RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 IGFBP2P18065 325 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 C5orf67F2Z3F1 127 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.33□□□□□ -1.24
CSMD1-216ENST00000602557 C3orf79P0CE67 100 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 NAPSAO96009 420 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 ATP5J2P56134 94 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 RSPO4Q2I0M5 234 aaPredicted RBP7.33□□□□□ -1.24
CSMD1-216ENST00000602557 ITGB1BP1O14713 200 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 IGKCP01834 107 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 RNF115Q9Y4L5 304 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 NLRC5Q86WI3 1866 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 SNRPD3P62318 126 aaKnown RBP7.33□□□□□ -1.24
CSMD1-216ENST00000602557 GAGE1Q13065 139 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 ATXN8Q156A1 80 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 FAM106AQ4KMX7 169 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 DNM1P46Q6ZS02 220 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 Q6ZVH6 145 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 SMIM20Q8N5G0 67 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 DEPPQ9NTK1 212 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 TMEM238C9JI98 176 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 HAX1O00165 279 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 GATA2P23769 480 aaPredicted RBP7.32□□□□□ -1.24
CSMD1-216ENST00000602557 ZNF658BQ4V348 819 aaPredicted RBP7.32□□□□□ -1.24
CSMD1-216ENST00000602557 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.32□□□□□ -1.24
CSMD1-216ENST00000602557 C2orf82Q6UX34 121 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 OCC1Q8TAD7 63 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 S4R3C0 116 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 CEACAM8P31997 349 aaPredicted RBP7.32□□□□□ -1.24
CSMD1-216ENST00000602557 ZNF525Q8N782 197 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 SLC25A2Q9BXI2 301 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A10PA6NDY2 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A18PA6NE21 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A16PA6NEW6 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A20PA6NIJ5 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A8PA6NJQ4 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A7PA6NKC0 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A22PA8MWA6 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A12PA8MX19 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A5PA8MXJ8 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A23PA8MXZ1 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 B5MCH6 92 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A15PP0C7V4 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A13PP0C7W8 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A14PP0C7W9 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A24PP0C7X0 464 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 MGST2Q99735 147 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 SIP14410 1827 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 S100A7L2Q5SY68 101 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 SLC25A45Q8N413 288 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 IGHV3-66A0A0C4DH42 116 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 CD55P08174 381 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 IGHV3-23P01764 117 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 ATP1A1-AS1Q5TC04 95 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 OR9G4Q8NGQ1 327 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 MS4A6AQ9H2W1 248 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 COX6B1P14854 86 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 CDKN1BP46527 198 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 PCSK4Q6UW60 755 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 CCL19Q99731 98 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 PTGDSP41222 190 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 COX6A1P12074 109 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 ZNF146Q15072 292 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 SAXO1Q8IYX7 474 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 FGF11Q92914 225 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 DCTN5Q9BTE1 182 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 MRPL32Q9BYC8 188 aaKnown RBP7.32□□□□□ -1.24
CSMD1-216ENST00000602557 NPIPB11E5RHQ5 1161 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 IFI27L1Q96BM0 104 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 C18orf12Q96KH6 178 aa7.32□□□□□ -1.24
CSMD1-216ENST00000602557 IGKV1D-42A0A075B6H8 117 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 TMEM144Q7Z5S9 345 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 MPZP25189 248 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A2PQ658T7 463 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 GNB1LQ9BYB4 327 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 MST1P26927 711 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 FHL5Q5TD97 284 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 DRAM1Q8N682 238 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 DPH3Q96FX2 82 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 C9JCJ5 164 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 HBDP02042 147 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 CHTOPQ9Y3Y2 248 aaKnown RBP7.31□□□□□ -1.24
CSMD1-216ENST00000602557 AHRRA9YTQ3 701 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 CEACAM4O75871 244 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 IFITM1P13164 125 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 SCRT1Q9BWW7 348 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 C1orf43Q9BWL3 253 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 WDR90Q96KV7 1748 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 STPG1Q5TH74 334 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 ZNRF1Q8ND25 227 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 OR5P3Q8WZ94 311 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 ERG28Q9UKR5 140 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 NOTCH4Q99466 2003 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 A0A0U1RRA0 63 aa7.31□□□□□ -1.24
CSMD1-216ENST00000602557 ABCA2Q9BZC7 2435 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 TRAV24A0A0B4J272 114 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 C1QL2Q7Z5L3 287 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 OR9G1Q8NH87 305 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 CHCHD1Q96BP2 118 aaKnown RBP7.3□□□□□ -1.24
CSMD1-216ENST00000602557 LHX2P50458 406 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 C19orf48Q6RUI8 117 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms