RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 LOC100130705A0A1B0GUX0 176 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 A8MWL6 223 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF670-ZNF695F2Z2N8 137 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 H0YJW9 148 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 M0R378 163 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 MT-ND4LP03901 98 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 CRYGSP22914 178 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 HIST1H2BOP23527 126 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 ATP6V0CP27449 155 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 HIST1H2BBP33778 126 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 SDC2P34741 201 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 CXCL5P42830 114 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 GUCA1AP43080 201 aaPredicted RBP2.29□□□□□ -2.04
BRCA1-229ENST00000621897 NMUP48645 174 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 INSL3P51460 131 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 HIST1H2BDP58876 126 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 HIST1H2BCP62807 126 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 RHOGP84095 191 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 HIST2H2BEQ16778 126 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.29□□□□□ -2.04
BRCA1-229ENST00000621897 BCL2L15Q5TBC7 163 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 TMEM244Q5VVB8 128 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 LAIR2Q6ISS4 152 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 RPL22L1Q6P5R6 122 aaKnown RBP2.29□□□□□ -2.04
BRCA1-229ENST00000621897 IGFL1Q6UW32 110 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 FER1L6-AS1Q8NA97 138 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 OR2T10Q8NGZ9 312 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 DEDD2Q8WXF8 326 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 HIST1H2BHQ93079 126 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 MAL2Q969L2 176 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 HIST1H2BNQ99877 126 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 HIST1H2BMQ99879 126 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 B9D2Q9BPU9 175 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 HDHD3Q9BSH5 251 aaPredicted RBP2.29□□□□□ -2.04
BRCA1-229ENST00000621897 C1QTNF6Q9BXI9 259 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 RPP21Q9H633 154 aaKnown RBP2.29□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF286AQ9HBT8 521 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 C8orf17Q9NRJ1 99 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 CBLN4Q9NTU7 201 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 DEC1Q9P2X7 70 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 TP73-AS1Q9UF72 201 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 PHIPQ8WWQ0 1821 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 KIAA1671Q9BY89 1806 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 WNK3Q9BYP7 1800 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 ANKRD26Q9UPS8 1709 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 PZPP20742 1482 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 MYOM2P54296 1465 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 CCDC18Q5T9S5 1454 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 ARHGAP35Q9NRY4 1499 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 IGKV1D-17A0A075B6S4 117 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 IGKV1-12A0A0C4DH73 117 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 IGHV5-10-1A0A0J9YXX1 117 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 A8MWP6 167 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 C19orf84I3L1E1 186 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 BPY2O14599 106 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 CDC42EP2O14613 210 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 IGKV1D-12P01611 117 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF688P0C7X2 276 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 AKAIN1P0CW23 69 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 HIST1H1DP16402 221 aaKnown RBP2.28□□□□□ -2.04
BRCA1-229ENST00000621897 LGALS3P17931 250 aaKnown RBP2.28□□□□□ -2.04
BRCA1-229ENST00000621897 RPL22P35268 128 aaKnown RBP2.28□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF80P51504 273 aaPredicted RBP2.28□□□□□ -2.04
BRCA1-229ENST00000621897 AQP4P55087 323 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 TAS2R45P59539 299 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 BTG2P78543 158 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 LINC00483Q53H64 154 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 RNASE13Q5GAN3 156 aaKnown RBP2.28□□□□□ -2.04
BRCA1-229ENST00000621897 NCMAPQ5T1S8 102 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF880Q6PDB4 577 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 SNX29P2Q8IUI4 249 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 C9orf62Q8N4C0 152 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 OR10AC1Q8NH08 325 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 DCANP1Q8TF63 244 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 C2orf15Q8WU43 125 aaKnown RBP2.28□□□□□ -2.04
BRCA1-229ENST00000621897 RNASE6Q93091 150 aaKnown RBP2.28□□□□□ -2.04
BRCA1-229ENST00000621897 OR4C12Q96R67 309 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 CHCHD7Q9BUK0 85 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 SNHG12Q9BXW3 62 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 CCDC167Q9P0B6 97 aa2.28□□□□□ -2.04
BRCA1-229ENST00000621897 KDM5CP41229 1560 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 A2ML1A8K2U0 1454 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 ADGRL2O95490 1459 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 CEP162Q5TB80 1403 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 DSPPQ9NZW4 1301 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 IGLV11-55A0A075B6I3 123 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 IGHV3-43A0A0B4J1X8 118 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 IGHV5-51A0A0C4DH38 117 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 A0A0D9SEW6 157 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 SPAARA0A1B0GVQ0 90 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 ZNF860A6NHJ4 632 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 UBFD1O14562 309 aaKnown RBP2.27□□□□□ -2.05
BRCA1-229ENST00000621897 CST7O76096 145 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 PRM2P04554 102 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 INAFM2P0DMQ5 153 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 IGHV1-8P0DP01 117 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 S100A2P29034 98 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 UBE2AP49459 152 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 RBM11P57052 281 aaKnown RBP2.27□□□□□ -2.05
BRCA1-229ENST00000621897 QRFPP83859 136 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms