RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 ZFP36L1Q07352 338 aaKnown RBP15.48■□□□□ 0.07
GABPB1-212ENST00000615671 CHTOPQ9Y3Y2 248 aaKnown RBP15.47■□□□□ 0.07
GABPB1-212ENST00000615671 SLC25A15Q9Y619 301 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 C1QTNF9P0C862 333 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 SP5Q6BEB4 398 aaPredicted RBP15.47■□□□□ 0.07
GABPB1-212ENST00000615671 RNF182Q8N6D2 247 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 TMEM8BA6NDV4 472 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 ADMP35318 185 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 GATD1Q8NB37 220 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 MRPS18CQ9Y3D5 142 aaKnown RBP15.47■□□□□ 0.07
GABPB1-212ENST00000615671 IGLV3-19P01714 112 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 UCP1P25874 307 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 DSCR9P59020 149 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 TAF1LQ8IZX4 1826 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 ABCA7Q8IZY2 2146 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 PATJQ8NI35 1801 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 CACNG8Q8WXS5 425 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 EPDR1Q9UM22 224 aa15.47■□□□□ 0.07
GABPB1-212ENST00000615671 PIP4P2Q8N4L2 257 aa15.46■□□□□ 0.07
GABPB1-212ENST00000615671 ZNF318Q5VUA4 2279 aa15.46■□□□□ 0.07
GABPB1-212ENST00000615671 CHD5Q8TDI0 1954 aa15.46■□□□□ 0.07
GABPB1-212ENST00000615671 EXOC3-AS1Q8N2X6 119 aa15.46■□□□□ 0.07
GABPB1-212ENST00000615671 PTPRFP10586 1907 aa15.46■□□□□ 0.07
GABPB1-212ENST00000615671 A0A1B0GTI1 187 aa15.46■□□□□ 0.07
GABPB1-212ENST00000615671 DEFB130BP0DP73 79 aa15.46■□□□□ 0.07
GABPB1-212ENST00000615671 DEFB130AP0DP74 79 aa15.46■□□□□ 0.07
GABPB1-212ENST00000615671 PRR30Q53SZ7 412 aaPredicted RBP15.46■□□□□ 0.07
GABPB1-212ENST00000615671 ERVH48-1M5A8F1 160 aa15.46■□□□□ 0.06
GABPB1-212ENST00000615671 SRSF4Q08170 494 aaKnown RBP15.46■□□□□ 0.06
GABPB1-212ENST00000615671 C18orf12Q96KH6 178 aa15.46■□□□□ 0.06
GABPB1-212ENST00000615671 SLC25A39Q9BZJ4 359 aaPredicted RBP15.46■□□□□ 0.06
GABPB1-212ENST00000615671 DOCK3Q8IZD9 2030 aa15.46■□□□□ 0.06
GABPB1-212ENST00000615671 TRBV6-7A0A0A0MS04 114 aa15.45■□□□□ 0.06
GABPB1-212ENST00000615671 CD300EQ496F6 205 aaPredicted RBP15.45■□□□□ 0.06
GABPB1-212ENST00000615671 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
GABPB1-212ENST00000615671 SRSF1Q07955 248 aaKnown RBP eCLIP15.45■□□□□ 0.06
GABPB1-212ENST00000615671 PSME4Q14997 1843 aa15.45■□□□□ 0.06
GABPB1-212ENST00000615671 GATA4P43694 442 aa15.45■□□□□ 0.06
GABPB1-212ENST00000615671 TMEM249Q2WGJ8 235 aa15.45■□□□□ 0.06
GABPB1-212ENST00000615671 NCR2O95944 276 aa15.45■□□□□ 0.06
GABPB1-212ENST00000615671 C1QL4Q86Z23 238 aa15.45■□□□□ 0.06
GABPB1-212ENST00000615671 FAM110DQ8TAY7 271 aaPredicted RBP15.45■□□□□ 0.06
GABPB1-212ENST00000615671 SCRT1Q9BWW7 348 aa15.45■□□□□ 0.06
GABPB1-212ENST00000615671 MBNL3Q9NUK0 354 aaKnown RBP15.45■□□□□ 0.06
GABPB1-212ENST00000615671 FBLIM1Q8WUP2 373 aa15.44■□□□□ 0.06
GABPB1-212ENST00000615671 B4DSR2 109 aa15.44■□□□□ 0.06
GABPB1-212ENST00000615671 COL8A2P25067 703 aa15.44■□□□□ 0.06
GABPB1-212ENST00000615671 A0A1B0GV90 55 aa15.44■□□□□ 0.06
GABPB1-212ENST00000615671 PMS2P5A8MQ11 134 aa15.44■□□□□ 0.06
GABPB1-212ENST00000615671 C5orf24Q7Z6I8 188 aa15.44■□□□□ 0.06
GABPB1-212ENST00000615671 IGHV1-3A0A0C4DH29 117 aa15.44■□□□□ 0.06
GABPB1-212ENST00000615671 TMEM144Q7Z5S9 345 aa15.44■□□□□ 0.06
GABPB1-212ENST00000615671 ZNF319Q9P2F9 582 aa15.44■□□□□ 0.06
GABPB1-212ENST00000615671 BPESC1Q9GZL8 116 aa15.44■□□□□ 0.06
GABPB1-212ENST00000615671 TPTE2P1Q5T6R2 138 aa15.43■□□□□ 0.06
GABPB1-212ENST00000615671 ARHGEF17Q96PE2 2063 aaPredicted RBP15.43■□□□□ 0.06
GABPB1-212ENST00000615671 APC2O95996 2303 aa15.43■□□□□ 0.06
GABPB1-212ENST00000615671 TRAV8-2A0A0B4J237 113 aa15.43■□□□□ 0.06
GABPB1-212ENST00000615671 FOXL1Q12952 345 aa15.43■□□□□ 0.06
GABPB1-212ENST00000615671 IGHV1-8P0DP01 117 aa15.43■□□□□ 0.06
GABPB1-212ENST00000615671 LRRC37AA6NMS7 1700 aa15.43■□□□□ 0.06
GABPB1-212ENST00000615671 SRP19P09132 144 aaKnown RBP15.43■□□□□ 0.06
GABPB1-212ENST00000615671 Q96MF0 132 aa15.43■□□□□ 0.06
GABPB1-212ENST00000615671 NHP2Q9NX24 153 aaKnown RBP15.43■□□□□ 0.06
GABPB1-212ENST00000615671 PEF1Q9UBV8 284 aaKnown RBP15.43■□□□□ 0.06
GABPB1-212ENST00000615671 CYSLTR1Q9Y271 337 aa15.43■□□□□ 0.06
GABPB1-212ENST00000615671 NHLRC3Q5JS37 347 aa15.42■□□□□ 0.06
GABPB1-212ENST00000615671 IL17RELQ6ZVW7 336 aa15.42■□□□□ 0.06
GABPB1-212ENST00000615671 JPT2Q9H910 190 aa15.42■□□□□ 0.06
GABPB1-212ENST00000615671 IGKV1-9A0A0C4DH69 117 aa15.42■□□□□ 0.06
GABPB1-212ENST00000615671 VSIRQ9H7M9 311 aa15.42■□□□□ 0.06
GABPB1-212ENST00000615671 SPATA31B1PQ5VZV4 182 aa15.42■□□□□ 0.06
GABPB1-212ENST00000615671 RPUSD1Q9UJJ7 312 aaKnown RBP15.42■□□□□ 0.06
GABPB1-212ENST00000615671 TMEM178BH3BS89 294 aa15.42■□□□□ 0.06
GABPB1-212ENST00000615671 LOC102723996A0A087X1L8 192 aa15.41■□□□□ 0.06
GABPB1-212ENST00000615671 A0A0A6YYD4 124 aa15.41■□□□□ 0.06
GABPB1-212ENST00000615671 INS-IGF2F8WCM5 200 aa15.41■□□□□ 0.06
GABPB1-212ENST00000615671 INSP01308 110 aa15.41■□□□□ 0.06
GABPB1-212ENST00000615671 DUTP33316 252 aaKnown RBP15.41■□□□□ 0.06
GABPB1-212ENST00000615671 SRRM4A7MD48 611 aaKnown RBP15.41■□□□□ 0.06
GABPB1-212ENST00000615671 SPCS1Q9Y6A9 102 aa15.41■□□□□ 0.06
GABPB1-212ENST00000615671 NTN3O00634 580 aaPredicted RBP15.41■□□□□ 0.06
GABPB1-212ENST00000615671 ZNF876PQ49A33 203 aa15.41■□□□□ 0.06
GABPB1-212ENST00000615671 LYPD2Q6UXB3 125 aa15.41■□□□□ 0.06
GABPB1-212ENST00000615671 FNDC4Q9H6D8 234 aaPredicted RBP15.41■□□□□ 0.06
GABPB1-212ENST00000615671 H3BUT2 72 aa15.41■□□□□ 0.06
GABPB1-212ENST00000615671 TBX6O95947 436 aaPredicted RBP15.41■□□□□ 0.06
GABPB1-212ENST00000615671 Q8TAT8 98 aa15.41■□□□□ 0.06
GABPB1-212ENST00000615671 LSM4Q9Y4Z0 139 aaKnown RBP15.41■□□□□ 0.06
GABPB1-212ENST00000615671 CABIN1Q9Y6J0 2220 aa15.41■□□□□ 0.06
GABPB1-212ENST00000615671 NRXN2Q9P2S2 1712 aa15.4■□□□□ 0.06
GABPB1-212ENST00000615671 OVOL1O14753 267 aa15.4■□□□□ 0.06
GABPB1-212ENST00000615671 LINC00114Q6XXX2 140 aa15.4■□□□□ 0.06
GABPB1-212ENST00000615671 LINC01356Q8N9X3 169 aa15.4■□□□□ 0.06
GABPB1-212ENST00000615671 BRCA1P38398 1863 aaKnown RBP15.4■□□□□ 0.06
GABPB1-212ENST00000615671 PRCDQ00LT1 54 aa15.4■□□□□ 0.06
GABPB1-212ENST00000615671 LAIR2Q6ISS4 152 aa15.4■□□□□ 0.06
GABPB1-212ENST00000615671 CD177Q8N6Q3 437 aa15.4■□□□□ 0.06
GABPB1-212ENST00000615671 THADAQ6YHU6 1953 aa15.4■□□□□ 0.06
GABPB1-212ENST00000615671 PAX4O43316 350 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms