RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 FDCSPQ8NFU4 85 aa8.83□□□□□ -1
UPF3A-212ENST00000619079 Q8TCH9 128 aa8.83□□□□□ -1
UPF3A-212ENST00000619079 FNDC4Q9H6D8 234 aaPredicted RBP8.83□□□□□ -1
UPF3A-212ENST00000619079 JKAMPQ9P055 326 aa8.83□□□□□ -1
UPF3A-212ENST00000619079 ESPL1Q14674 2120 aa8.83□□□□□ -1
UPF3A-212ENST00000619079 ATMQ13315 3056 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 IGHV3-43A0A0B4J1X8 118 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 SH2D7A6NKC9 451 aaPredicted RBP8.82□□□□□ -1
UPF3A-212ENST00000619079 PEX7O00628 323 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 RFPL3SP0C7P2 107 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 IGHV3-43DP0DP04 118 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 CEBPDP49716 269 aaPredicted RBP8.82□□□□□ -1
UPF3A-212ENST00000619079 LINC00696Q6ZRV3 163 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 OR10AG1Q8NH19 301 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 NDFIP1Q9BT67 221 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 TMEM14BQ9NUH8 114 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 JPT1Q9UK76 154 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 BOD1L1Q8NFC6 3051 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 A0A1B0GV72 72 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 A8MWL6 223 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 AHRRA9YTQ3 701 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 MRPL49Q13405 166 aaKnown RBP8.82□□□□□ -1
UPF3A-212ENST00000619079 ABHD17BQ5VST6 288 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 LINC00173Q6ZV60 143 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 TUSC5Q8IXB3 177 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 VKORC1L1Q8N0U8 176 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 ABI3Q9P2A4 366 aa8.82□□□□□ -1
UPF3A-212ENST00000619079 TRAV3A0A0B4J244 114 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 DEFB108AA8MXU0 73 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 TBC1D28Q2M2D7 210 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 OR13A1Q8NGR1 328 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 OR1N2Q8NGR9 330 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 VSTM2AQ8TAG5 236 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 PRORYQ9H606 182 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 GNG12Q9UBI6 72 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 A0A0G2JLM5 398 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.81□□□□□ -1
UPF3A-212ENST00000619079 GRPP07492 148 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 FAM87AP0C7U9 286 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 HOXC12P31275 282 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 FOXG1P55316 489 aaPredicted RBP8.81□□□□□ -1
UPF3A-212ENST00000619079 FOXA3P55318 350 aaPredicted RBP8.81□□□□□ -1
UPF3A-212ENST00000619079 PLP1P60201 277 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 HSD52Q0P140 79 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 WFDC8Q8IUA0 241 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 OR9G4Q8NGQ1 327 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 GFRA4Q9GZZ7 299 aa8.81□□□□□ -1
UPF3A-212ENST00000619079 RPP21Q9H633 154 aaKnown RBP8.81□□□□□ -1
UPF3A-212ENST00000619079 PCSK5Q92824 1860 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 C15orf65H3BRN8 121 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 H3BUT2 72 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 PROP1O75360 226 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 PRSS57Q6UWY2 283 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 RFESDQ8TAC1 157 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 LRRC29Q8WV35 223 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 C7orf69Q9H7B7 122 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 SMPXQ9UHP9 88 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 PKD1L2Q7Z442 2459 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 MED12LQ86YW9 2145 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 ZNF329Q86UD4 541 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 ABHD17AQ96GS6 310 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 ADTRPQ96IZ2 230 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 LINC00479Q96M42 142 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 NPFFR1Q9GZQ6 430 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 PRNDQ9UKY0 176 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 BOKQ9UMX3 212 aaPredicted RBP8.8□□□□□ -1
UPF3A-212ENST00000619079 ZNF257Q9Y2Q1 563 aa8.8□□□□□ -1
UPF3A-212ENST00000619079 CACNA1BQ00975 2339 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 PSMB11A5LHX3 300 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 IQCF6A8MYZ5 107 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 CHEK1O14757 476 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 SIVA1O15304 175 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 ACP7Q6ZNF0 438 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 FAM167A-AS1Q96KT0 104 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 ZNF714Q96N38 554 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 JMJD8Q96S16 334 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 SLC25A2Q9BXI2 301 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 FAM234AQ9H0X4 552 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 ZNF71Q9NQZ8 489 aaPredicted RBP8.79□□□□□ -1
UPF3A-212ENST00000619079 EPG5Q9HCE0 2579 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 MED13Q9UHV7 2174 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 A0A1W2PPM0 123 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 VWC2LB2RUY7 222 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 CSN1S1P47710 185 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 RBPMS2Q6ZRY4 209 aaKnown RBP8.79□□□□□ -1
UPF3A-212ENST00000619079 TPRX1Q8N7U7 411 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 OR4X2Q8NGF9 303 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 OR1L4Q8NGR5 311 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 DDB2Q92466 427 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 SPCS1Q9Y6A9 102 aa8.79□□□□□ -1
UPF3A-212ENST00000619079 IGKV1OR2-108A0A075B7D4 117 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 FABP2P12104 132 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 COL8A2P25067 703 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 UQCRFS1P47985 274 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 KIR3DS1Q14943 382 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 C2orf83Q53S99 150 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 Q6ZR03 302 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 FA2HQ7L5A8 372 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 GPR82Q96P67 336 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 SIGMAR1Q99720 223 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms