RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 FBXL15Q9H469 300 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 TAF1LQ8IZX4 1826 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 QSER1Q2KHR3 1735 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 IL18BPO95998 194 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 CELA3BP08861 270 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 SELLP14151 372 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 TMEM126AQ9H061 195 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 PEMTQ9UBM1 199 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 RNF115Q9Y4L5 304 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 FRMPD3Q5JV73 1810 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 A0A1B0GTI1 187 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 CSRP1P21291 193 aaKnown RBP6.04□□□□□ -1.44
COLCA1-205ENST00000620864 C20orf144Q9BQM9 153 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 FOXD3Q9UJU5 478 aaPredicted RBP6.04□□□□□ -1.44
COLCA1-205ENST00000620864 IGKV3-20P01619 116 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 C1QAP02745 245 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 IGFBP3P17936 291 aaPredicted RBP6.03□□□□□ -1.44
COLCA1-205ENST00000620864 VGLL1Q99990 258 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 A0A1W2PQF6 199 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 MMP23AO75900 390 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 HAPLN4Q86UW8 402 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 ZNF525Q8N782 197 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 RAMP1O60894 148 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 TEX38Q6PEX7 206 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 ABCA1O95477 2261 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 ABHD12Q8N2K0 398 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 IGLV1-36A0A0B4J1U3 117 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 OVOL1O14753 267 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 EGR4Q05215 589 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 C15orf53Q8NAA6 179 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 ACYP1P07311 99 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 SRSF7Q16629 238 aaKnown RBP eCLIP6.03□□□□□ -1.44
COLCA1-205ENST00000620864 SAP25Q8TEE9 199 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 ITLN2Q8WWU7 325 aaPredicted RBP6.03□□□□□ -1.44
COLCA1-205ENST00000620864 CCL13Q99616 98 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 FOXH1O75593 365 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 C21orf62Q9NYP8 219 aa6.03□□□□□ -1.44
COLCA1-205ENST00000620864 PRR32B1ATL7 298 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 TIMP3P35625 211 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 FAM89BQ8N5H3 189 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 FBLN5Q9UBX5 448 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 PIKFYVEQ9Y2I7 2098 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 GAGE12JA6NER3 117 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 GAGE7O76087 117 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 GAGE12FP0CL80 117 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 GAGE12GP0CL81 117 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 GAGE12IP0CL82 117 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 EVI2AP22794 236 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 GAGE4Q13068 117 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 FAM214BQ7L5A3 538 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 GATD1Q8NB37 220 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 COLCA2A8K830 154 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 SAA1P0DJI8 122 aaPredicted RBP6.02□□□□□ -1.45
COLCA1-205ENST00000620864 GUSBP1Q15486 140 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 CD300EQ496F6 205 aaPredicted RBP6.02□□□□□ -1.45
COLCA1-205ENST00000620864 RNF114Q9Y508 228 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 ADAMTS7Q9UKP4 1686 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 PDCD11Q14690 1871 aaKnown RBP6.02□□□□□ -1.45
COLCA1-205ENST00000620864 LOC105371242A0A075B767 164 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 PPIAL4CA0A0B4J2A2 164 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 RNF222A6NCQ9 220 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 PPIAL4GP0DN37 164 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 ZNF721Q8TF20 911 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 ADARB2-AS1A8MUL3 147 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 IGHG4P01861 327 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 LINC00158P58513 81 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 DMRTC2Q8IXT2 367 aaPredicted RBP6.02□□□□□ -1.45
COLCA1-205ENST00000620864 LINC01560Q8TB33 94 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 OR5P3Q8WZ94 311 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 FAM168AQ92567 244 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 C18orf12Q96KH6 178 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 GFRA4Q9GZZ7 299 aa6.02□□□□□ -1.45
COLCA1-205ENST00000620864 IGHV3-72A0A0B4J1Y9 119 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 SPATA31B1PQ5VZV4 182 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 ASPHD2Q6ICH7 369 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 TPRX1Q8N7U7 411 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 Q96MF0 132 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 V9GYY9 64 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 LOC102723996A0A087X1L8 192 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 GAGE5Q13069 117 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 GAGE6Q13070 117 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 SDK2Q58EX2 2172 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 SCARF2Q96GP6 870 aaPredicted RBP6.01□□□□□ -1.45
COLCA1-205ENST00000620864 KLK5Q9Y337 293 aaPredicted RBP6.01□□□□□ -1.45
COLCA1-205ENST00000620864 TSC2P49815 1807 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 TCRBV4S1A1TA0A5B7 111 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 SYS1-DBNDD2H3BUS1 97 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 J3QL48 77 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 PSG3Q16557 428 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 OXLD1Q5BKU9 147 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 TEX43Q6ZNM6 134 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 CKAP5Q14008 2032 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 LOC101059948A0A1B0GTJ6 334 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 C9orf118A6NHY6 69 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 H3BQ85 93 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 VCYO14598 125 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 ATP5G3P48201 142 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 PCOLCEQ15113 449 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 MRPL23Q16540 153 aaKnown RBP6.01□□□□□ -1.45
COLCA1-205ENST00000620864 TAL2Q16559 108 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms