMS2Q8NHU3 365 aa12.95□□□□□ -0.34
LDB3-208ENST00000623007 AJUBAQ96IF1 538 aa12.95□□□□□ -0.34
LDB3-208ENST00000623007 RBM14Q96PK6 669 aaKnown RBP12.95□□□□□ -0.34
LDB3-208ENST00000623007 PAXXQ9BUH6 204 aa12.95□□□□□ -0.34
LDB3-208ENST00000623007 OR51M1Q9H341 326 aa12.95□□□□□ -0.34
LDB3-208ENST00000623007 ZNF355PQ9NSJ1 428 aa12.95□□□□□ -0.34
LDB3-208ENST00000623007 K7EIM0 57 aa12.94□□□□□ -0.34
LDB3-208ENST00000623007 M0QZK8 103 aa12.94□□□□□ -0.34
LDB3-208ENST00000623007 EIF3GO75821 320 aaKnown RBP eCLIP12.94□□□□□ -0.34
LDB3-208ENST00000623007 NDUFB4O95168 129 aa12.94□□□□□ -0.34
LDB3-208ENST00000623007 RAB5AP20339 215 aa12.94□□□□□ -0.34
LDB3-208ENST00000623007 AKR1C3P42330 323 aa12.94□□□□□ -0.34
LDB3-208ENST00000623007 C1QL4Q86Z23 238 aa12.94□□□□□ -0.34
LDB3-208ENST00000623007 OR5B12Q96R08 314 aa12.94□□□□□ -0.34
LDB3-208ENST00000623007 SLC25A2Q9BXI2 301 aa12.94□□□□□ -0.34
LDB3-208ENST00000623007 HIGD1AQ9Y241 93 aa12.94□□□□□ -0.34
LDB3-208ENST00000623007 MOB4Q9Y3A3 225 aa12.94□□□□□ -0.34
LDB3-208ENST00000623007 IGHV7-81A0A0B4J1V7 117 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 LOC105371267A0A1B0GV96 52 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 RD3LP0DJH9 198 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 C16orf82Q7Z2V1 217 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 FAM110DQ8TAY7 271 aaPredicted RBP12.93□□□□□ -0.34
LDB3-208ENST00000623007 VN1R17PQ8TDU5 208 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 FAM167A-AS1Q96KT0 104 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 IMMP2LQ96T52 175 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 ATP6V0BQ99437 205 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 PITPNC1Q9UKF7 332 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 YTHDF2Q9Y5A9 579 aaKnown RBP12.93□□□□□ -0.34
LDB3-208ENST00000623007 TOMM40O96008 361 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 CRYBA1P05813 215 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 CD24P25063 80 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 FAM24BQ8N5W8 94 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 LINC01356Q8N9X3 169 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 OR1B1Q8NGR6 318 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 MRPL36Q9P0J6 103 aaKnown RBP12.93□□□□□ -0.34
LDB3-208ENST00000623007 DMRT1Q9Y5R6 373 aa12.93□□□□□ -0.34
LDB3-208ENST00000623007 ARHGAP32A7KAX9 2087 aa12.92□□□□□ -0.34
LDB3-208ENST00000623007 HRNRQ86YZ3 2850 aaPredicted RBP12.92□□□□□ -0.34
LDB3-208ENST00000623007 FASNP49327 2511 aaKnown RBP12.92□□□□□ -0.34
LDB3-208ENST00000623007 H7BYZ3 331 aa12.92□□□□□ -0.34
LDB3-208ENST00000623007 GNG7O60262 68 aa12.92□□□□□ -0.34
LDB3-208ENST00000623007 APELAP0DMC3 54 aa12.92□□□□□ -0.34
LDB3-208ENST00000623007 ORM2P19652 201 aa12.92□□□□□ -0.34
LDB3-208ENST00000623007 KCNIP4Q6PIL6 250 aa12.92□□□□□ -0.34
LDB3-208ENST00000623007 LINC01551Q86U37 167 aa12.92□□□□□ -0.34
LDB3-208ENST00000623007 ISOC2Q96AB3 205 aa12.92□□□□□ -0.34
LDB3-208ENST00000623007 YPEL4Q96NS1 127 aa12.92□□□□□ -0.34
LDB3-208ENST00000623007 C7orf69Q9H7B7 122 aa12.92□□□□□ -0.34
LDB3-208ENST00000623007 TMEM14CQ9P0S9 112 aa12.92□□□□□ -0.34
LDB3-208ENST00000623007 TRAV40A0A0B4J280 105 aa12.91□□□□□ -0.34
LDB3-208ENST00000623007 S100A9P06702 114 aaKnown RBP12.91□□□□□ -0.34
LDB3-208ENST00000623007 SRP14P37108 136 aaKnown RBP12.91□□□□□ -0.34
LDB3-208ENST00000623007 ELOBQ15370 118 aa12.91□□□□□ -0.34
LDB3-208ENST00000623007 PATE2Q6UY27 113 aa12.91□□□□□ -0.34
LDB3-208ENST00000623007 Q8WTZ3 238 aa12.91□□□□□ -0.34
LDB3-208ENST00000623007 ZNF503Q96F45 646 aa12.91□□□□□ -0.34
LDB3-208ENST00000623007 C21orf62Q9NYP8 219 aa12.91□□□□□ -0.34
LDB3-208ENST00000623007 TRBV24-1A0A075B6N3 115 aa12.9□□□□□ -0.34
LDB3-208ENST00000623007 HELTA6NFD8 242 aa12.9□□□□□ -0.34
LDB3-208ENST00000623007 PSG1P11464 419 aa12.9□□□□□ -0.34
LDB3-208ENST00000623007 NPPCP23582 126 aa12.9□□□□□ -0.34
LDB3-208ENST00000623007 TAS2R60P59551 318 aa12.9□□□□□ -0.34
LDB3-208ENST00000623007 SRSF1Q07955 248 aaKnown RBP eCLIP12.9□□□□□ -0.34
LDB3-208ENST00000623007 LOXL1Q08397 574 aaPredicted RBP12.9□□□□□ -0.34
LDB3-208ENST00000623007 ASPHD1Q5U4P2 390 aa12.9□□□□□ -0.34
LDB3-208ENST00000623007 FANCD2OSQ96PS1 177 aa12.9□□□□□ -0.34
LDB3-208ENST00000623007 MDFIC2A0A1B0GVS7 189 aa12.89□□□□□ -0.35
LDB3-208ENST00000623007 SCO2A0A1W2PP80 73 aa12.89□□□□□ -0.35
LDB3-208ENST00000623007 IGHV3-48P01763 117 aa12.89□□□□□ -0.35
LDB3-208ENST00000623007 CRIP2P52943 208 aaPredicted RBP12.89□□□□□ -0.35
LDB3-208ENST00000623007 C5orf56Q8N8D9 126 aa12.89□□□□□ -0.35
LDB3-208ENST00000623007 SMIM12Q96EX1 92 aa12.89□□□□□ -0.35
LDB3-208ENST00000623007 FAM103A1Q9BTL3 118 aaKnown RBP12.89□□□□□ -0.35
LDB3-208ENST00000623007 BIN3Q9NQY0 253 aa12.89□□□□□ -0.35
LDB3-208ENST00000623007 IGKV1-17P01599 117 aa12.89□□□□□ -0.35
LDB3-208ENST00000623007 TMUB1Q9BVT8 246 aa12.89□□□□□ -0.35
LDB3-208ENST00000623007 HIF1ANQ9NWT6 349 aa12.89□□□□□ -0.35
LDB3-208ENST00000623007 MRPL27Q9P0M9 148 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms