RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 WNK1Q9H4A3 2382 aa11.98□□□□□ -0.49
PCDHGC3-204ENST00000617222 FXYD6-FXYD2A0A087WZ82 144 aa11.97□□□□□ -0.49
PCDHGC3-204ENST00000617222 SCAF4O95104 1147 aaKnown RBP11.97□□□□□ -0.49
PCDHGC3-204ENST00000617222 IGLC1P0CG04 106 aa11.97□□□□□ -0.49
PCDHGC3-204ENST00000617222 SYNJ2BPP57105 145 aa11.97□□□□□ -0.49
PCDHGC3-204ENST00000617222 HBG1P69891 147 aa11.97□□□□□ -0.49
PCDHGC3-204ENST00000617222 HBG2P69892 147 aa11.97□□□□□ -0.49
PCDHGC3-204ENST00000617222 AKR1C1Q04828 323 aa11.97□□□□□ -0.49
PCDHGC3-204ENST00000617222 KLF5Q13887 457 aaPredicted RBP11.97□□□□□ -0.49
PCDHGC3-204ENST00000617222 OR1S2Q8NGQ3 325 aa11.97□□□□□ -0.49
PCDHGC3-204ENST00000617222 GGACTQ9BVM4 153 aa11.97□□□□□ -0.49
PCDHGC3-204ENST00000617222 ZFP92A6NM28 416 aa11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 SCGB2A1O75556 95 aa11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 IGKV1-17P01599 117 aa11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 NUP62P37198 522 aaPredicted RBP11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 RELQ04864 619 aaPredicted RBP11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 BAXQ07812 192 aa11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 FAM106AQ4KMX7 169 aa11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 TMEM144Q7Z5S9 345 aa11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 ZNF546Q86UE3 836 aa11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 GPHB5Q86YW7 130 aa11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 LILRB2Q8N423 598 aa11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 NPVFQ9HCQ7 196 aa11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 HSPB11Q9Y547 144 aa11.96□□□□□ -0.49
PCDHGC3-204ENST00000617222 IGKV1D-37A0A075B6S9 117 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 IGKV1OR2-108A0A075B7D4 117 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 ZNF320A2RRD8 509 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 FNDC10F2Z333 226 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 OVOL1O14753 267 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 CLINT1Q14677 625 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 ATP6V1FQ16864 119 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 AKAP14Q86UN6 197 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 C1QL4Q86Z23 238 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 THAP8Q8NA92 274 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 OR5C1Q8NGR4 320 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 ZNF414Q96IQ9 312 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 TMEM147Q9BVK8 224 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 SMIM3Q9BZL3 60 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 UQCC1Q9NVA1 299 aa11.95□□□□□ -0.5
PCDHGC3-204ENST00000617222 YIF1AO95070 293 aa11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 CD33P20138 364 aa11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 YPEL3P61236 119 aaPredicted RBP11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 ZNF90Q03938 601 aa11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 TREML4Q6UXN2 200 aa11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 UNQ9165/PRO28630Q6UXU0 137 aa11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 ZNF600Q6ZNG1 722 aa11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 TCTE3Q8IZS6 198 aa11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 INO80EQ8NBZ0 244 aaPredicted RBP11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 WFDC9Q8NEX5 89 aa11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 AQP10Q96PS8 301 aa11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 TRGV9Q99603 122 aa11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 TNFSF18Q9UNG2 199 aa11.94□□□□□ -0.5
PCDHGC3-204ENST00000617222 IGHV3OR16-8A0A075B7F1 116 aa11.93□□□□□ -0.5
PCDHGC3-204ENST00000617222 NDUFA4O00483 81 aa11.93□□□□□ -0.5
PCDHGC3-204ENST00000617222 RD3LP0DJH9 198 aa11.93□□□□□ -0.5
PCDHGC3-204ENST00000617222 VWC2Q2TAL6 325 aa11.93□□□□□ -0.5
PCDHGC3-204ENST00000617222 PRR31Q5SQ13 230 aa11.93□□□□□ -0.5
PCDHGC3-204ENST00000617222 TOMM20LQ6UXN7 152 aa11.93□□□□□ -0.5
PCDHGC3-204ENST00000617222 REC114Q7Z4M0 266 aa11.93□□□□□ -0.5
PCDHGC3-204ENST00000617222 OR11H4Q8NGC9 324 aa11.93□□□□□ -0.5
PCDHGC3-204ENST00000617222 Q8WTZ3 238 aa11.93□□□□□ -0.5
PCDHGC3-204ENST00000617222 RCC1LQ96I51 464 aaKnown RBP11.93□□□□□ -0.5
PCDHGC3-204ENST00000617222 C20orf24Q9BUV8 137 aa11.93□□□□□ -0.5
PCDHGC3-204ENST00000617222 PUS1Q9Y606 427 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCDHGC3-204ENST00000617222 LGALS9O00182 355 aa11.92□□□□□ -0.5
PCDHGC3-204ENST00000617222 ARPC5O15511 151 aa11.92□□□□□ -0.5
PCDHGC3-204ENST00000617222 PSG1P11464 419 aa11.92□□□□□ -0.5
PCDHGC3-204ENST00000617222 AP2S1P53680 142 aaPredicted RBP11.92□□□□□ -0.5
PCDHGC3-204ENST00000617222 CD300CQ08708 224 aa11.92□□□□□ -0.5
PCDHGC3-204ENST00000617222 OR2F1Q13607 317 aa11.92□□□□□ -0.5
PCDHGC3-204ENST00000617222 TM4SF20Q53R12 229 aa11.92□□□□□ -0.5
PCDHGC3-204ENST00000617222 TEPPQ6URK8 271 aa11.92□□□□□ -0.5
PCDHGC3-204ENST00000617222 OR9G4Q8NGQ1 327 aa11.92□□□□□ -0.5
PCDHGC3-204ENST00000617222 TMEM190Q8WZ59 177 aa11.92□□□□□ -0.5
PCDHGC3-204ENST00000617222 UBE2L5PA0A1B0GUS4 154 aa11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 RNF222A6NCQ9 220 aa11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 ZNF207O43670 478 aaKnown RBP11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 TOMM40O96008 361 aa11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 FABP1P07148 127 aa11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 GATA2P23769 480 aaPredicted RBP11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 TMEM182Q6ZP80 229 aaPredicted RBP11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 CYP2G1PQ6ZSU1 146 aa11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 ATP5SQ99766 215 aa11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 MFFQ9GZY8 342 aa11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 WFDC1Q9HC57 220 aa11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 PEMTQ9UBM1 199 aa11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 WDR83OSQ9Y284 106 aa11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 UFC1Q9Y3C8 167 aa11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 LSM4Q9Y4Z0 139 aaKnown RBP11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 ANK2Q01484 3957 aa11.91□□□□□ -0.5
PCDHGC3-204ENST00000617222 HMSDA8MTL9 139 aa11.9□□□□□ -0.5
PCDHGC3-204ENST00000617222 DFFBO76075 338 aa11.9□□□□□ -0.5
PCDHGC3-204ENST00000617222 BTNL8Q6UX41 500 aa11.9□□□□□ -0.5
PCDHGC3-204ENST00000617222 MGST2Q99735 147 aa11.9□□□□□ -0.5
PCDHGC3-204ENST00000617222 ELOVL1Q9BW60 279 aa11.9□□□□□ -0.5
PCDHGC3-204ENST00000617222 FBXL17Q9UF56 701 aa11.9□□□□□ -0.5
PCDHGC3-204ENST00000617222 TMEM213A2RRL7 107 aa11.89□□□□□ -0.51
PCDHGC3-204ENST00000617222 SEC14L6B5MCN3 397 aa11.89□□□□□ -0.51
PCDHGC3-204ENST00000617222 K7EMT4 169 aa11.89□□□□□ -0.51
PCDHGC3-204ENST00000617222 AGPAT2O15120 278 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms