RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 OR4C46A6NHA9 309 aa12.4□□□□□ -0.42
LINC00240-203ENST00000606878 SYNGR2O43760 224 aa12.4□□□□□ -0.42
LINC00240-203ENST00000606878 IGKV1-17P01599 117 aa12.4□□□□□ -0.42
LINC00240-203ENST00000606878 TCRBP04435 133 aa12.4□□□□□ -0.42
LINC00240-203ENST00000606878 NPPCP23582 126 aa12.4□□□□□ -0.42
LINC00240-203ENST00000606878 OR10J1P30954 320 aa12.4□□□□□ -0.42
LINC00240-203ENST00000606878 GPX4P36969 197 aaPredicted RBP12.4□□□□□ -0.42
LINC00240-203ENST00000606878 RAB11AP62491 216 aa12.4□□□□□ -0.42
LINC00240-203ENST00000606878 RPP30P78346 268 aaKnown RBP12.4□□□□□ -0.42
LINC00240-203ENST00000606878 HAGHQ16775 308 aa12.4□□□□□ -0.42
LINC00240-203ENST00000606878 NPIPB3Q92617 1050 aa12.4□□□□□ -0.42
LINC00240-203ENST00000606878 SRD5A3Q9H8P0 318 aa12.4□□□□□ -0.42
LINC00240-203ENST00000606878 IGHV3OR16-13A0A075B7E8 117 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 IGHV3-74A0A0B4J1X5 117 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 A0A1W2PS18 150 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 ADAP1O75689 374 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 IGLC1P0CG04 106 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 CMC4P56277 68 aaPredicted RBP12.39□□□□□ -0.43
LINC00240-203ENST00000606878 YPEL3P61236 119 aaPredicted RBP12.39□□□□□ -0.43
LINC00240-203ENST00000606878 LINC00322Q6ZN03 302 aaPredicted RBP12.39□□□□□ -0.43
LINC00240-203ENST00000606878 ACY3Q96HD9 319 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 RCHY1Q96PM5 261 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 METTL26Q96S19 204 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 TM2D3Q9BRN9 247 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 MAGT1Q9H0U3 335 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 TMEM231Q9H6L2 316 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 ZFAND3Q9H8U3 227 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 BATF3Q9NR55 127 aa12.39□□□□□ -0.43
LINC00240-203ENST00000606878 PAIP2BQ9ULR5 123 aaKnown RBP12.39□□□□□ -0.43
LINC00240-203ENST00000606878 TENM3Q9P273 2699 aa12.38□□□□□ -0.43
LINC00240-203ENST00000606878 IAPPP10997 89 aa12.38□□□□□ -0.43
LINC00240-203ENST00000606878 PAFAH1B2P68402 229 aa12.38□□□□□ -0.43
LINC00240-203ENST00000606878 ID3Q02535 119 aa12.38□□□□□ -0.43
LINC00240-203ENST00000606878 MZT2BQ6NZ67 158 aa12.38□□□□□ -0.43
LINC00240-203ENST00000606878 NARS2Q96I59 477 aaKnown RBP12.38□□□□□ -0.43
LINC00240-203ENST00000606878 WFDC10AQ9H1F0 79 aa12.38□□□□□ -0.43
LINC00240-203ENST00000606878 C20orf85Q9H1P6 137 aa12.38□□□□□ -0.43
LINC00240-203ENST00000606878 VSIRQ9H7M9 311 aa12.38□□□□□ -0.43
LINC00240-203ENST00000606878 PTTG2Q9NZH5 202 aa12.38□□□□□ -0.43
LINC00240-203ENST00000606878 TRAV6A0A075B6T7 132 aa12.37□□□□□ -0.43
LINC00240-203ENST00000606878 FAM240BA0A1B0GVZ2 78 aa12.37□□□□□ -0.43
LINC00240-203ENST00000606878 RBMY1BA6NDE4 496 aaKnown RBP12.37□□□□□ -0.43
LINC00240-203ENST00000606878 RBMY1EA6NEQ0 496 aaKnown RBP12.37□□□□□ -0.43
LINC00240-203ENST00000606878 WRBO00258 174 aa12.37□□□□□ -0.43
LINC00240-203ENST00000606878 APOHP02749 345 aaPredicted RBP12.37□□□□□ -0.43
LINC00240-203ENST00000606878 RBMY1DP0C7P1 496 aaKnown RBP12.37□□□□□ -0.43
LINC00240-203ENST00000606878 RD3LP0DJH9 198 aa12.37□□□□□ -0.43
LINC00240-203ENST00000606878 ZNF846Q147U1 533 aa12.37□□□□□ -0.43
LINC00240-203ENST00000606878 FAM90A2PQ658T7 463 aa12.37□□□□□ -0.43
LINC00240-203ENST00000606878 TCF24Q7RTU0 167 aa12.37□□□□□ -0.43
LINC00240-203ENST00000606878 MITD1Q8WV92 249 aa12.37□□□□□ -0.43
LINC00240-203ENST00000606878 ST8SIA2Q92186 375 aa12.37□□□□□ -0.43
LINC00240-203ENST00000606878 SLC35E1Q96K37 410 aa12.37□□□□□ -0.43
LINC00240-203ENST00000606878 SPATA25Q9BR10 227 aa12.37□□□□□ -0.43
LINC00240-203ENST00000606878 WDR12Q9GZL7 423 aaKnown RBP12.37□□□□□ -0.43
LINC00240-203ENST00000606878 IGHV3-66A0A0C4DH42 116 aa12.36□□□□□ -0.43
LINC00240-203ENST00000606878 NKX2-1P43699 371 aaPredicted RBP12.36□□□□□ -0.43
LINC00240-203ENST00000606878 RPL11P62913 178 aaKnown RBP12.36□□□□□ -0.43
LINC00240-203ENST00000606878 GAMTQ14353 236 aa12.36□□□□□ -0.43
LINC00240-203ENST00000606878 LILRB2Q8N423 598 aa12.36□□□□□ -0.43
LINC00240-203ENST00000606878 IGKV3-7A0A075B6H7 116 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 MPTX1A8MV57 137 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 DFFBO76075 338 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 H2AFB2P0C5Z0 115 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 CRYBB3P26998 211 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 TFPI2P48307 235 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 SPANXN5Q5MJ07 72 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 GBGT1Q8N5D6 347 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 GRAMD2BQ96HH9 432 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 FAM110AQ9BQ89 295 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 NUDT15Q9NV35 164 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 GSKIPQ9P0R6 139 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 UBQLN2Q9UHD9 624 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 STRAPQ9Y3F4 350 aaKnown RBP12.35□□□□□ -0.43
LINC00240-203ENST00000606878 NBEAL2Q6ZNJ1 2754 aa12.35□□□□□ -0.43
LINC00240-203ENST00000606878 LOC102724200A0A096LPH7 203 aaPredicted RBP12.34□□□□□ -0.43
LINC00240-203ENST00000606878 ZFP92A6NM28 416 aa12.34□□□□□ -0.43
LINC00240-203ENST00000606878 DNASE2O00115 360 aaPredicted RBP12.34□□□□□ -0.43
LINC00240-203ENST00000606878 TOMM40O96008 361 aa12.34□□□□□ -0.43
LINC00240-203ENST00000606878 FABP1P07148 127 aa12.34□□□□□ -0.43
LINC00240-203ENST00000606878 POLR2GP62487 172 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00240-203ENST00000606878 ASAH1Q13510 395 aa12.34□□□□□ -0.43
LINC00240-203ENST00000606878 IAH1Q2TAA2 248 aaPredicted RBP12.34□□□□□ -0.43
LINC00240-203ENST00000606878 OR4D5Q8NGN0 318 aa12.34□□□□□ -0.43
LINC00240-203ENST00000606878 UPK1BO75841 260 aa12.33□□□□□ -0.44
LINC00240-203ENST00000606878 PSG1P11464 419 aa12.33□□□□□ -0.44
LINC00240-203ENST00000606878 WFDC3Q8IUB2 231 aa12.33□□□□□ -0.44
LINC00240-203ENST00000606878 ZNF431Q8TF32 576 aaPredicted RBP12.33□□□□□ -0.44
LINC00240-203ENST00000606878 GGTLC1Q9BX51 225 aa12.33□□□□□ -0.44
LINC00240-203ENST00000606878 PSENENQ9NZ42 101 aa12.33□□□□□ -0.44
LINC00240-203ENST00000606878 TBC1D24Q9ULP9 559 aa12.33□□□□□ -0.44
LINC00240-203ENST00000606878 IL4P05112 153 aa12.32□□□□□ -0.44
LINC00240-203ENST00000606878 HNRNPCP07910 306 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC00240-203ENST00000606878 P2RY1P47900 373 aa12.32□□□□□ -0.44
LINC00240-203ENST00000606878 EIF2B2P49770 351 aaKnown RBP12.32□□□□□ -0.44
LINC00240-203ENST00000606878 ODF3L2Q3SX64 289 aa12.32□□□□□ -0.44
LINC00240-203ENST00000606878 ZBTB8BQ8NAP8 495 aaPredicted RBP12.32□□□□□ -0.44
LINC00240-203ENST00000606878 OR51G1Q8NGK1 321 aa12.32□□□□□ -0.44
LINC00240-203ENST00000606878 SMIM8Q96KF7 97 aa12.32□□□□□ -0.44
LINC00240-203ENST00000606878 CITED4Q96RK1 184 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms