RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 CR1LQ2VPA4 569 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 ZNF329Q86UD4 541 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 DPRXA6NFQ7 191 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 TMEM155Q4W5P6 130 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 ZNF474Q6S9Z5 364 aaPredicted RBP8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 ASCL4Q6XD76 172 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 MYO7BQ6PIF6 2116 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 ANKRD36A6QL64 1941 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 IGHV1-3A0A0C4DH29 117 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 TBX6O95947 436 aaPredicted RBP8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 GATA2P23769 480 aaPredicted RBP8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 FER1L6-AS1Q8NA97 138 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 GTF3AQ92664 365 aaKnown RBP8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 RCC1LQ96I51 464 aaKnown RBP8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 COL8A2P25067 703 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 SPSB3Q6PJ21 355 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 NUDT10Q8NFP7 164 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 RNF5Q99942 180 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 OTORQ9NRC9 128 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 ABCA1O95477 2261 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 MUC21A0A0G2JKD1 596 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 MUC21A0A140T8X8 626 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 GAGE10A6NGK3 116 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 JOSD1Q15040 202 aaPredicted RBP8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 FBLN7Q53RD9 439 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 PLA2G2CQ5R387 149 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 SFRP2Q96HF1 295 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 SCN2AQ99250 2005 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 SELLP14151 372 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 USMG5Q96IX5 58 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 ROS1P08922 2347 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 PSPNO60542 156 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 MPZP25189 248 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 SRIP30626 198 aa8.09□□□□□ -1.11
CLTCL1-211ENST00000621271 MUC6Q6W4X9 2439 aa8.09□□□□□ -1.12
CLTCL1-211ENST00000621271 ZNF815PA8K554 130 aa8.09□□□□□ -1.12
CLTCL1-211ENST00000621271 MLNRO43193 412 aa8.09□□□□□ -1.12
CLTCL1-211ENST00000621271 Q6AWC8 147 aa8.09□□□□□ -1.12
CLTCL1-211ENST00000621271 IGFL3Q6UXB1 125 aa8.09□□□□□ -1.12
CLTCL1-211ENST00000621271 OR11H1Q8NG94 326 aa8.09□□□□□ -1.12
CLTCL1-211ENST00000621271 OR11H2Q8NH07 326 aa8.09□□□□□ -1.12
CLTCL1-211ENST00000621271 NEUROG1Q92886 237 aa8.09□□□□□ -1.12
CLTCL1-211ENST00000621271 BEX4Q9NWD9 120 aaPredicted RBP8.09□□□□□ -1.12
CLTCL1-211ENST00000621271 HEATR5BQ9P2D3 2071 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 A0A1B0GUT8 65 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 TFF3Q07654 80 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 DNLZQ5SXM8 178 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 FAM110DQ8TAY7 271 aaPredicted RBP8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 SCGB3A1Q96QR1 104 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 GFI1Q99684 422 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 NDUFAF3Q9BU61 184 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 RLFQ13129 1914 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 COLCA2A8K830 154 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 E7EQL1 145 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 H0YIZ8 118 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 PRCDQ00LT1 54 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 OR10J3Q5JRS4 329 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 WFDC12Q8WWY7 111 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 ZNF688P0C7X2 276 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 SAA4P35542 130 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 SLC25A34Q6PIV7 304 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 TMEM136Q6ZRR5 245 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 PAQR4Q8N4S7 273 aaPredicted RBP8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 LYZL4Q96KX0 146 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 EFNA2O43921 213 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 DUTP33316 252 aaKnown RBP8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 CTAG1AP78358 180 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 DTX1Q86Y01 620 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 FBLN5Q9UBX5 448 aa8.08□□□□□ -1.12
CLTCL1-211ENST00000621271 ZSWIM8A7E2V4 1837 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 ATP5LO75964 103 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 CCL1P22362 96 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 C5orf64Q2M2E5 130 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 MIR17HGQ75NE6 70 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 PIEZO1Q92508 2521 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 MCRIP2Q9BUT9 160 aaKnown RBP8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 TRBV7-1A0A0A6YYK4 115 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 LYPD3O95274 346 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 GHRHP01286 108 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 IFI27P40305 119 aaPredicted RBP8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 FAM131CQ96AQ9 280 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 ST20Q9HBF5 79 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 SELENOKQ9Y6D0 94 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 MTCL1Q9Y4B5 1905 aaKnown RBP8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 EGR1P18146 543 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 GATA4P43694 442 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 ACTL10Q5JWF8 245 aa8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 MBNL3Q9NUK0 354 aaKnown RBP8.07□□□□□ -1.12
CLTCL1-211ENST00000621271 A0A1B0GW15 77 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 KIAA1644Q3SXP7 199 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 FAM169BQ8N8A8 192 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 TMEM160Q9NX00 188 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 ATRXP46100 2492 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 RBMY1BA6NDE4 496 aaKnown RBP8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 RBMY1EA6NEQ0 496 aaKnown RBP8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 HIST1H2BKO60814 126 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 TMEM50AO95807 157 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 HIST1H2BJP06899 126 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 RBMY1DP0C7P1 496 aaKnown RBP8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 RBMY1A1P0DJD3 496 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms