RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 SSMEM1Q8WWF3 244 aa6.24□□□□□ -1.41
MALAT1-208ENST00000616527 C11orf52Q96A22 123 aa6.24□□□□□ -1.41
MALAT1-208ENST00000616527 TMEM68Q96MH6 324 aa6.24□□□□□ -1.41
MALAT1-208ENST00000616527 ZNF48Q96MX3 618 aaPredicted RBP6.24□□□□□ -1.41
MALAT1-208ENST00000616527 YPEL4Q96NS1 127 aa6.24□□□□□ -1.41
MALAT1-208ENST00000616527 TCEAL7Q9BRU2 100 aa6.24□□□□□ -1.41
MALAT1-208ENST00000616527 SLC25A33Q9BSK2 321 aa6.24□□□□□ -1.41
MALAT1-208ENST00000616527 FBXL15Q9H469 300 aa6.24□□□□□ -1.41
MALAT1-208ENST00000616527 DNAJC4Q9NNZ3 241 aa6.24□□□□□ -1.41
MALAT1-208ENST00000616527 PUS1Q9Y606 427 aaKnown RBP eCLIP6.24□□□□□ -1.41
MALAT1-208ENST00000616527 LY96Q9Y6Y9 160 aa6.24□□□□□ -1.41
MALAT1-208ENST00000616527 TET2Q6N021 2002 aaPredicted RBP6.24□□□□□ -1.41
MALAT1-208ENST00000616527 IGKV1D-37A0A075B6S9 117 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 LOC105371267A0A1B0GV96 52 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 A0A1W2PRE2 83 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 ZNF727A8MUV8 499 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 C11orf94C9JXX5 98 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 PAGE4O60829 102 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 FABP1P07148 127 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 FAM106CPP0CH98 169 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 ARL14EPLP0DKL9 152 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 C8orf88P0DMB2 117 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 CD99P14209 185 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 GATA3P23771 443 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 CNTFRP26992 372 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 RND2P52198 227 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 MFAP2P55001 183 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 BPIFB3P59826 476 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 FLI1Q01543 452 aaPredicted RBP6.23□□□□□ -1.41
MALAT1-208ENST00000616527 TMEM241Q24JQ0 296 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 C19orf54Q5BKX5 351 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 GCSAMLQ5JQS6 135 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 TMEM88Q6PEY1 159 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 CLEC2AQ6UVW9 174 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 LHFPL4Q7Z7J7 247 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 STXBP6Q8NFX7 210 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 OR4X1Q8NH49 305 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 C17orf50Q8WW18 174 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 NPIPB3Q92617 1050 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 RPUSD4Q96CM3 377 aaKnown RBP6.23□□□□□ -1.41
MALAT1-208ENST00000616527 AJUBAQ96IF1 538 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 TMPRSS5Q9H3S3 457 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 SEPSECSQ9HD40 501 aaKnown RBP6.23□□□□□ -1.41
MALAT1-208ENST00000616527 NBEAQ8NFP9 2946 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 SPTAN1Q13813 2472 aaKnown RBP6.23□□□□□ -1.41
MALAT1-208ENST00000616527 CFAP46Q8IYW2 2715 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 IGSF10Q6WRI0 2623 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 USP24Q9UPU5 2620 aa6.23□□□□□ -1.41
MALAT1-208ENST00000616527 TRAV30A0A087WSZ9 112 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 I3L2K1 104 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 FCN1O00602 326 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 NUPL2O15504 423 aaKnown RBP6.22□□□□□ -1.41
MALAT1-208ENST00000616527 TGOLN2O43493 480 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 HLA-DRB1P01911 266 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 AMY1AP04745 511 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 SLC25A16P16260 332 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 FCGR2BP31994 310 aaPredicted RBP6.22□□□□□ -1.41
MALAT1-208ENST00000616527 DLX1P56177 255 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 LCN2P80188 198 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 KLRD1Q13241 179 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 FXYD3Q14802 87 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 PLGLAQ15195 96 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 FAM78BQ5VT40 261 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 TTC9CQ8N5M4 171 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.22□□□□□ -1.41
MALAT1-208ENST00000616527 OR4F5Q8NH21 305 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 OR2T6Q8NHC8 308 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 TMEM37Q8WXS4 190 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 HIST1H2BAQ96A08 127 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 FAM167A-AS1Q96KT0 104 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 BBC3Q96PG8 261 aaPredicted RBP6.22□□□□□ -1.41
MALAT1-208ENST00000616527 OR4F4Q96R69 305 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 SMIM7Q9BQ49 75 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 MEGF9Q9H1U4 602 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 PARLQ9H300 379 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 TNFRSF19Q9NS68 423 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 HILPDAQ9Y5L2 63 aa6.22□□□□□ -1.41
MALAT1-208ENST00000616527 C9JCJ5 164 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 CLDN34H7C241 214 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 NPFFO15130 113 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 KALRNO60229 2985 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 OR2C1O95371 312 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 CNIH1O95406 144 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 HIST1H1BP16401 226 aaKnown RBP6.21□□□□□ -1.42
MALAT1-208ENST00000616527 ATP5J2P56134 94 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 CX3CL1P78423 397 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 S100A7AQ86SG5 101 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 DYNAPQ8N1N2 210 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 ACY3Q96HD9 319 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 C8orf49Q96NF6 230 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 UHRF2Q96PU4 802 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 ATP6V0BQ99437 205 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
MALAT1-208ENST00000616527 IGLV11-55A0A075B6I3 123 aa6.2□□□□□ -1.42
MALAT1-208ENST00000616527 TRBV24-1A0A075B6N3 115 aa6.2□□□□□ -1.42
MALAT1-208ENST00000616527 IGHV4-61A0A0C4DH41 118 aa6.2□□□□□ -1.42
MALAT1-208ENST00000616527 CENPVL3A0A0U1RRI6 287 aa6.2□□□□□ -1.42
MALAT1-208ENST00000616527 A0A1W2PRD5 423 aa6.2□□□□□ -1.42
MALAT1-208ENST00000616527 A0A1W2PRF3 423 aa6.2□□□□□ -1.42
MALAT1-208ENST00000616527 A0A1W2PRM7 423 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms