RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 C21orf62Q9NYP8 219 aa7.28□□□□□ -1.24
PDLIM5-222ENST00000615540 CACNA1EQ15878 2313 aa7.28□□□□□ -1.24
PDLIM5-222ENST00000615540 IGFL3Q6UXB1 125 aa7.28□□□□□ -1.24
PDLIM5-222ENST00000615540 OR10J6PQ8NGY7 276 aa7.28□□□□□ -1.24
PDLIM5-222ENST00000615540 WFDC12Q8WWY7 111 aa7.28□□□□□ -1.24
PDLIM5-222ENST00000615540 BTF3P20290 206 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 LMO1P25800 156 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 TPTE2P1Q5T6R2 138 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 EXOC3-AS1Q8N2X6 119 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 HLA-DQA1P01909 254 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 SOD3P08294 240 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 PLA2G5P39877 138 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 TMEM97Q5BJF2 176 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 C7orf69Q9H7B7 122 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 A0A1B0GW64 132 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 M0R143 59 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 SIAH2O43255 324 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 AREGP15514 252 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 RPL15P61313 204 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 BRD3OSQ6XYD6 125 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 TMEM116Q8NCL8 245 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 PLA2G2EQ9NZK7 142 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 HOXA5P20719 270 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 CA7P43166 264 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 PRSS8Q16651 343 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 GLMPQ8WWB7 406 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 RPP21Q9H633 154 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 EML6Q6ZMW3 1958 aa7.27□□□□□ -1.25
PDLIM5-222ENST00000615540 TRAV40A0A0B4J280 105 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 HAX1O00165 279 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 GCGP01275 180 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 CKS2P33552 79 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 DLX6P56179 175 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 DYNLRB2Q8TF09 96 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 CACNG8Q8WXS5 425 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 HSPB8Q9UJY1 196 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 HIGD1CA8MV81 97 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 ID1P41134 155 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 HBBP68871 147 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 C2orf83Q53S99 150 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 MAPK1IP1LQ8NDC0 245 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 ST6GALNAC3Q8NDV1 305 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 STAG3L2P0CL84 134 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 STAG3L3P0CL85 134 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 SRD5A1P18405 259 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 HINT1P49773 126 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 CRIP3Q6Q6R5 217 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 FAM169BQ8N8A8 192 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 NPPCP23582 126 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 COX19Q49B96 90 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 RUSC1-AS1Q66K80 236 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 AGMATQ9BSE5 352 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 TUBA4BQ9H853 241 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 IGHV3OR16-12A0A075B7B8 117 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 CD99P14209 185 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 CEACAM8P31997 349 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 KCNS1Q96KK3 526 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 TMEM208Q9BTX3 173 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 EPDR1Q9UM22 224 aa7.26□□□□□ -1.25
PDLIM5-222ENST00000615540 IGKV2-40A0A087WW87 121 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 UBE2CO00762 179 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 SERF1AO75920 110 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 IGKV2D-40P01614 121 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 NMUP48645 174 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 HIST1H1AQ02539 215 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 FAM90A2PQ658T7 463 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 ST6GALNAC6Q969X2 333 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 DKK4Q9UBT3 224 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 TBL2Q9Y4P3 447 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 IZUMO1RA6ND01 250 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 RNASE2P10153 161 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 DDTP30046 118 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 OR4B1Q8NGF8 309 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 RPLP1P05386 114 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 UNQ6494/PRO21346Q6UXR6 183 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 RNF125Q96EQ8 232 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 TMEM191AQ9H0A3 160 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 MT-ND6P03923 174 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 PSG1P11464 419 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 UQCRFS1P47985 274 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 TMEM170AQ8WVE7 144 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 COL25A1Q9BXS0 654 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 TEX38Q6PEX7 206 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 SEM1Q6ZVN7 128 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 C5orf30Q96GV9 206 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 LINC00479Q96M42 142 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 MSRB2Q9Y3D2 182 aa7.25□□□□□ -1.25
PDLIM5-222ENST00000615540 PTPRZ1P23471 2315 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 TRAV1-1A0A0B4J248 108 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 A0A1B0GV90 55 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 LINC00587B1AMM8 73 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 PRB1P04280 392 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 FOLR2P14207 255 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 RPL7P18124 248 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 RNASE4P34096 147 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 ZNF257Q9Y2Q1 563 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 PCNX3Q9H6A9 2034 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 PPIFP30405 207 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 RHOGP84095 191 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 ZNF833PQ6ZTB9 187 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms