RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TCRBV4S1A1TA0A5B7 111 aa15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 IGLC7A0M8Q6 106 aa15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 NKX6-3A6NJ46 265 aa15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 INS-IGF2F8WCM5 200 aa15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 TM4SF5O14894 197 aa15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 CCL11P51671 97 aa15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 ZNF788Q6ZQV5 615 aa15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 MUC15Q8N387 334 aa15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 NAV3Q8IVL0 2385 aa15.81■□□□□ 0.12
PDLIM3-212ENST00000620787 IGHV1-69-2A0A0G2JMI3 117 aa15.81■□□□□ 0.12
PDLIM3-212ENST00000620787 CDX4O14627 284 aaPredicted RBP15.81■□□□□ 0.12
PDLIM3-212ENST00000620787 UBE2V1Q13404 147 aa15.81■□□□□ 0.12
PDLIM3-212ENST00000620787 FAM120AOSQ5T036 256 aa15.81■□□□□ 0.12
PDLIM3-212ENST00000620787 ZNF738Q8NE65 137 aa15.81■□□□□ 0.12
PDLIM3-212ENST00000620787 RNASE8Q8TDE3 154 aaKnown RBP15.81■□□□□ 0.12
PDLIM3-212ENST00000620787 NPIPB3Q92617 1050 aa15.81■□□□□ 0.12
PDLIM3-212ENST00000620787 CLEC5AQ9NY25 188 aa15.81■□□□□ 0.12
PDLIM3-212ENST00000620787 CGB1A6NKQ9 187 aa15.8■□□□□ 0.12
PDLIM3-212ENST00000620787 BPIFB3P59826 476 aa15.8■□□□□ 0.12
PDLIM3-212ENST00000620787 PRR31Q5SQ13 230 aa15.8■□□□□ 0.12
PDLIM3-212ENST00000620787 LEMD1Q68G75 181 aa15.8■□□□□ 0.12
PDLIM3-212ENST00000620787 ARFGEF3Q5TH69 2177 aa15.8■□□□□ 0.12
PDLIM3-212ENST00000620787 WT1-ASQ06250 92 aa15.8■□□□□ 0.12
PDLIM3-212ENST00000620787 MRPL36Q9P0J6 103 aaKnown RBP15.8■□□□□ 0.12
PDLIM3-212ENST00000620787 LOC400499M0QZD8 3231 aa15.8■□□□□ 0.12
PDLIM3-212ENST00000620787 IGHV3-48P01763 117 aa15.79■□□□□ 0.12
PDLIM3-212ENST00000620787 APOA2P02652 100 aa15.79■□□□□ 0.12
PDLIM3-212ENST00000620787 SEM1Q6ZVN7 128 aa15.79■□□□□ 0.12
PDLIM3-212ENST00000620787 THAP8Q8NA92 274 aa15.79■□□□□ 0.12
PDLIM3-212ENST00000620787 ZNF596Q8TC21 504 aa15.79■□□□□ 0.12
PDLIM3-212ENST00000620787 ICE1Q9Y2F5 2266 aa15.79■□□□□ 0.12
PDLIM3-212ENST00000620787 SH2D7A6NKC9 451 aaPredicted RBP15.79■□□□□ 0.12
PDLIM3-212ENST00000620787 NKX2-8O15522 239 aa15.79■□□□□ 0.12
PDLIM3-212ENST00000620787 TNFAIP6P98066 277 aaPredicted RBP15.79■□□□□ 0.12
PDLIM3-212ENST00000620787 TMEM177Q53S58 311 aa15.79■□□□□ 0.12
PDLIM3-212ENST00000620787 TMEM70Q9BUB7 260 aa15.79■□□□□ 0.12
PDLIM3-212ENST00000620787 EPDR1Q9UM22 224 aa15.79■□□□□ 0.12
PDLIM3-212ENST00000620787 PLAUP00749 431 aa15.78■□□□□ 0.12
PDLIM3-212ENST00000620787 IGHV1-46P01743 117 aa15.78■□□□□ 0.12
PDLIM3-212ENST00000620787 SRSF6Q13247 344 aaKnown RBP15.78■□□□□ 0.12
PDLIM3-212ENST00000620787 C10orf55Q5SWW7 151 aa15.78■□□□□ 0.12
PDLIM3-212ENST00000620787 TCF24Q7RTU0 167 aa15.78■□□□□ 0.12
PDLIM3-212ENST00000620787 SGK494Q96LW2 274 aa15.78■□□□□ 0.12
PDLIM3-212ENST00000620787 NCOR1O75376 2440 aa15.78■□□□□ 0.12
PDLIM3-212ENST00000620787 LINC00305Q7Z4B0 112 aa15.78■□□□□ 0.12
PDLIM3-212ENST00000620787 OR2D3Q8NGH3 330 aa15.78■□□□□ 0.12
PDLIM3-212ENST00000620787 GUCD1Q96NT3 240 aa15.78■□□□□ 0.12
PDLIM3-212ENST00000620787 KLF12Q9Y4X4 402 aa15.78■□□□□ 0.12
PDLIM3-212ENST00000620787 RBX1P62877 108 aa15.77■□□□□ 0.12
PDLIM3-212ENST00000620787 HBBP68871 147 aa15.77■□□□□ 0.12
PDLIM3-212ENST00000620787 TIMM23BQ5SRD1 257 aa15.77■□□□□ 0.12
PDLIM3-212ENST00000620787 SSX8Q7RTT4 187 aa15.77■□□□□ 0.12
PDLIM3-212ENST00000620787 OR5AN1Q8NGI8 311 aa15.77■□□□□ 0.12
PDLIM3-212ENST00000620787 TMEM167AQ8TBQ9 72 aa15.77■□□□□ 0.12
PDLIM3-212ENST00000620787 hADV38S2A0JD32 116 aa15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 CRXO43186 299 aaPredicted RBP15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 SLC25A5P05141 298 aaKnown RBP15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 WT1P19544 449 aaPredicted RBP15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 IGFL2Q6UWQ7 119 aa15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 LINC00322Q6ZN03 302 aaPredicted RBP15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 PDPNQ86YL7 162 aa15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 SMIM12Q96EX1 92 aa15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 MLST8Q9BVC4 326 aa15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 RPP21Q9H633 154 aaKnown RBP15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 C1RLQ9NZP8 487 aa15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 TP73-AS1Q9UF72 201 aa15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 LINC00312Q9Y6C7 94 aa15.77■□□□□ 0.11
PDLIM3-212ENST00000620787 LOC105371242A0A075B767 164 aa15.76■□□□□ 0.11
PDLIM3-212ENST00000620787 M0QZ24 198 aa15.76■□□□□ 0.11
PDLIM3-212ENST00000620787 ZNF474Q6S9Z5 364 aaPredicted RBP15.76■□□□□ 0.11
PDLIM3-212ENST00000620787 FLYWCH2Q96CP2 140 aaKnown RBP15.76■□□□□ 0.11
PDLIM3-212ENST00000620787 TRAV17A0A0B4J275 112 aa15.76■□□□□ 0.11
PDLIM3-212ENST00000620787 OR4C46A6NHA9 309 aa15.76■□□□□ 0.11
PDLIM3-212ENST00000620787 MOSP00540 346 aa15.76■□□□□ 0.11
PDLIM3-212ENST00000620787 CA7P43166 264 aa15.76■□□□□ 0.11
PDLIM3-212ENST00000620787 REG1BP48304 166 aa15.76■□□□□ 0.11
PDLIM3-212ENST00000620787 RBMXL3Q8N7X1 1067 aaKnown RBP15.76■□□□□ 0.11
PDLIM3-212ENST00000620787 BLNKQ8WV28 456 aa15.76■□□□□ 0.11
PDLIM3-212ENST00000620787 PRSS22Q9GZN4 317 aa15.76■□□□□ 0.11
PDLIM3-212ENST00000620787 SVILO95425 2214 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 MBD3L4A6NDZ8 208 aaPredicted RBP15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 MBD3L3A6NE82 208 aaPredicted RBP15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 MBD3L5A6NJ08 208 aaPredicted RBP15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 K7EP13 123 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 TNFSF4P23510 183 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 CD24P25063 80 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 FAM162BQ5T6X4 162 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 LINC00173Q6ZV60 143 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 MBD3L2Q8NHZ7 208 aaPredicted RBP15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 GTSF1Q8WW33 167 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 ST6GALNAC6Q969X2 333 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 GPR82Q96P67 336 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 PLCE1Q9P212 2302 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 IGHV1-24A0A0C4DH33 117 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 PGPA6NDG6 321 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 FOXA3P55318 350 aaPredicted RBP15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 PLA2G2CQ5R387 149 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 TEX36Q5VZQ5 186 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 OR4A5Q8NH83 315 aa15.75■□□□□ 0.11
PDLIM3-212ENST00000620787 IGHV2-70DA0A0C4DH43 119 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms