RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 OPRK1P41145 380 aa8.32□□□□□ -1.08
CPNE3-210ENST00000621245 NPBWR1P48145 328 aa8.32□□□□□ -1.08
CPNE3-210ENST00000621245 RBMS2Q15434 407 aaKnown RBP8.32□□□□□ -1.08
CPNE3-210ENST00000621245 STEAP1BQ6NZ63 245 aa8.32□□□□□ -1.08
CPNE3-210ENST00000621245 TEPPQ6URK8 271 aa8.32□□□□□ -1.08
CPNE3-210ENST00000621245 GSG1LQ6UXU4 331 aa8.32□□□□□ -1.08
CPNE3-210ENST00000621245 Q8NAQ8 132 aa8.32□□□□□ -1.08
CPNE3-210ENST00000621245 TMEM229BQ8NBD8 167 aa8.32□□□□□ -1.08
CPNE3-210ENST00000621245 GATAD1Q8WUU5 269 aa8.32□□□□□ -1.08
CPNE3-210ENST00000621245 C11orf68Q9H3H3 251 aaKnown RBP8.32□□□□□ -1.08
CPNE3-210ENST00000621245 COPZ2Q9P299 210 aa8.32□□□□□ -1.08
CPNE3-210ENST00000621245 RABAC1Q9UI14 185 aa8.32□□□□□ -1.08
CPNE3-210ENST00000621245 ABCA13Q86UQ4 5058 aa8.32□□□□□ -1.08
CPNE3-210ENST00000621245 K7EQG2 157 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 DNASE2O00115 360 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-210ENST00000621245 CLN5O75503 358 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 RAB3DO95716 219 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 RBMY1A1P0DJD3 496 aaKnown RBP8.31□□□□□ -1.08
CPNE3-210ENST00000621245 RBMY1CP0DJD4 496 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 CRYBB3P26998 211 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 P2RY1P47900 373 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 RBMY1FQ15415 496 aaKnown RBP8.31□□□□□ -1.08
CPNE3-210ENST00000621245 AARDQ4LEZ3 155 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 MZT2AQ6P582 158 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 TRPT1Q86TN4 253 aaKnown RBP8.31□□□□□ -1.08
CPNE3-210ENST00000621245 SELENOHQ8IZQ5 122 aaKnown RBP8.31□□□□□ -1.08
CPNE3-210ENST00000621245 STXBP6Q8NFX7 210 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 OR4C16Q8NGL9 310 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 OR4X1Q8NH49 305 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 TERB2Q8NHR7 220 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 DCANP1Q8TF63 244 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 GLYATL2Q8WU03 294 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 GPR146Q96CH1 333 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 C6orf62Q9GZU0 229 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-210ENST00000621245 CLEC5AQ9NY25 188 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 CACNG5Q9UF02 275 aa8.31□□□□□ -1.08
CPNE3-210ENST00000621245 KLK5Q9Y337 293 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-210ENST00000621245 IGHV4-28A0A0C4DH34 117 aa8.3□□□□□ -1.08
CPNE3-210ENST00000621245 GABARAPH6UMI1 98 aa8.3□□□□□ -1.08
CPNE3-210ENST00000621245 IGLC1P0CG04 106 aa8.3□□□□□ -1.08
CPNE3-210ENST00000621245 TBPP20226 339 aa8.3□□□□□ -1.08
CPNE3-210ENST00000621245 TAS2R19P59542 299 aa8.3□□□□□ -1.08
CPNE3-210ENST00000621245 C4orf46Q504U0 113 aa8.3□□□□□ -1.08
CPNE3-210ENST00000621245 TMEM217Q8N7C4 229 aa8.3□□□□□ -1.08
CPNE3-210ENST00000621245 CCDC71LQ8N9Z2 235 aa8.3□□□□□ -1.08
CPNE3-210ENST00000621245 RNASE11Q8TAA1 199 aaKnown RBP8.3□□□□□ -1.08
CPNE3-210ENST00000621245 C11orf45Q8TAV5 145 aa8.3□□□□□ -1.08
CPNE3-210ENST00000621245 TMEM222Q9H0R3 208 aa8.3□□□□□ -1.08
CPNE3-210ENST00000621245 NAA60Q9H7X0 242 aa8.3□□□□□ -1.08
CPNE3-210ENST00000621245 PLA2G2DQ9UNK4 145 aa8.3□□□□□ -1.08
CPNE3-210ENST00000621245 APOBP04114 4563 aaKnown RBP8.29□□□□□ -1.08
CPNE3-210ENST00000621245 TRAV2A0A0B4J234 112 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 TEX13DA0A0J9YY54 714 aaPredicted RBP8.29□□□□□ -1.08
CPNE3-210ENST00000621245 CRYM-AS1A6NIL9 109 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 CDS2O95674 445 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 NPPCP23582 126 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 ALDH3B2P48448 385 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 RND2P52198 227 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 DEFB1P60022 68 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 PAFAH1B2P68402 229 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 TMEM187Q14656 261 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 USF2Q15853 346 aaPredicted RBP8.29□□□□□ -1.08
CPNE3-210ENST00000621245 TMEM268Q5VZI3 342 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 PRSS54Q6PEW0 395 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 ZFAND1Q8TCF1 268 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 GLMPQ8WWB7 406 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 AP3S1Q92572 193 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 TMEM230Q96A57 120 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 RRNAD1Q96FB5 475 aaKnown RBP8.29□□□□□ -1.08
CPNE3-210ENST00000621245 METTL26Q96S19 204 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 PDCD10Q9BUL8 212 aa8.29□□□□□ -1.08
CPNE3-210ENST00000621245 CORTO00230 105 aa8.28□□□□□ -1.08
CPNE3-210ENST00000621245 RPL5P46777 297 aaKnown RBP8.28□□□□□ -1.08
CPNE3-210ENST00000621245 CMC4P56277 68 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-210ENST00000621245 SPCS3P61009 180 aa8.28□□□□□ -1.08
CPNE3-210ENST00000621245 DHODHQ02127 395 aa8.28□□□□□ -1.08
CPNE3-210ENST00000621245 ACTL10Q5JWF8 245 aa8.28□□□□□ -1.08
CPNE3-210ENST00000621245 LGALS9CQ6DKI2 356 aa8.28□□□□□ -1.08
CPNE3-210ENST00000621245 STHQ8IWL8 128 aa8.28□□□□□ -1.08
CPNE3-210ENST00000621245 CSNK1G2-AS1Q8NCQ2 148 aa8.28□□□□□ -1.08
CPNE3-210ENST00000621245 SMIM4Q8WVI0 70 aa8.28□□□□□ -1.08
CPNE3-210ENST00000621245 RBPMSQ93062 196 aaKnown RBP8.28□□□□□ -1.08
CPNE3-210ENST00000621245 SCRT1Q9BWW7 348 aa8.28□□□□□ -1.08
CPNE3-210ENST00000621245 ENY2Q9NPA8 101 aa8.28□□□□□ -1.08
CPNE3-210ENST00000621245 HEYLQ9NQ87 328 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-210ENST00000621245 CELA1Q9UNI1 258 aa8.28□□□□□ -1.08
CPNE3-210ENST00000621245 RGS5O15539 181 aa8.27□□□□□ -1.09
CPNE3-210ENST00000621245 OR10J1P30954 320 aa8.27□□□□□ -1.09
CPNE3-210ENST00000621245 SUB1P53999 127 aaKnown RBP eCLIP8.27□□□□□ -1.09
CPNE3-210ENST00000621245 C16orf54Q6UWD8 224 aa8.27□□□□□ -1.09
CPNE3-210ENST00000621245 Q6ZTC4 211 aa8.27□□□□□ -1.09
CPNE3-210ENST00000621245 ZNF767PQ75MW2 155 aa8.27□□□□□ -1.09
CPNE3-210ENST00000621245 SLC24A4Q8NFF2 622 aa8.27□□□□□ -1.09
CPNE3-210ENST00000621245 OR51S1Q8NGJ8 323 aa8.27□□□□□ -1.09
CPNE3-210ENST00000621245 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.27□□□□□ -1.09
CPNE3-210ENST00000621245 APLNQ9ULZ1 77 aa8.27□□□□□ -1.09
CPNE3-210ENST00000621245 GPR132Q9UNW8 380 aa8.27□□□□□ -1.09
CPNE3-210ENST00000621245 C14orf166Q9Y224 244 aaKnown RBP8.27□□□□□ -1.09
CPNE3-210ENST00000621245 CEBPZOSA8MTT3 80 aa8.26□□□□□ -1.09
CPNE3-210ENST00000621245 ZNF705EA8MWA4 302 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms