RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 UHRF2Q96PU4 802 aa13.75□□□□□ -0.21
PCDHGC3-205ENST00000617641 URGCP-MRPS24S4R325 110 aa13.75□□□□□ -0.21
PCDHGC3-205ENST00000617641 TRAV20A0A0B4J274 112 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 A1L4Q6 167 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 I3L2K1 104 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 NDUFS8O00217 210 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 OR10J4P0C629 311 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 CX3CL1P78423 397 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 NDPQ00604 133 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 ZNF124Q15973 351 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 RNF212Q495C1 297 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 C10orf113Q5VZT2 155 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 PQLC2Q6ZP29 291 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 TRGV9Q99603 122 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 TXNDC17Q9BRA2 123 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 MRPL32Q9BYC8 188 aaKnown RBP13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 CENPVL3A0A0U1RRI6 287 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 NPFFO15130 113 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 RAB5AP20339 215 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 OR1L4Q8NGR5 311 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 FAM167A-AS1Q96KT0 104 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 SSX3Q99909 188 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 SLC25A2Q9BXI2 301 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 TMEM167BQ9NRX6 74 aa13.74□□□□□ -0.21
PCDHGC3-205ENST00000617641 EPG5Q9HCE0 2579 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 SPG11Q96JI7 2443 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 FOLR2P14207 255 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 PAX8Q06710 450 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 ZNF562Q6V9R5 426 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 ZFP82Q8N141 532 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 ARPC1AQ92747 370 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 PFDN5Q99471 154 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 UBR5O95071 2799 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 IGHV3OR16-10A0A075B7F0 116 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 FAM106CPP0CH98 169 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 BPIFB3P59826 476 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 FLI1Q01543 452 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 KLF17Q5JT82 389 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 OR5AU1Q8NGC0 362 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 Q8WTZ3 238 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 RNF2Q99496 336 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 ZNF355PQ9NSJ1 428 aa13.73□□□□□ -0.21
PCDHGC3-205ENST00000617641 ORM2P19652 201 aa13.72□□□□□ -0.21
PCDHGC3-205ENST00000617641 RELQ04864 619 aaPredicted RBP13.72□□□□□ -0.21
PCDHGC3-205ENST00000617641 ELOBQ15370 118 aa13.72□□□□□ -0.21
PCDHGC3-205ENST00000617641 ASPHD1Q5U4P2 390 aa13.72□□□□□ -0.21
PCDHGC3-205ENST00000617641 CXorf65A6NEN9 183 aa13.72□□□□□ -0.21
PCDHGC3-205ENST00000617641 K7EIM0 57 aa13.72□□□□□ -0.21
PCDHGC3-205ENST00000617641 COX6B1P14854 86 aa13.72□□□□□ -0.21
PCDHGC3-205ENST00000617641 OR5T1Q8NG75 326 aa13.72□□□□□ -0.21
PCDHGC3-205ENST00000617641 OR1B1Q8NGR6 318 aa13.72□□□□□ -0.21
PCDHGC3-205ENST00000617641 SAV1Q9H4B6 383 aaPredicted RBP13.72□□□□□ -0.21
PCDHGC3-205ENST00000617641 LINC00587B1AMM8 73 aa13.71□□□□□ -0.21
PCDHGC3-205ENST00000617641 Q8N9W7 124 aa13.71□□□□□ -0.21
PCDHGC3-205ENST00000617641 AURKAIP1Q9NWT8 199 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC3-205ENST00000617641 ABCA1O95477 2261 aa13.71□□□□□ -0.22
PCDHGC3-205ENST00000617641 CLDN34H7C241 214 aa13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 CXCL1P09341 107 aa13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 BRS3P32247 399 aa13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 LINC00305Q7Z4B0 112 aa13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 TGIF2-C20orf24A0A0A6YYL0 155 aa13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 PGPEP1LA6NFU8 196 aa13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 IGLC1P0CG04 106 aa13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 PYYP10082 97 aa13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 UBE2L3P68036 154 aaKnown RBP13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 C16orf82Q7Z2V1 217 aa13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 C2CD4CQ8TF44 421 aa13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 TMEM242Q9NWH2 141 aa13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 ARL2-SNX15V9GYD0 113 aa13.7□□□□□ -0.22
PCDHGC3-205ENST00000617641 CELSR2Q9HCU4 2923 aa13.69□□□□□ -0.22
PCDHGC3-205ENST00000617641 TRBV20OR9-2A0A075B6H5 130 aa13.69□□□□□ -0.22
PCDHGC3-205ENST00000617641 CTDSP1Q9GZU7 261 aa13.69□□□□□ -0.22
PCDHGC3-205ENST00000617641 ELOA3CA0A087WX78 387 aaPredicted RBP13.69□□□□□ -0.22
PCDHGC3-205ENST00000617641 IGHV7-81A0A0B4J1V7 117 aa13.69□□□□□ -0.22
PCDHGC3-205ENST00000617641 NPIPB5A8MRT5 1133 aa13.69□□□□□ -0.22
PCDHGC3-205ENST00000617641 C1orf196B1AJZ1 125 aa13.69□□□□□ -0.22
PCDHGC3-205ENST00000617641 TIGITQ495A1 244 aa13.69□□□□□ -0.22
PCDHGC3-205ENST00000617641 LINC01551Q86U37 167 aa13.69□□□□□ -0.22
PCDHGC3-205ENST00000617641 OR1L6Q8NGR2 347 aa13.69□□□□□ -0.22
PCDHGC3-205ENST00000617641 C1RLQ9NZP8 487 aa13.69□□□□□ -0.22
PCDHGC3-205ENST00000617641 S4R3C0 116 aa13.69□□□□□ -0.22
PCDHGC3-205ENST00000617641 FAM208BQ5VWN6 2430 aa13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 TRAV40A0A0B4J280 105 aa13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 GGTLC3B5MD39 225 aa13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 GATCO43716 136 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 EGR2P11161 476 aaPredicted RBP13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 C11orf52Q96A22 123 aa13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 FANCD2OSQ96PS1 177 aa13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 PAXXQ9BUH6 204 aa13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 IGHV1-69DA0A0B4J2H0 117 aa13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 IGHV1-69P01742 117 aa13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 PSG1P11464 419 aa13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 RPL35P42766 123 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 BRD3OSQ6XYD6 125 aa13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 HSPB9Q9BQS6 159 aa13.68□□□□□ -0.22
PCDHGC3-205ENST00000617641 CELSR1Q9NYQ6 3014 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 HYPMO75409 117 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 IGKV1-17P01599 117 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 AKR1D1P51857 326 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms