RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 PROP1O75360 226 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 GRAMD2BQ96HH9 432 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 DIRC2Q96SL1 478 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 MAP1LC3CQ9BXW4 147 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 GSX1Q9H4S2 264 aaPredicted RBP10.25□□□□□ -0.77
MSH6-213ENST00000614496 V9GYV3 84 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 MUC21A0A0G2JKD1 596 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 MUC21A0A140T8X8 626 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 NCBP2LA6PVI3 153 aaKnown RBP10.25□□□□□ -0.77
MSH6-213ENST00000614496 F2RL2O00254 374 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 BTF3P20290 206 aaKnown RBP10.25□□□□□ -0.77
MSH6-213ENST00000614496 MUC21Q5SSG8 566 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 KIR3DL3Q8N743 410 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 SRSF12Q8WXF0 261 aaKnown RBP10.25□□□□□ -0.77
MSH6-213ENST00000614496 RCHY1Q96PM5 261 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 HCFC1P51610 2035 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 WNT2P09544 360 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 NPSP0C0P6 89 aa10.25□□□□□ -0.77
MSH6-213ENST00000614496 A0A1W2PS18 150 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 PRRX1P54821 245 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 LPAR2Q9HBW0 351 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 TMEM14BQ9NUH8 114 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 EYSQ5T1H1 3165 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 SRRM4A7MD48 611 aaKnown RBP10.24□□□□□ -0.77
MSH6-213ENST00000614496 CD24P25063 80 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 PPOXP50336 477 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 LOXL3P58215 753 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 C17orf58Q2M2W7 97 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 GUCD1Q96NT3 240 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.24□□□□□ -0.77
MSH6-213ENST00000614496 RNASE2P10153 161 aaKnown RBP10.24□□□□□ -0.77
MSH6-213ENST00000614496 PDLIM4P50479 330 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 HBBP68871 147 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 CACNG8Q8WXS5 425 aa10.24□□□□□ -0.77
MSH6-213ENST00000614496 RBM14Q96PK6 669 aaKnown RBP10.24□□□□□ -0.77
MSH6-213ENST00000614496 MCRIP2Q9BUT9 160 aaKnown RBP10.24□□□□□ -0.77
MSH6-213ENST00000614496 REV3LO60673 3130 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 OR4C46A6NHA9 309 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 PCP4P48539 62 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 ZNF474Q6S9Z5 364 aaPredicted RBP10.23□□□□□ -0.77
MSH6-213ENST00000614496 UNQ5815/PRO19632Q6UWF5 114 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 HILPDAQ9Y5L2 63 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 ASCL2Q99929 193 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 TMEM70Q9BUB7 260 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 AAMDCQ9H7C9 122 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 LINC00312Q9Y6C7 94 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 CORTO00230 105 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 BMPR1BO00238 502 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 FAM87AP0C7U9 286 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 P0C879 139 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 DLX1P56177 255 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 C2orf83Q53S99 150 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 OR10J3Q5JRS4 329 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 TMEM136Q6ZRR5 245 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 FBXL15Q9H469 300 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 PIEZO2Q9H5I5 2752 aa10.23□□□□□ -0.77
MSH6-213ENST00000614496 FAM90A27PA6NNH2 459 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 CA7P43166 264 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 NUP35Q8NFH5 326 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 TSKUQ8WUA8 353 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 FAM168AQ92567 244 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 GAFA1Q96PS6 74 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 USP34Q70CQ2 3546 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 SH2D7A6NKC9 451 aaPredicted RBP10.22□□□□□ -0.77
MSH6-213ENST00000614496 MC5RP33032 325 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 UQCRFS1P47985 274 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 LOXL4Q96JB6 756 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 EPDR1Q9UM22 224 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 IGHV3-35A0A0C4DH35 117 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 TCRBV4S1A1TA0A5B7 111 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 TM4SF5O14894 197 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 GNG7O60262 68 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 IGHG3P01860 377 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 AARDQ4LEZ3 155 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 TMEM186Q96B77 213 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 ZNF257Q9Y2Q1 563 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 TRAV8-1A0A0A6YYK1 113 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 SCGB2A1O75556 95 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 ZNF138P52744 262 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 RBPJQ06330 500 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 SLAQ13239 276 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 NIT1Q86X76 327 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 NEUROG1Q92886 237 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 GPR82Q96P67 336 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 C20orf144Q9BQM9 153 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 CLEC7AQ9BXN2 247 aa10.22□□□□□ -0.77
MSH6-213ENST00000614496 LYNX1G3V0Z9 82 aa10.21□□□□□ -0.77
MSH6-213ENST00000614496 LYNX1P0DP58 116 aa10.21□□□□□ -0.77
MSH6-213ENST00000614496 BSPH1Q075Z2 132 aa10.21□□□□□ -0.77
MSH6-213ENST00000614496 Q0VG73 95 aa10.21□□□□□ -0.77
MSH6-213ENST00000614496 TPTE2P1Q5T6R2 138 aa10.21□□□□□ -0.77
MSH6-213ENST00000614496 LSM4Q9Y4Z0 139 aaKnown RBP10.21□□□□□ -0.77
MSH6-213ENST00000614496 NUDT3O95989 172 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 FCGR2BP31994 310 aaPredicted RBP10.21□□□□□ -0.78
MSH6-213ENST00000614496 RIGQ13278 110 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 S100A7AQ86SG5 101 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 Q9H3A6 140 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 RPP21Q9H633 154 aaKnown RBP10.21□□□□□ -0.78
MSH6-213ENST00000614496 C17orf100A8MU93 164 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 SSBP2P81877 361 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms