RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 SMIM3Q9BZL3 60 aa16.63■□□□□ 0.25
CBWD3-207ENST00000611426 NDUFA4L2Q9NRX3 87 aa16.63■□□□□ 0.25
CBWD3-207ENST00000611426 TEX50A0A1B0GTY4 177 aa16.62■□□□□ 0.25
CBWD3-207ENST00000611426 IGLV1-51P01701 117 aa16.62■□□□□ 0.25
CBWD3-207ENST00000611426 METTL15P1P0C7V9 234 aa16.62■□□□□ 0.25
CBWD3-207ENST00000611426 APELAP0DMC3 54 aa16.62■□□□□ 0.25
CBWD3-207ENST00000611426 ARL16Q0P5N6 197 aa16.62■□□□□ 0.25
CBWD3-207ENST00000611426 PRSS8Q16651 343 aa16.62■□□□□ 0.25
CBWD3-207ENST00000611426 ATP6V1FQ16864 119 aa16.62■□□□□ 0.25
CBWD3-207ENST00000611426 BSXQ3C1V8 233 aa16.62■□□□□ 0.25
CBWD3-207ENST00000611426 LRRC20Q8TCA0 184 aa16.62■□□□□ 0.25
CBWD3-207ENST00000611426 PINX1Q96BK5 328 aaKnown RBP16.62■□□□□ 0.25
CBWD3-207ENST00000611426 ZNF430Q9H8G1 570 aaPredicted RBP16.62■□□□□ 0.25
CBWD3-207ENST00000611426 NMBP08949 121 aa16.61■□□□□ 0.25
CBWD3-207ENST00000611426 SEC11BP0C7V7 166 aa16.61■□□□□ 0.25
CBWD3-207ENST00000611426 RAB14P61106 215 aa16.61■□□□□ 0.25
CBWD3-207ENST00000611426 DEFA5Q01523 94 aa16.61■□□□□ 0.25
CBWD3-207ENST00000611426 KLF5Q13887 457 aaPredicted RBP16.61■□□□□ 0.25
CBWD3-207ENST00000611426 TNXAQ16473 311 aa16.61■□□□□ 0.25
CBWD3-207ENST00000611426 USMG5Q96IX5 58 aa16.61■□□□□ 0.25
CBWD3-207ENST00000611426 COMMD5Q9GZQ3 224 aa16.61■□□□□ 0.25
CBWD3-207ENST00000611426 ZMAT4Q9H898 229 aa16.61■□□□□ 0.25
CBWD3-207ENST00000611426 PLEKHA3Q9HB20 300 aa16.61■□□□□ 0.25
CBWD3-207ENST00000611426 HEYLQ9NQ87 328 aaPredicted RBP16.61■□□□□ 0.25
CBWD3-207ENST00000611426 PEF1Q9UBV8 284 aaKnown RBP16.61■□□□□ 0.25
CBWD3-207ENST00000611426 SPP1P10451 314 aa16.6■□□□□ 0.25
CBWD3-207ENST00000611426 HOXA1P49639 335 aaPredicted RBP16.6■□□□□ 0.25
CBWD3-207ENST00000611426 VWC2Q2TAL6 325 aa16.6■□□□□ 0.25
CBWD3-207ENST00000611426 TMEM217Q8N7C4 229 aa16.6■□□□□ 0.25
CBWD3-207ENST00000611426 GGACTQ9BVM4 153 aa16.6■□□□□ 0.25
CBWD3-207ENST00000611426 ENY2Q9NPA8 101 aa16.6■□□□□ 0.25
CBWD3-207ENST00000611426 LINC00862A6NCI5 91 aa16.59■□□□□ 0.25
CBWD3-207ENST00000611426 SLC38A11Q08AI6 406 aa16.59■□□□□ 0.25
CBWD3-207ENST00000611426 CLINT1Q14677 625 aa16.59■□□□□ 0.25
CBWD3-207ENST00000611426 SPINK9Q5DT21 86 aa16.59■□□□□ 0.25
CBWD3-207ENST00000611426 ZNF343Q6P1L6 599 aa16.59■□□□□ 0.25
CBWD3-207ENST00000611426 OR9G4Q8NGQ1 327 aa16.59■□□□□ 0.25
CBWD3-207ENST00000611426 MED9Q9NWA0 146 aa16.59■□□□□ 0.25
CBWD3-207ENST00000611426 PRSS46E5RG02 174 aa16.58■□□□□ 0.24
CBWD3-207ENST00000611426 SYNJ2BPP57105 145 aa16.58■□□□□ 0.24
CBWD3-207ENST00000611426 Q8N1Y9 231 aa16.58■□□□□ 0.24
CBWD3-207ENST00000611426 SLC24A4Q8NFF2 622 aa16.58■□□□□ 0.24
CBWD3-207ENST00000611426 OR10P1Q8NGE3 313 aa16.58■□□□□ 0.24
CBWD3-207ENST00000611426 TMEM170AQ8WVE7 144 aa16.58■□□□□ 0.24
CBWD3-207ENST00000611426 TMED6Q8WW62 240 aa16.58■□□□□ 0.24
CBWD3-207ENST00000611426 SRSF12Q8WXF0 261 aaKnown RBP16.58■□□□□ 0.24
CBWD3-207ENST00000611426 GNPNAT1Q96EK6 184 aaPredicted RBP16.58■□□□□ 0.24
CBWD3-207ENST00000611426 SRSF8Q9BRL6 282 aaKnown RBP16.58■□□□□ 0.24
CBWD3-207ENST00000611426 CGB1A6NKQ9 187 aa16.57■□□□□ 0.24
CBWD3-207ENST00000611426 ACTL6BO94805 426 aa16.57■□□□□ 0.24
CBWD3-207ENST00000611426 C2orf83Q53S99 150 aa16.57■□□□□ 0.24
CBWD3-207ENST00000611426 TMEM147Q9BVK8 224 aa16.57■□□□□ 0.24
CBWD3-207ENST00000611426 FNDC10F2Z333 226 aa16.56■□□□□ 0.24
CBWD3-207ENST00000611426 IFNA10P01566 189 aa16.56■□□□□ 0.24
CBWD3-207ENST00000611426 IFNA5P01569 189 aa16.56■□□□□ 0.24
CBWD3-207ENST00000611426 TRBV12-3P01733 135 aa16.56■□□□□ 0.24
CBWD3-207ENST00000611426 IGHV4-30-4P0DP06 118 aa16.56■□□□□ 0.24
CBWD3-207ENST00000611426 MYOD1P15172 320 aa16.56■□□□□ 0.24
CBWD3-207ENST00000611426 NPY1RP25929 384 aa16.56■□□□□ 0.24
CBWD3-207ENST00000611426 SULT1A2P50226 295 aa16.56■□□□□ 0.24
CBWD3-207ENST00000611426 RPEL1Q2QD12 228 aa16.56■□□□□ 0.24
CBWD3-207ENST00000611426 IL34Q6ZMJ4 242 aa16.56■□□□□ 0.24
CBWD3-207ENST00000611426 MUC7Q8TAX7 377 aa16.56■□□□□ 0.24
CBWD3-207ENST00000611426 RNF141Q8WVD5 230 aa16.56■□□□□ 0.24
CBWD3-207ENST00000611426 A0A1B0GW64 132 aa16.55■□□□□ 0.24
CBWD3-207ENST00000611426 RAB11AP62491 216 aa16.55■□□□□ 0.24
CBWD3-207ENST00000611426 DLK1P80370 383 aa16.55■□□□□ 0.24
CBWD3-207ENST00000611426 PVRIGQ6DKI7 326 aa16.55■□□□□ 0.24
CBWD3-207ENST00000611426 HSD17B13Q7Z5P4 300 aaPredicted RBP16.55■□□□□ 0.24
CBWD3-207ENST00000611426 LILRB2Q8N423 598 aa16.55■□□□□ 0.24
CBWD3-207ENST00000611426 SAT2Q96F10 170 aaPredicted RBP16.55■□□□□ 0.24
CBWD3-207ENST00000611426 PSMG3Q9BT73 122 aaPredicted RBP16.55■□□□□ 0.24
CBWD3-207ENST00000611426 RAB5CP51148 216 aa16.54■□□□□ 0.24
CBWD3-207ENST00000611426 FAM74A1Q5RGS3 127 aa16.54■□□□□ 0.24
CBWD3-207ENST00000611426 OR8G2PQ6IF36 304 aa16.54■□□□□ 0.24
CBWD3-207ENST00000611426 ZNF114Q8NC26 417 aa16.54■□□□□ 0.24
CBWD3-207ENST00000611426 UQCC1Q9NVA1 299 aa16.54■□□□□ 0.24
CBWD3-207ENST00000611426 PRH1P02810 166 aa16.53■□□□□ 0.24
CBWD3-207ENST00000611426 RNASE2P10153 161 aaKnown RBP16.53■□□□□ 0.24
CBWD3-207ENST00000611426 ATP6V0CP27449 155 aa16.53■□□□□ 0.24
CBWD3-207ENST00000611426 RPL27AP46776 148 aaKnown RBP16.53■□□□□ 0.24
CBWD3-207ENST00000611426 ERHP84090 104 aaKnown RBP16.53■□□□□ 0.24
CBWD3-207ENST00000611426 RHOGP84095 191 aa16.53■□□□□ 0.24
CBWD3-207ENST00000611426 ATP5G2Q06055 141 aa16.53■□□□□ 0.24
CBWD3-207ENST00000611426 WDR61Q9GZS3 305 aaKnown RBP16.53■□□□□ 0.24
CBWD3-207ENST00000611426 TIMM9Q9Y5J7 89 aa16.53■□□□□ 0.24
CBWD3-207ENST00000611426 IGLC7A0M8Q6 106 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 FAM223BA6NKX1 122 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 A8MZ25 164 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 UMAD1C9J7I0 102 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 E7EUB6 86 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 CSN3P07498 182 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 CASC10Q5T4H9 136 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 FAM223AQ8IWN6 122 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 TTC9CQ8N5M4 171 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 HSD17B11Q8NBQ5 300 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 TM2D3Q9BRN9 247 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 HINT2Q9BX68 163 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 C19orf73Q9NVV2 129 aa16.52■□□□□ 0.24
CBWD3-207ENST00000611426 PLA2G2EQ9NZK7 142 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms