RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 HARBI1Q96MB7 349 aa8.8□□□□□ -1
CDH1-214ENST00000621016 OR2V2Q96R30 315 aa8.8□□□□□ -1
CDH1-214ENST00000621016 UFC1Q9Y3C8 167 aa8.8□□□□□ -1
CDH1-214ENST00000621016 WNK2Q9Y3S1 2297 aa8.8□□□□□ -1
CDH1-214ENST00000621016 CUL9Q8IWT3 2517 aa8.8□□□□□ -1
CDH1-214ENST00000621016 TRBV6-6A0A0A6YYG2 114 aa8.8□□□□□ -1
CDH1-214ENST00000621016 CTXND1A0A1B0GTU2 59 aa8.8□□□□□ -1
CDH1-214ENST00000621016 IQCF6A8MYZ5 107 aa8.8□□□□□ -1
CDH1-214ENST00000621016 CHEK1O14757 476 aa8.8□□□□□ -1
CDH1-214ENST00000621016 HSBP1O75506 76 aa8.8□□□□□ -1
CDH1-214ENST00000621016 PRB3Q04118 309 aaPredicted RBP8.8□□□□□ -1
CDH1-214ENST00000621016 RNASEKQ6P5S7 137 aaKnown RBP8.8□□□□□ -1
CDH1-214ENST00000621016 OR2T6Q8NHC8 308 aa8.8□□□□□ -1
CDH1-214ENST00000621016 PSMG3Q9BT73 122 aaPredicted RBP8.8□□□□□ -1
CDH1-214ENST00000621016 NPFFR1Q9GZQ6 430 aa8.8□□□□□ -1
CDH1-214ENST00000621016 ZNF292O60281 2723 aa8.8□□□□□ -1
CDH1-214ENST00000621016 PROP1O75360 226 aa8.8□□□□□ -1
CDH1-214ENST00000621016 ZNF324O75467 553 aaPredicted RBP8.8□□□□□ -1
CDH1-214ENST00000621016 TYMSP04818 313 aa8.8□□□□□ -1
CDH1-214ENST00000621016 NPPCP23582 126 aa8.8□□□□□ -1
CDH1-214ENST00000621016 MSMPQ1L6U9 139 aa8.8□□□□□ -1
CDH1-214ENST00000621016 MOB3BQ86TA1 216 aa8.8□□□□□ -1
CDH1-214ENST00000621016 MUC6Q6W4X9 2439 aa8.79□□□□□ -1
CDH1-214ENST00000621016 K7EMI3 77 aa8.79□□□□□ -1
CDH1-214ENST00000621016 M0R2Z0 102 aa8.79□□□□□ -1
CDH1-214ENST00000621016 ERVK-16P61578 105 aa8.79□□□□□ -1
CDH1-214ENST00000621016 WDR31Q8NA23 367 aa8.79□□□□□ -1
CDH1-214ENST00000621016 GCM1Q9NP62 436 aa8.79□□□□□ -1
CDH1-214ENST00000621016 HCFC1P51610 2035 aa8.79□□□□□ -1
CDH1-214ENST00000621016 TRAV1-1A0A0B4J248 108 aa8.79□□□□□ -1
CDH1-214ENST00000621016 ARL14EPLP0DKL9 152 aa8.79□□□□□ -1
CDH1-214ENST00000621016 REG1BP48304 166 aa8.79□□□□□ -1
CDH1-214ENST00000621016 INSL3P51460 131 aa8.79□□□□□ -1
CDH1-214ENST00000621016 EBLN2Q6P2I7 272 aa8.79□□□□□ -1
CDH1-214ENST00000621016 INO80CQ6PI98 192 aaPredicted RBP8.79□□□□□ -1
CDH1-214ENST00000621016 SLC25A34Q6PIV7 304 aa8.79□□□□□ -1
CDH1-214ENST00000621016 OR10AG1Q8NH19 301 aa8.79□□□□□ -1
CDH1-214ENST00000621016 OR8B2Q96RD0 313 aa8.79□□□□□ -1
CDH1-214ENST00000621016 S1PR3Q99500 378 aa8.79□□□□□ -1
CDH1-214ENST00000621016 OR4C46A6NHA9 309 aa8.79□□□□□ -1
CDH1-214ENST00000621016 BMPR1BO00238 502 aa8.79□□□□□ -1
CDH1-214ENST00000621016 PRB4P10163 310 aaPredicted RBP8.79□□□□□ -1
CDH1-214ENST00000621016 OR5B3Q8NH48 314 aa8.79□□□□□ -1
CDH1-214ENST00000621016 NEIL1Q96FI4 390 aaPredicted RBP8.79□□□□□ -1
CDH1-214ENST00000621016 MRAP2Q96G30 205 aa8.79□□□□□ -1
CDH1-214ENST00000621016 APELAP0DMC3 54 aa8.78□□□□□ -1
CDH1-214ENST00000621016 LCN2P80188 198 aa8.78□□□□□ -1
CDH1-214ENST00000621016 MLANAQ16655 118 aa8.78□□□□□ -1
CDH1-214ENST00000621016 ETDBQ3ZM63 59 aa8.78□□□□□ -1
CDH1-214ENST00000621016 CD300EQ496F6 205 aaPredicted RBP8.78□□□□□ -1
CDH1-214ENST00000621016 MS4A5Q9H3V2 200 aa8.78□□□□□ -1
CDH1-214ENST00000621016 JKAMPQ9P055 326 aa8.78□□□□□ -1
CDH1-214ENST00000621016 RALYQ9UKM9 306 aaKnown RBP8.78□□□□□ -1
CDH1-214ENST00000621016 IGF2RP11717 2491 aa8.78□□□□□ -1
CDH1-214ENST00000621016 IGKV1D-17A0A075B6S4 117 aa8.78□□□□□ -1
CDH1-214ENST00000621016 IGHV1-18A0A0C4DH31 117 aa8.78□□□□□ -1
CDH1-214ENST00000621016 C15orf62A8K5M9 175 aa8.78□□□□□ -1
CDH1-214ENST00000621016 PPIFP30405 207 aaKnown RBP8.78□□□□□ -1
CDH1-214ENST00000621016 CCL8P80075 99 aa8.78□□□□□ -1
CDH1-214ENST00000621016 FXYD3Q14802 87 aa8.78□□□□□ -1
CDH1-214ENST00000621016 SLC35E4Q6ICL7 350 aa8.78□□□□□ -1
CDH1-214ENST00000621016 LINC00173Q6ZV60 143 aa8.78□□□□□ -1
CDH1-214ENST00000621016 OR8B3Q8NGG8 313 aa8.78□□□□□ -1
CDH1-214ENST00000621016 ITLN1Q8WWA0 313 aa8.78□□□□□ -1
CDH1-214ENST00000621016 PROCRQ9UNN8 238 aa8.78□□□□□ -1
CDH1-214ENST00000621016 NAV3Q8IVL0 2385 aa8.78□□□□□ -1
CDH1-214ENST00000621016 C17orf112F2Z3M2 114 aa8.77□□□□□ -1
CDH1-214ENST00000621016 FOXH1O75593 365 aa8.77□□□□□ -1
CDH1-214ENST00000621016 RPS20P60866 119 aaKnown RBP8.77□□□□□ -1
CDH1-214ENST00000621016 TNXAQ16473 311 aa8.77□□□□□ -1
CDH1-214ENST00000621016 C12orf54Q6X4T0 127 aa8.77□□□□□ -1
CDH1-214ENST00000621016 ADAMTSL5Q6ZMM2 481 aa8.77□□□□□ -1
CDH1-214ENST00000621016 C1orf229Q6ZS94 237 aaPredicted RBP8.77□□□□□ -1
CDH1-214ENST00000621016 TSKUQ8WUA8 353 aa8.77□□□□□ -1
CDH1-214ENST00000621016 CCL13Q99616 98 aa8.77□□□□□ -1
CDH1-214ENST00000621016 CD5LO43866 347 aa8.77□□□□□ -1.01
CDH1-214ENST00000621016 DUTP33316 252 aaKnown RBP8.77□□□□□ -1.01
CDH1-214ENST00000621016 SSX8Q7RTT4 187 aa8.77□□□□□ -1.01
CDH1-214ENST00000621016 KCNS1Q96KK3 526 aa8.77□□□□□ -1.01
CDH1-214ENST00000621016 TAAR6Q96RI8 345 aa8.77□□□□□ -1.01
CDH1-214ENST00000621016 TMEM140Q9NV12 185 aa8.77□□□□□ -1.01
CDH1-214ENST00000621016 SCO2A0A1W2PP80 73 aa8.77□□□□□ -1.01
CDH1-214ENST00000621016 HTR1DP28221 377 aa8.77□□□□□ -1.01
CDH1-214ENST00000621016 GNB1P62873 340 aa8.77□□□□□ -1.01
CDH1-214ENST00000621016 C19orf35Q6ZS72 473 aa8.77□□□□□ -1.01
CDH1-214ENST00000621016 A0A0G2JLM5 398 aa8.76□□□□□ -1.01
CDH1-214ENST00000621016 NPIPB11E5RHQ5 1161 aa8.76□□□□□ -1.01
CDH1-214ENST00000621016 FAM27E3Q08E93 113 aa8.76□□□□□ -1.01
CDH1-214ENST00000621016 WFDC2Q14508 124 aa8.76□□□□□ -1.01
CDH1-214ENST00000621016 NEGR1Q7Z3B1 354 aa8.76□□□□□ -1.01
CDH1-214ENST00000621016 Q8TCH9 128 aa8.76□□□□□ -1.01
CDH1-214ENST00000621016 P2RX4Q99571 388 aa8.76□□□□□ -1.01
CDH1-214ENST00000621016 PIGBOS1A0A0B4J2F0 54 aa8.76□□□□□ -1.01
CDH1-214ENST00000621016 RPL32P62910 135 aaKnown RBP8.76□□□□□ -1.01
CDH1-214ENST00000621016 SP5Q6BEB4 398 aaPredicted RBP8.76□□□□□ -1.01
CDH1-214ENST00000621016 GCSAMQ8N6F7 178 aa8.76□□□□□ -1.01
CDH1-214ENST00000621016 FAM216BQ8N7L0 139 aa8.76□□□□□ -1.01
CDH1-214ENST00000621016 OR10G8Q8NGN5 311 aa8.76□□□□□ -1.01
CDH1-214ENST00000621016 HSD17B10Q99714 261 aaKnown RBP8.76□□□□□ -1.01
CDH1-214ENST00000621016 ENY2Q9NPA8 101 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms