RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 IGKV1OR2-108A0A075B7D4 117 aa16.42■□□□□ 0.22
CNTNAP3B-212ENST00000617422 TEX22C9J3V5 150 aa16.42■□□□□ 0.22
CNTNAP3B-212ENST00000617422 FAM3BP58499 235 aaPredicted RBP16.42■□□□□ 0.22
CNTNAP3B-212ENST00000617422 GAMTQ14353 236 aa16.42■□□□□ 0.22
CNTNAP3B-212ENST00000617422 HES1Q14469 280 aa16.42■□□□□ 0.22
CNTNAP3B-212ENST00000617422 CLEC12BQ2HXU8 276 aa16.42■□□□□ 0.22
CNTNAP3B-212ENST00000617422 NPBQ8NG41 125 aa16.42■□□□□ 0.22
CNTNAP3B-212ENST00000617422 GGTLC1Q9BX51 225 aa16.42■□□□□ 0.22
CNTNAP3B-212ENST00000617422 IGHV3OR16-10A0A075B7F0 116 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 NBR2O15453 112 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 MFAP2P55001 183 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 FAM120AOSQ5T036 256 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 Q8N6K4 173 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 OR1P1Q8NH06 330 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 OR4F5Q8NH21 305 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 ACY3Q96HD9 319 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 OR4F4Q96R69 305 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 NPVFQ9HCQ7 196 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 TBL2Q9Y4P3 447 aaKnown RBP16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 ABCA1O95477 2261 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 OOSP1A8MZH6 123 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 SOX15O60248 233 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 NDUFA3O95167 84 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 RUSC1-AS1Q66K80 236 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 CCDC144NLQ6NUI1 221 aa16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 FNDC4Q9H6D8 234 aaPredicted RBP16.41■□□□□ 0.22
CNTNAP3B-212ENST00000617422 A0A096LNT2 108 aa16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 ACTL6BO94805 426 aa16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 SRP14P37108 136 aaKnown RBP16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 HIST2H2BCQ6DN03 193 aa16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 RAB24Q969Q5 203 aa16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 NAV2Q8IVL1 2488 aa16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 NPFFO15130 113 aa16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 HMGB3O15347 200 aaKnown RBP16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 ATP5IP56385 69 aaPredicted RBP16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 EBI3Q14213 229 aa16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 JOSD1Q15040 202 aaPredicted RBP16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 PLGLAQ15195 96 aa16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 ACOT6Q3I5F7 207 aaPredicted RBP16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 MIC13Q5XKP0 118 aa16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 SSMEM1Q8WWF3 244 aa16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 SRSF12Q8WXF0 261 aaKnown RBP16.4■□□□□ 0.22
CNTNAP3B-212ENST00000617422 MPDU1O75352 247 aa16.39■□□□□ 0.21
CNTNAP3B-212ENST00000617422 IGHV3-48P01763 117 aa16.39■□□□□ 0.21
CNTNAP3B-212ENST00000617422 CD69Q07108 199 aa16.39■□□□□ 0.21
CNTNAP3B-212ENST00000617422 OR2T10Q8NGZ9 312 aa16.39■□□□□ 0.21
CNTNAP3B-212ENST00000617422 MRPL36Q9P0J6 103 aaKnown RBP16.39■□□□□ 0.21
CNTNAP3B-212ENST00000617422 TMEM249Q2WGJ8 235 aa16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 TEPPQ6URK8 271 aa16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 ZNF600Q6ZNG1 722 aa16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 REC114Q7Z4M0 266 aa16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 NECAP1Q8NC96 275 aa16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 OR2T6Q8NHC8 308 aa16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 C14orf144Q96I85 54 aa16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 GGCTO75223 188 aaKnown RBP16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 TYMSP04818 313 aa16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 MSMBP08118 114 aa16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 DDTP30046 118 aa16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 DSCR9P59020 149 aa16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 BTF3L4Q96K17 158 aa16.38■□□□□ 0.21
CNTNAP3B-212ENST00000617422 FNDC10F2Z333 226 aa16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 OPRK1P41145 380 aa16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 C5orf64Q2M2E5 130 aa16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 KCNIP4Q6PIL6 250 aa16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 PXMP4Q9Y6I8 212 aa16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 XKRY2A2RUG3 117 aa16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 J3QKU1 62 aa16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 PAGE4O60829 102 aa16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 AMBPP02760 352 aa16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 CDC34P49427 236 aaPredicted RBP16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 PVRIGQ6DKI7 326 aa16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 BRD3OSQ6XYD6 125 aa16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 SOX21Q9Y651 276 aaPredicted RBP16.37■□□□□ 0.21
CNTNAP3B-212ENST00000617422 TRAV40A0A0B4J280 105 aa16.36■□□□□ 0.21
CNTNAP3B-212ENST00000617422 PDE6DO43924 150 aa16.36■□□□□ 0.21
CNTNAP3B-212ENST00000617422 IGHV4-38-2P0DP08 117 aa16.36■□□□□ 0.21
CNTNAP3B-212ENST00000617422 CD99P14209 185 aa16.36■□□□□ 0.21
CNTNAP3B-212ENST00000617422 TMEM144Q7Z5S9 345 aa16.36■□□□□ 0.21
CNTNAP3B-212ENST00000617422 MAPK1IP1LQ8NDC0 245 aa16.36■□□□□ 0.21
CNTNAP3B-212ENST00000617422 GATAD1Q8WUU5 269 aa16.36■□□□□ 0.21
CNTNAP3B-212ENST00000617422 FAM103A1Q9BTL3 118 aaKnown RBP16.36■□□□□ 0.21
CNTNAP3B-212ENST00000617422 ACTL10Q5JWF8 245 aa16.36■□□□□ 0.21
CNTNAP3B-212ENST00000617422 ZNF114Q8NC26 417 aa16.36■□□□□ 0.21
CNTNAP3B-212ENST00000617422 A0A1W2PPQ1 181 aa16.35■□□□□ 0.21
CNTNAP3B-212ENST00000617422 C11orf94C9JXX5 98 aa16.35■□□□□ 0.21
CNTNAP3B-212ENST00000617422 AVPP01185 164 aa16.35■□□□□ 0.21
CNTNAP3B-212ENST00000617422 STPG3Q8N7X2 389 aa16.35■□□□□ 0.21
CNTNAP3B-212ENST00000617422 IGHV1-69DA0A0B4J2H0 117 aa16.34■□□□□ 0.21
CNTNAP3B-212ENST00000617422 NCBP2LA6PVI3 153 aaKnown RBP16.34■□□□□ 0.21
CNTNAP3B-212ENST00000617422 GCGP01275 180 aa16.34■□□□□ 0.21
CNTNAP3B-212ENST00000617422 IGHV1-69P01742 117 aa16.34■□□□□ 0.21
CNTNAP3B-212ENST00000617422 LINC00869P0C866 280 aa16.34■□□□□ 0.21
CNTNAP3B-212ENST00000617422 SLC25A16P16260 332 aa16.34■□□□□ 0.21
CNTNAP3B-212ENST00000617422 TMEM11P17152 192 aa16.34■□□□□ 0.21
CNTNAP3B-212ENST00000617422 GATA2P23769 480 aaPredicted RBP16.34■□□□□ 0.21
CNTNAP3B-212ENST00000617422 NDPQ00604 133 aa16.34■□□□□ 0.21
CNTNAP3B-212ENST00000617422 ZNF469Q96JG9 3925 aaPredicted RBP16.34■□□□□ 0.21
CNTNAP3B-212ENST00000617422 CNIH1O95406 144 aa16.34■□□□□ 0.21
CNTNAP3B-212ENST00000617422 PRR20EP86478 221 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms