RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 M0QZK8 103 aa10.53□□□□□ -0.72
MSH6-215ENST00000622629 GGCTO75223 188 aaKnown RBP10.53□□□□□ -0.72
MSH6-215ENST00000622629 TBR1Q16650 682 aa10.53□□□□□ -0.72
MSH6-215ENST00000622629 TMEM200BQ69YZ2 307 aa10.53□□□□□ -0.72
MSH6-215ENST00000622629 OR8A1Q8NGG7 326 aa10.53□□□□□ -0.72
MSH6-215ENST00000622629 GAFA1Q96PS6 74 aa10.53□□□□□ -0.72
MSH6-215ENST00000622629 TRBV9A0A0B4J1U6 114 aa10.53□□□□□ -0.72
MSH6-215ENST00000622629 CCDC144NLQ6NUI1 221 aa10.53□□□□□ -0.72
MSH6-215ENST00000622629 OR4B1Q8NGF8 309 aa10.53□□□□□ -0.72
MSH6-215ENST00000622629 RNASEH2CQ8TDP1 164 aaKnown RBP10.53□□□□□ -0.72
MSH6-215ENST00000622629 SSBP4Q9BWG4 385 aaPredicted RBP10.53□□□□□ -0.72
MSH6-215ENST00000622629 MAP1LC3CQ9BXW4 147 aa10.53□□□□□ -0.72
MSH6-215ENST00000622629 A0A1B0GUS0 222 aa10.52□□□□□ -0.72
MSH6-215ENST00000622629 F2RL2O00254 374 aa10.52□□□□□ -0.72
MSH6-215ENST00000622629 OR2J3O76001 311 aa10.52□□□□□ -0.72
MSH6-215ENST00000622629 C11orf53Q8IXP5 236 aa10.52□□□□□ -0.72
MSH6-215ENST00000622629 PARD6GQ9BYG4 376 aaPredicted RBP10.52□□□□□ -0.72
MSH6-215ENST00000622629 NCOR1P1Q9H4R4 102 aa10.52□□□□□ -0.72
MSH6-215ENST00000622629 NUP210LQ5VU65 1888 aa10.52□□□□□ -0.72
MSH6-215ENST00000622629 ZNF788Q6ZQV5 615 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 IGHV3OR16-13A0A075B7E8 117 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 IGHV3-74A0A0B4J1X5 117 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 A0A1W2PRE2 83 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 HIGD1CA8MV81 97 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 PTTG1IPP53801 180 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 Q6ZS92 163 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 ZNF257Q9Y2Q1 563 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 DPRXA6NFQ7 191 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 HINT1P49773 126 aaPredicted RBP10.52□□□□□ -0.73
MSH6-215ENST00000622629 TMPRSS3P57727 454 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 KIR3DL3Q8N743 410 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 TMEM133Q9H2Q1 129 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 UFC1Q9Y3C8 167 aa10.52□□□□□ -0.73
MSH6-215ENST00000622629 C15orf65H3BRN8 121 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 LEPROTL1O95214 131 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 IGHV3-23P01764 117 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 CTAG1AP78358 180 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 GOLT1BQ9Y3E0 138 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 BMPR1BO00238 502 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 MMP23AO75900 390 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 FOXL1Q12952 345 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 TCF24Q7RTU0 167 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 GSX1Q9H4S2 264 aaPredicted RBP10.51□□□□□ -0.73
MSH6-215ENST00000622629 A0A0G2JNJ9 132 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 CGB1A6NKQ9 187 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 PPP1R27Q86WC6 154 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 Q9UFV3 132 aa10.51□□□□□ -0.73
MSH6-215ENST00000622629 TRANK1O15050 2925 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 LOC105371242A0A075B767 164 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 TCRBV4S1A1TA0A5B7 111 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 TAS2R60P59551 318 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 ADIPOQQ15848 244 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 LYPD2Q6UXB3 125 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 SPACA3Q8IXA5 215 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 LINC00479Q96M42 142 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 NDUFAF3Q9BU61 184 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 SPRY4Q9C004 299 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 DPM3Q9P2X0 92 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 MUC21A0A0G2JKD1 596 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 MUC21A0A140T8X8 626 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 MFAP4P55083 255 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 C2orf83Q53S99 150 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 MUC21Q5SSG8 566 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 COL5A1-AS1Q5SY13 56 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 OR4C5Q8NGB2 326 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 OSTCQ9NRP0 149 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 LRP4O75096 1905 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 ZNF114Q8NC26 417 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 OR5R1Q8NH85 324 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 NEUROG1Q92886 237 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 C14orf144Q96I85 54 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 NRN1Q9NPD7 142 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 PTPRQQ9UMZ3 2332 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 CEP192Q8TEP8 1941 aa10.5□□□□□ -0.73
MSH6-215ENST00000622629 TMEM178BH3BS89 294 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 PRSS1P07477 247 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 PLA2G5P39877 138 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 VDAC2P45880 294 aaPredicted RBP10.49□□□□□ -0.73
MSH6-215ENST00000622629 HBBP68871 147 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 SLC25A48Q6ZT89 311 aaKnown RBP10.49□□□□□ -0.73
MSH6-215ENST00000622629 GPR82Q96P67 336 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 PLXNB1O43157 2135 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 COMPP49747 757 aaPredicted RBP10.49□□□□□ -0.73
MSH6-215ENST00000622629 UCNP55089 124 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 DLX1P56177 255 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 UNQ5815/PRO19632Q6UWF5 114 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 Q9H3A6 140 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 UQCR10Q9UDW1 63 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 TMEM189A5PLL7 270 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 GOSR1O95249 250 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 IGLV1-44P01699 117 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 GRAMD2BQ96HH9 432 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 WNT2P09544 360 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 AREGP15514 252 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 LBHQ53QV2 105 aaPredicted RBP10.49□□□□□ -0.73
MSH6-215ENST00000622629 TRIOO75962 3097 aa10.49□□□□□ -0.73
MSH6-215ENST00000622629 H0YJW9 148 aa10.48□□□□□ -0.73
MSH6-215ENST00000622629 GZMBP10144 247 aa10.48□□□□□ -0.73
MSH6-215ENST00000622629 C17orf58Q2M2W7 97 aa10.48□□□□□ -0.73
MSH6-215ENST00000622629 KHDC1LQ5JSQ8 128 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms