RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 Q9UFV3 132 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 PCNX1Q96RV3 2341 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 TRAV5A0A0B4J249 113 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 H7C2G1 150 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 HIST1H2BKO60814 126 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 CEACAM4O75871 244 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 HIST1H2BJP06899 126 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 HIST1H2BOP23527 126 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 HIST1H2BBP33778 126 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 HIST1H2BDP58876 126 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 HIST1H2BCP62807 126 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 HIST2H2BEQ16778 126 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 FER1L6-AS1Q8NA97 138 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 HIST1H2BHQ93079 126 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 HIST1H2BNQ99877 126 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 HIST1H2BMQ99879 126 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 FANCMQ8IYD8 2048 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 STAG3L2P0CL84 134 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 STAG3L3P0CL85 134 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 IGHV1-8P0DP01 117 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 Q6AWC8 147 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 TEX38Q6PEX7 206 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 Q6ZS49 121 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 SSBP4Q9BWG4 385 aaPredicted RBP11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 OSTCQ9NRP0 149 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 HELZP42694 1942 aaKnown RBP11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 IGKV1D-17A0A075B6S4 117 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 UBE2L6O14933 153 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 CTAG1AP78358 180 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 RHOGP84095 191 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 LOC107984156A0A0G2JMH3 177 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 A0A0G2JRQ6 117 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 FABP2P12104 132 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 ADMP35318 185 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 Q6ZS92 163 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 ARL17AQ8IVW1 177 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 TRAV1-1A0A0B4J248 108 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 SPATA31B1PQ5VZV4 182 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 ZNF474Q6S9Z5 364 aaPredicted RBP11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 C1QL4Q86Z23 238 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 DOCK9Q9BZ29 2069 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 USF3Q68DE3 2245 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 COLCA1Q6ZS62 124 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 C14orf144Q96I85 54 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 PROK2Q9HC23 129 aa11.74□□□□□ -0.53
PCDHB16-201ENST00000609684 LHFPL4Q7Z7J7 247 aa11.73□□□□□ -0.53
PCDHB16-201ENST00000609684 K7ERU9 68 aa11.73□□□□□ -0.53
PCDHB16-201ENST00000609684 PRSS2P07478 247 aa11.73□□□□□ -0.53
PCDHB16-201ENST00000609684 PRSS8Q16651 343 aa11.73□□□□□ -0.53
PCDHB16-201ENST00000609684 ABCA1O95477 2261 aa11.73□□□□□ -0.53
PCDHB16-201ENST00000609684 LGALS3P17931 250 aaKnown RBP11.73□□□□□ -0.53
PCDHB16-201ENST00000609684 GAFA1Q96PS6 74 aa11.73□□□□□ -0.53
PCDHB16-201ENST00000609684 TMEM160Q9NX00 188 aa11.73□□□□□ -0.53
PCDHB16-201ENST00000609684 PLXNA2O75051 1894 aa11.73□□□□□ -0.53
PCDHB16-201ENST00000609684 COLCA2A8K830 154 aa11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 MYOD1P15172 320 aa11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 ZNF600Q6ZNG1 722 aa11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 Q6ZRM9 215 aa11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 MGST2Q99735 147 aa11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 SEPSECSQ9HD40 501 aaKnown RBP11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 A0A1B0GV90 55 aa11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 A0A1B0GW15 77 aa11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 ORMDL3Q8N138 153 aa11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 C1orf147Q96MC9 270 aaPredicted RBP11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 CA1P00915 261 aaPredicted RBP11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 CXCL1P09341 107 aa11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 PSG8Q9UQ74 426 aa11.72□□□□□ -0.53
PCDHB16-201ENST00000609684 KIR3DL3Q8N743 410 aa11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 NUP37Q8NFH4 326 aa11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 CADP27708 2225 aa11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 NRN1Q9NPD7 142 aa11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 TRAV8-6A0A0B4J262 113 aa11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 IGHV1-3A0A0C4DH29 117 aa11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 FABP5P3A8MUU1 101 aa11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 OR11H12B2RN74 326 aa11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 PRB4P10163 310 aaPredicted RBP11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 ARL6IP6Q8N6S5 226 aa11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 OR11H1Q8NG94 326 aa11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 OR11H2Q8NH07 326 aa11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 ST6GALNAC6Q969X2 333 aa11.71□□□□□ -0.53
PCDHB16-201ENST00000609684 A0A1B0GW64 132 aa11.71□□□□□ -0.54
PCDHB16-201ENST00000609684 LYL1P12980 280 aa11.71□□□□□ -0.54
PCDHB16-201ENST00000609684 SLC25A48Q6ZT89 311 aaKnown RBP11.71□□□□□ -0.54
PCDHB16-201ENST00000609684 C8orf46Q8TAG6 207 aa11.71□□□□□ -0.54
PCDHB16-201ENST00000609684 SLC50A1Q9BRV3 221 aa11.71□□□□□ -0.54
PCDHB16-201ENST00000609684 IGKV1-6A0A0C4DH72 117 aa11.7□□□□□ -0.54
PCDHB16-201ENST00000609684 TRAV40A0A0B4J280 105 aa11.7□□□□□ -0.54
PCDHB16-201ENST00000609684 KLRD1Q13241 179 aa11.7□□□□□ -0.54
PCDHB16-201ENST00000609684 TMEM167AQ8TBQ9 72 aa11.7□□□□□ -0.54
PCDHB16-201ENST00000609684 AGMATQ9BSE5 352 aa11.7□□□□□ -0.54
PCDHB16-201ENST00000609684 DERL1Q9BUN8 251 aa11.7□□□□□ -0.54
PCDHB16-201ENST00000609684 LINC00527Q9UJ94 153 aa11.7□□□□□ -0.54
PCDHB16-201ENST00000609684 TRBV24-1A0A075B6N3 115 aa11.7□□□□□ -0.54
PCDHB16-201ENST00000609684 SNAI2O43623 268 aa11.7□□□□□ -0.54
PCDHB16-201ENST00000609684 RNASE4P34096 147 aaKnown RBP11.7□□□□□ -0.54
PCDHB16-201ENST00000609684 PRDM13Q9H4Q3 707 aa11.7□□□□□ -0.54
PCDHB16-201ENST00000609684 TMEM242Q9NWH2 141 aa11.7□□□□□ -0.54
PCDHB16-201ENST00000609684 TANC1Q9C0D5 1861 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms