RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 ZFP36L1Q07352 338 aaKnown RBP10.38□□□□□ -0.75
SYNRG-229ENST00000621136 TMEM164Q5U3C3 297 aa10.38□□□□□ -0.75
SYNRG-229ENST00000621136 TREML4Q6UXN2 200 aa10.38□□□□□ -0.75
SYNRG-229ENST00000621136 NPIPB13A6NJU9 1138 aa10.38□□□□□ -0.75
SYNRG-229ENST00000621136 NPIPB4C9JG80 1138 aa10.38□□□□□ -0.75
SYNRG-229ENST00000621136 RSPO1Q2MKA7 263 aaPredicted RBP10.38□□□□□ -0.75
SYNRG-229ENST00000621136 DEFB125Q8N687 156 aa10.38□□□□□ -0.75
SYNRG-229ENST00000621136 VEGFBP49765 207 aa10.38□□□□□ -0.75
SYNRG-229ENST00000621136 C3orf36Q3SXR2 165 aa10.38□□□□□ -0.75
SYNRG-229ENST00000621136 Q6ZPA2 131 aa10.38□□□□□ -0.75
SYNRG-229ENST00000621136 Q6ZS52 159 aa10.38□□□□□ -0.75
SYNRG-229ENST00000621136 OR52E5Q8NH55 327 aa10.38□□□□□ -0.75
SYNRG-229ENST00000621136 HS3ST6Q96QI5 342 aa10.38□□□□□ -0.75
SYNRG-229ENST00000621136 TMEM238LA0A1B0GVL6 79 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 TMEM189A5PLL7 270 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 A6NJY4 79 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 PDLIM4P50479 330 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 RAC3P60763 192 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 OR4X2Q8NGF9 303 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 WDR83OSQ9Y284 106 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 MPC1Q9Y5U8 109 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 ZNF441Q8N8Z8 693 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 RPP21Q9H633 154 aaKnown RBP10.37□□□□□ -0.75
SYNRG-229ENST00000621136 A0A1B0GUT8 65 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 ZNF785A8K8V0 405 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 NCR2O95944 276 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 LINC00305Q7Z4B0 112 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 C10orf126Q8N4M7 172 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 PYGO2Q9BRQ0 406 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 CELSR3Q9NYQ7 3312 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 C12orf77C9JDV5 145 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 VKORC1Q9BQB6 163 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 GGTLC1Q9BX51 225 aa10.37□□□□□ -0.75
SYNRG-229ENST00000621136 MGPP08493 103 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 CELA3BP08861 270 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 NPPCP23582 126 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 OR9G1Q8NH87 305 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 PCNX1Q96RV3 2341 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 IGHV3-35A0A0C4DH35 117 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 RNPS1Q15287 305 aaKnown RBP10.36□□□□□ -0.75
SYNRG-229ENST00000621136 TMEM249Q2WGJ8 235 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 WDR82Q6UXN9 313 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 PLSCR4Q9NRQ2 329 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 IGKV3-7A0A075B6H7 116 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 TNFSF15O95150 251 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 HERVK_113P61574 105 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 SRSF7Q16629 238 aaKnown RBP eCLIP10.36□□□□□ -0.75
SYNRG-229ENST00000621136 FAM53AQ6NSI3 398 aaPredicted RBP10.36□□□□□ -0.75
SYNRG-229ENST00000621136 MS4A6AQ9H2W1 248 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 FREM1Q5H8C1 2179 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 EVI2AP22794 236 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 RPL30P62888 115 aaKnown RBP10.36□□□□□ -0.75
SYNRG-229ENST00000621136 MOB3BQ86TA1 216 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 C11orf1Q9H5F2 150 aa10.36□□□□□ -0.75
SYNRG-229ENST00000621136 HSPE1P61604 102 aaKnown RBP10.35□□□□□ -0.75
SYNRG-229ENST00000621136 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.35□□□□□ -0.75
SYNRG-229ENST00000621136 ZBTB34Q8NCN2 500 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 OR5AN1Q8NGI8 311 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 LINC00470Q9BZP3 86 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 IGHV4-39P01824 125 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 MYOD1P15172 320 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 SPACA3Q8IXA5 215 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 IFI27L1Q96BM0 104 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 COQ2Q96H96 371 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 VPS13AQ96RL7 3174 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 A0A1W2PPM0 123 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 OR9G9P0C7N8 305 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 SRFP11831 508 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 HERV-K104P63124 156 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 C1orf53Q5VUE5 145 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 MAP1LC3AQ9H492 121 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 RNF115Q9Y4L5 304 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 FRYLO94915 3013 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 FRYQ5TBA9 3013 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 AGFG2O95081 481 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 NBEAP1P0C6P0 100 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 WFDC2Q14508 124 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 CFAP161Q6P656 301 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 RBPMS2Q6ZRY4 209 aaKnown RBP10.35□□□□□ -0.75
SYNRG-229ENST00000621136 NEUROG1Q92886 237 aa10.35□□□□□ -0.75
SYNRG-229ENST00000621136 TMEM14EPQ6UXP3 125 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 C20orf204Q6ZNR8 217 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.34□□□□□ -0.75
SYNRG-229ENST00000621136 PAX1P15863 534 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 NTF4P34130 210 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 MLANAQ16655 118 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 TMEM155Q4W5P6 130 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 SPINK14Q6IE38 97 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 JMJD8Q96S16 334 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 MGST2Q99735 147 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 INSIG2Q9Y5U4 225 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 S4R3C0 116 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 COL4A2P08572 1712 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 hCG_38984A0A1B0GV85 526 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 COL6A6A6NMZ7 2263 aa10.34□□□□□ -0.75
SYNRG-229ENST00000621136 H3BRM9 83 aa10.33□□□□□ -0.76
SYNRG-229ENST00000621136 SPEM1Q8N4L4 309 aa10.33□□□□□ -0.76
SYNRG-229ENST00000621136 FAM168AQ92567 244 aa10.33□□□□□ -0.76
SYNRG-229ENST00000621136 PRNDQ9UKY0 176 aa10.33□□□□□ -0.76
SYNRG-229ENST00000621136 PCNX2A6NKB5 2137 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms