RNA–Protein interactions for RNA: ENST00000616271.4

CADM1-222, Transcript of cell adhesion molecule 1, human

TSL 5 BASIC

Gene CADM1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CADM1-222	ENST00000616271	RAB40C	Q96S21	281 aa		13.91	□□□□□ -0.18
CADM1-222	ENST00000616271	GINS3	Q9BRX5	216 aa		13.91	□□□□□ -0.18
CADM1-222	ENST00000616271	PSENEN	Q9NZ42	101 aa		13.91	□□□□□ -0.18
CADM1-222	ENST00000616271	MLX	Q9UH92	298 aa		13.91	□□□□□ -0.18
CADM1-222	ENST00000616271	RCL1	Q9Y2P8	373 aa	Known RBP	13.91	□□□□□ -0.18
CADM1-222	ENST00000616271	IGHV3OR16-8	A0A075B7F1	116 aa		13.9	□□□□□ -0.18
CADM1-222	ENST00000616271	IGKV1-17	P01599	117 aa		13.9	□□□□□ -0.18
CADM1-222	ENST00000616271	MBP	P02686	304 aa	Predicted RBP	13.9	□□□□□ -0.18
CADM1-222	ENST00000616271	OR10J1	P30954	320 aa		13.9	□□□□□ -0.18
CADM1-222	ENST00000616271	TAS2R30	P59541	319 aa		13.9	□□□□□ -0.18
CADM1-222	ENST00000616271	TOMM20L	Q6UXN7	152 aa		13.9	□□□□□ -0.18
CADM1-222	ENST00000616271	NPIPB3	Q92617	1050 aa		13.9	□□□□□ -0.18
CADM1-222	ENST00000616271	ACY3	Q96HD9	319 aa		13.9	□□□□□ -0.18
CADM1-222	ENST00000616271	ZFAND3	Q9H8U3	227 aa		13.9	□□□□□ -0.18
CADM1-222	ENST00000616271	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
CADM1-222	ENST00000616271	IZUMO1R	A6ND01	250 aa		13.89	□□□□□ -0.19
CADM1-222	ENST00000616271	PRSS46	E5RG02	174 aa		13.89	□□□□□ -0.19
CADM1-222	ENST00000616271	PAX9	P55771	341 aa		13.89	□□□□□ -0.19
CADM1-222	ENST00000616271	YPEL3	P61236	119 aa	Predicted RBP	13.89	□□□□□ -0.19
CADM1-222	ENST00000616271	TIGIT	Q495A1	244 aa		13.89	□□□□□ -0.19
CADM1-222	ENST00000616271	BTNL8	Q6UX41	500 aa		13.89	□□□□□ -0.19
CADM1-222	ENST00000616271	ZNF207	O43670	478 aa	Known RBP	13.88	□□□□□ -0.19
CADM1-222	ENST00000616271	TSC22D2	O75157	780 aa		13.88	□□□□□ -0.19
CADM1-222	ENST00000616271	GAMT	Q14353	236 aa		13.88	□□□□□ -0.19
CADM1-222	ENST00000616271	LSM4	Q9Y4Z0	139 aa	Known RBP	13.88	□□□□□ -0.19
CADM1-222	ENST00000616271	TRAV25	A0A0B4J276	109 aa		13.87	□□□□□ -0.19
CADM1-222	ENST00000616271	IGHV7-4-1	A0A0J9YVY3	117 aa		13.87	□□□□□ -0.19
CADM1-222	ENST00000616271	C7orf66	A4D0T2	115 aa		13.87	□□□□□ -0.19
CADM1-222	ENST00000616271		K7EPK0	472 aa		13.87	□□□□□ -0.19
CADM1-222	ENST00000616271	GOSR2	O14653	212 aa		13.87	□□□□□ -0.19
CADM1-222	ENST00000616271	IL15RA	Q13261	267 aa		13.87	□□□□□ -0.19
CADM1-222	ENST00000616271	DEFB121	Q5J5C9	76 aa		13.87	□□□□□ -0.19
CADM1-222	ENST00000616271	TMEM14EP	Q6UXP3	125 aa		13.87	□□□□□ -0.19
CADM1-222	ENST00000616271	TMEM61	Q8N0U2	210 aa		13.87	□□□□□ -0.19
CADM1-222	ENST00000616271	SMPX	Q9UHP9	88 aa		13.87	□□□□□ -0.19
CADM1-222	ENST00000616271	LSM5	Q9Y4Y9	91 aa	Known RBP	13.87	□□□□□ -0.19
CADM1-222	ENST00000616271	TRAV14DV4	A0A0A6YYC5	116 aa		13.86	□□□□□ -0.19
CADM1-222	ENST00000616271		L7N2F9	121 aa		13.86	□□□□□ -0.19
CADM1-222	ENST00000616271	SCAF4	O95104	1147 aa	Known RBP	13.86	□□□□□ -0.19
CADM1-222	ENST00000616271	TOMM40	O96008	361 aa		13.86	□□□□□ -0.19
CADM1-222	ENST00000616271	BMI1	P35226	326 aa		13.86	□□□□□ -0.19
CADM1-222	ENST00000616271	VAMP2	P63027	116 aa		13.86	□□□□□ -0.19
CADM1-222	ENST00000616271		Q8WTZ3	238 aa		13.86	□□□□□ -0.19
CADM1-222	ENST00000616271	ZFP92	A6NM28	416 aa		13.85	□□□□□ -0.19
CADM1-222	ENST00000616271	ZNF785	A8K8V0	405 aa		13.85	□□□□□ -0.19
CADM1-222	ENST00000616271	PMS2P5	A8MQ11	134 aa		13.85	□□□□□ -0.19
CADM1-222	ENST00000616271	SSNA1	O43805	119 aa		13.85	□□□□□ -0.19
CADM1-222	ENST00000616271	ACOT7L	Q6ZUV0	252 aa		13.85	□□□□□ -0.19
CADM1-222	ENST00000616271	GTSCR1	Q86UQ5	136 aa		13.85	□□□□□ -0.19
CADM1-222	ENST00000616271	WDR89	Q96FK6	387 aa	Predicted RBP	13.85	□□□□□ -0.19
CADM1-222	ENST00000616271	RHPN1-AS1	Q9BWJ2	59 aa		13.85	□□□□□ -0.19
CADM1-222	ENST00000616271	C11orf1	Q9H5F2	150 aa		13.85	□□□□□ -0.19
CADM1-222	ENST00000616271	SMAD5-AS1	Q9Y6J3	95 aa		13.85	□□□□□ -0.19
CADM1-222	ENST00000616271	IGKV1D-37	A0A075B6S9	117 aa		13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	CHEK1	O14757	476 aa		13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	METTL15P1	P0C7V9	234 aa		13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	PVALB	P20472	110 aa	Predicted RBP	13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	S100A10	P60903	97 aa		13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	RAB32	Q13637	225 aa		13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	GUCA2B	Q16661	112 aa		13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	LAMTOR1	Q6IAA8	161 aa		13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	OR8G2P	Q6IF36	304 aa		13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	THAP8	Q8NA92	274 aa		13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	METTL26	Q96S19	204 aa		13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	NMES1	Q9C002	83 aa		13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	SELENOK	Q9Y6D0	94 aa		13.84	□□□□□ -0.19
CADM1-222	ENST00000616271	PRKDC	P78527	4128 aa	Known RBP	13.83	□□□□□ -0.19
CADM1-222	ENST00000616271	SIX6	O95475	246 aa		13.83	□□□□□ -0.2
CADM1-222	ENST00000616271	FABP1	P07148	127 aa		13.83	□□□□□ -0.2
CADM1-222	ENST00000616271	RD3L	P0DJH9	198 aa		13.83	□□□□□ -0.2
CADM1-222	ENST00000616271	DLK1	P80370	383 aa		13.83	□□□□□ -0.2
CADM1-222	ENST00000616271	CYCS	P99999	105 aa	Known RBP	13.83	□□□□□ -0.2
CADM1-222	ENST00000616271		Q8N1Y9	231 aa		13.83	□□□□□ -0.2
CADM1-222	ENST00000616271	OR10P1	Q8NGE3	313 aa		13.83	□□□□□ -0.2
CADM1-222	ENST00000616271	TRGV9	Q99603	122 aa		13.83	□□□□□ -0.2
CADM1-222	ENST00000616271	TMEM231	Q9H6L2	316 aa		13.83	□□□□□ -0.2
CADM1-222	ENST00000616271	VSIR	Q9H7M9	311 aa		13.83	□□□□□ -0.2
CADM1-222	ENST00000616271	IGHV3-49	A0A0A0MS15	119 aa		13.82	□□□□□ -0.2
CADM1-222	ENST00000616271	FNDC10	F2Z333	226 aa		13.82	□□□□□ -0.2
CADM1-222	ENST00000616271	TSPAN4	O14817	238 aa		13.82	□□□□□ -0.2
CADM1-222	ENST00000616271	CCNK	O75909	580 aa		13.82	□□□□□ -0.2
CADM1-222	ENST00000616271	IL4	P05112	153 aa		13.82	□□□□□ -0.2
CADM1-222	ENST00000616271	PSG1	P11464	419 aa		13.82	□□□□□ -0.2
CADM1-222	ENST00000616271	NPPC	P23582	126 aa		13.82	□□□□□ -0.2
CADM1-222	ENST00000616271	CRYBB3	P26998	211 aa		13.82	□□□□□ -0.2
CADM1-222	ENST00000616271	AKR1C1	Q04828	323 aa		13.82	□□□□□ -0.2
CADM1-222	ENST00000616271	OR51G1	Q8NGK1	321 aa		13.82	□□□□□ -0.2
CADM1-222	ENST00000616271	SPAG8	Q99932	426 aa	Predicted RBP	13.82	□□□□□ -0.2
CADM1-222	ENST00000616271	ALG5	Q9Y673	324 aa		13.82	□□□□□ -0.2
CADM1-222	ENST00000616271	IGKV1OR2-108	A0A075B7D4	117 aa		13.81	□□□□□ -0.2
CADM1-222	ENST00000616271		A0A1W2PS18	150 aa		13.81	□□□□□ -0.2
CADM1-222	ENST00000616271	CD5	P06127	495 aa		13.81	□□□□□ -0.2
CADM1-222	ENST00000616271	BCAP31	P51572	246 aa		13.81	□□□□□ -0.2
CADM1-222	ENST00000616271	CD81	P60033	236 aa		13.81	□□□□□ -0.2
CADM1-222	ENST00000616271	RGS21	Q2M5E4	152 aa		13.81	□□□□□ -0.2
CADM1-222	ENST00000616271	TMEM144	Q7Z5S9	345 aa		13.81	□□□□□ -0.2
CADM1-222	ENST00000616271	ST8SIA2	Q92186	375 aa		13.81	□□□□□ -0.2
CADM1-222	ENST00000616271	NARS2	Q96I59	477 aa	Known RBP	13.81	□□□□□ -0.2
CADM1-222	ENST00000616271	RNF2	Q99496	336 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms