RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 FGFBP3Q8TAT2 258 aa15.65■□□□□ 0.1
SPAST-203ENST00000615843 PRR31Q5SQ13 230 aa15.65■□□□□ 0.1
SPAST-203ENST00000615843 ASCL2Q99929 193 aa15.65■□□□□ 0.1
SPAST-203ENST00000615843 GREB1Q4ZG55 1949 aa15.65■□□□□ 0.1
SPAST-203ENST00000615843 CKS1BP61024 79 aa15.65■□□□□ 0.1
SPAST-203ENST00000615843 SLC25A48Q6ZT89 311 aaKnown RBP15.65■□□□□ 0.1
SPAST-203ENST00000615843 MPDZO75970 2070 aa15.64■□□□□ 0.1
SPAST-203ENST00000615843 IGLV3-12A0A075B6K2 115 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 IGKV3-20P01619 116 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 IGHV4-39P01824 125 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 IGHV1-2P23083 117 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 C1orf162Q8NEQ5 155 aaPredicted RBP15.64■□□□□ 0.09
SPAST-203ENST00000615843 JMJD8Q96S16 334 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 PSME4Q14997 1843 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 ZNF815PA8K554 130 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 SYS1-DBNDD2H3BUS1 97 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 FOXH1O75593 365 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 RRN3P1Q2M238 152 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 RAX2Q96IS3 184 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 DMRTA2Q96SC8 542 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 GTSF1LQ9H1H1 148 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 EFNA2O43921 213 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 FAM71F2Q6NXP2 309 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 NABP1Q96AH0 204 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 DPM3Q9P2X0 92 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 LOC285556D6RIA3 1793 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 MAJINQ3KP22 176 aa15.64■□□□□ 0.09
SPAST-203ENST00000615843 SMPXQ9UHP9 88 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 EVI2AP22794 236 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 RNF125Q96EQ8 232 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 TNFRSF18Q9Y5U5 241 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 LCTP09848 1927 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 APC2O95996 2303 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 ESPL1Q14674 2120 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 PVRIGQ6DKI7 326 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 MRPS18CQ9Y3D5 142 aaKnown RBP15.63■□□□□ 0.09
SPAST-203ENST00000615843 CHTOPQ9Y3Y2 248 aaKnown RBP15.63■□□□□ 0.09
SPAST-203ENST00000615843 CD5LO43866 347 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 IGKV1D-33P01593 117 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 IGKV1-33P01594 117 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 SNRPD3P62318 126 aaKnown RBP15.63■□□□□ 0.09
SPAST-203ENST00000615843 NUP35Q8NFH5 326 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 VWCEQ96DN2 955 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 SPTA1P02549 2419 aa15.63■□□□□ 0.09
SPAST-203ENST00000615843 IGKV3OR2-268A0A0C4DH90 116 aa15.62■□□□□ 0.09
SPAST-203ENST00000615843 PFN1P07737 140 aaKnown RBP15.62■□□□□ 0.09
SPAST-203ENST00000615843 C5orf63A6NC05 138 aa15.62■□□□□ 0.09
SPAST-203ENST00000615843 RNF115Q9Y4L5 304 aa15.62■□□□□ 0.09
SPAST-203ENST00000615843 ZNF318Q5VUA4 2279 aa15.62■□□□□ 0.09
SPAST-203ENST00000615843 MRPL14Q6P1L8 145 aaKnown RBP15.62■□□□□ 0.09
SPAST-203ENST00000615843 KLHDC3Q9BQ90 382 aa15.62■□□□□ 0.09
SPAST-203ENST00000615843 TRAV8-4A0A0B4J246 113 aa15.62■□□□□ 0.09
SPAST-203ENST00000615843 CCL3L1P16619 93 aa15.62■□□□□ 0.09
SPAST-203ENST00000615843 FOXF2Q12947 444 aa15.62■□□□□ 0.09
SPAST-203ENST00000615843 ZIC4Q8N9L1 334 aa15.62■□□□□ 0.09
SPAST-203ENST00000615843 PNRC2Q9NPJ4 139 aaKnown RBP15.62■□□□□ 0.09
SPAST-203ENST00000615843 C5orf24Q7Z6I8 188 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 GTSCR1Q86UQ5 136 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 PRR7Q8TB68 274 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 BRCA1P38398 1863 aaKnown RBP15.61■□□□□ 0.09
SPAST-203ENST00000615843 E9PQ18 207 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 CDKN1AP38936 164 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 ORMDL2Q53FV1 153 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 ARPC1AQ92747 370 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 H3BRM9 83 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 CFPP27918 469 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 KIR3DS1Q14943 382 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 NPSP0C0P6 89 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 GAGE2BQ13066 116 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 GAGE2EQ4V326 116 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 GAGE2DQ9UEU5 116 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 ZFAND6Q6FIF0 208 aa15.61■□□□□ 0.09
SPAST-203ENST00000615843 PLXNA1Q9UIW2 1896 aa15.6■□□□□ 0.09
SPAST-203ENST00000615843 OR10W1Q8NGF6 305 aa15.6■□□□□ 0.09
SPAST-203ENST00000615843 A0A0G2JRQ6 117 aa15.6■□□□□ 0.09
SPAST-203ENST00000615843 A0A1B0GUS0 222 aa15.6■□□□□ 0.09
SPAST-203ENST00000615843 D6R8Y8 96 aa15.6■□□□□ 0.09
SPAST-203ENST00000615843 PPIFP30405 207 aaKnown RBP15.6■□□□□ 0.09
SPAST-203ENST00000615843 LHX2P50458 406 aa15.6■□□□□ 0.09
SPAST-203ENST00000615843 Q0VG73 95 aa15.6■□□□□ 0.09
SPAST-203ENST00000615843 KIR3DL3Q8N743 410 aa15.6■□□□□ 0.09
SPAST-203ENST00000615843 TRGV3P03979 118 aa15.6■□□□□ 0.09
SPAST-203ENST00000615843 DOCK3Q8IZD9 2030 aa15.6■□□□□ 0.09
SPAST-203ENST00000615843 C8orf46Q8TAG6 207 aa15.6■□□□□ 0.09
SPAST-203ENST00000615843 SDK2Q58EX2 2172 aa15.59■□□□□ 0.09
SPAST-203ENST00000615843 B9A039 149 aa15.59■□□□□ 0.09
SPAST-203ENST00000615843 LINC01559Q495D7 138 aa15.59■□□□□ 0.09
SPAST-203ENST00000615843 ZNF581Q9P0T4 197 aa15.59■□□□□ 0.09
SPAST-203ENST00000615843 PAX2Q02962 417 aa15.59■□□□□ 0.09
SPAST-203ENST00000615843 EPOPA6NHQ4 379 aa15.59■□□□□ 0.09
SPAST-203ENST00000615843 LY6EQ16553 131 aa15.59■□□□□ 0.09
SPAST-203ENST00000615843 RPRMLQ8N4K4 120 aa15.59■□□□□ 0.09
SPAST-203ENST00000615843 OCIAD2Q56VL3 154 aa15.59■□□□□ 0.09
SPAST-203ENST00000615843 TRAV2A0A0B4J234 112 aa15.58■□□□□ 0.09
SPAST-203ENST00000615843 RNASE4P34096 147 aaKnown RBP15.58■□□□□ 0.09
SPAST-203ENST00000615843 NTF4P34130 210 aa15.58■□□□□ 0.08
SPAST-203ENST00000615843 CST9LQ9H4G1 147 aa15.58■□□□□ 0.08
SPAST-203ENST00000615843 FHL1Q13642 323 aa15.58■□□□□ 0.08
SPAST-203ENST00000615843 PPP1R27Q86WC6 154 aa15.58■□□□□ 0.08
SPAST-203ENST00000615843 SLC50A1Q9BRV3 221 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms