RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 FAM159AQ6UWV7 190 aa4.19□□□□□ -1.74
VPS13D-214ENST00000620676 DKK2Q9UBU2 259 aa4.19□□□□□ -1.74
VPS13D-214ENST00000620676 DOT1LQ8TEK3 1739 aa4.19□□□□□ -1.74
VPS13D-214ENST00000620676 K7EN84 100 aa4.19□□□□□ -1.74
VPS13D-214ENST00000620676 FOXS1O43638 330 aa4.19□□□□□ -1.74
VPS13D-214ENST00000620676 EIF4EBP2Q13542 120 aaPredicted RBP4.19□□□□□ -1.74
VPS13D-214ENST00000620676 Q8IYB0 196 aa4.19□□□□□ -1.74
VPS13D-214ENST00000620676 TRAV8-3A0A0A6YYJ7 113 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 ID3Q02535 119 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 ORMDL3Q8N138 153 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 ZNF714Q96N38 554 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 SRXN1Q9BYN0 137 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 SYNGR3O43761 229 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 NEUROG1Q92886 237 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 DOCK2Q92608 1830 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 KLK10O43240 276 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 RPL27AP46776 148 aaKnown RBP4.18□□□□□ -1.74
VPS13D-214ENST00000620676 DUX5Q96PT3 197 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 PSME4Q14997 1843 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 KIR2DL5BA0A0G2JN68 375 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 KIR2DL5BA0A0G2JPC4 375 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 TMEM213A2RRL7 107 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 KIR2DL5AQ8N109 375 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 C18orf32Q8TCD1 76 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 PHLDA3Q9Y5J5 127 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 ADARB2-AS1A8MUL3 147 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 DGAT2L7PQ6IED9 249 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 NXT2Q9NPJ8 142 aaKnown RBP4.18□□□□□ -1.74
VPS13D-214ENST00000620676 IGLC1P0CG04 106 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 SUMO3P55854 103 aaPredicted RBP4.18□□□□□ -1.74
VPS13D-214ENST00000620676 NXPH1P58417 271 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 CHTOPQ9Y3Y2 248 aaKnown RBP4.18□□□□□ -1.74
VPS13D-214ENST00000620676 LOXL2Q9Y4K0 774 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 SRSF2Q01130 221 aaKnown RBP4.18□□□□□ -1.74
VPS13D-214ENST00000620676 Q0VG73 95 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 PPP1R32Q7Z5V6 425 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 TM2D1Q9BX74 207 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 TRACP01848 142 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 ARFGEF3Q5TH69 2177 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 TRAV26-2A0A0B4J265 109 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 ZNF562Q6V9R5 426 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 MAFAQ8NHW3 353 aaPredicted RBP4.18□□□□□ -1.74
VPS13D-214ENST00000620676 PPDPFLQ8WWR9 84 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 LIME1Q9H400 295 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 RPL15P61313 204 aaKnown RBP4.18□□□□□ -1.74
VPS13D-214ENST00000620676 TRAV24A0A0B4J272 114 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 DOCK11Q5JSL3 2073 aa4.18□□□□□ -1.74
VPS13D-214ENST00000620676 TRAV9-1A0A075B6T8 112 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 F2RL2O00254 374 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 TMEM78Q5T7P6 136 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 KIR2DL4Q99706 377 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 DLEC1Q9Y238 1755 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 PAPPAQ13219 1627 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 ATP5LO75964 103 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 HBDP02042 147 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 TCRAP04437 139 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 A0A0U1RQV1 116 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 A0A1W2PR77 199 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 HLA-DRB4P13762 266 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 LGALS7P47929 136 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 CFHR5Q9BXR6 569 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 ERG28Q9UKR5 140 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 HLA-DRB4X5D2U9 266 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 MLANAQ16655 118 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 C15orf53Q8NAA6 179 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 OR9G4Q8NGQ1 327 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 IFI27L2Q9H2X8 130 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 YPEL5P62699 121 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 Q6ZS52 159 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 SPEM1Q8N4L4 309 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 TRAV40A0A0B4J280 105 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 MAGEA5P43359 124 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 MORN5Q5VZ52 161 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 LYZL1Q6UWQ5 148 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 DNM1P46Q6ZS02 220 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 TRIP12Q14669 1992 aaPredicted RBP4.17□□□□□ -1.74
VPS13D-214ENST00000620676 TNFAIP6P98066 277 aaPredicted RBP4.17□□□□□ -1.74
VPS13D-214ENST00000620676 C6orf15Q6UXA7 325 aaPredicted RBP4.17□□□□□ -1.74
VPS13D-214ENST00000620676 PILRAQ9UKJ1 303 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 C9JCJ5 164 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 J3QT63 122 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 C20orf204Q6ZNR8 217 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 CACNG8Q8WXS5 425 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 C16orf92Q96LL3 132 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 TTTY13Q9BZ97 58 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 NHSQ6T4R5 1651 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 ARHGEF17Q96PE2 2063 aaPredicted RBP4.17□□□□□ -1.74
VPS13D-214ENST00000620676 NBEAP1P0C6P0 100 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 COX8AP10176 69 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 SF3B5Q9BWJ5 86 aaKnown RBP4.17□□□□□ -1.74
VPS13D-214ENST00000620676 SCN5AQ14524 2016 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 NPIPB13A6NJU9 1138 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 NPIPB4C9JG80 1138 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 SPRY2O43597 315 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 NDUFB3O43676 98 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 IGKV1D-33P01593 117 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 IGKV1-33P01594 117 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 PTH2Q96A98 100 aa4.17□□□□□ -1.74
VPS13D-214ENST00000620676 MRPL20Q9BYC9 149 aaKnown RBP4.17□□□□□ -1.74
VPS13D-214ENST00000620676 HES7Q9BYE0 225 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms