RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 FAM25GB3EWG6 89 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 M0QYG6 137 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 IGKV1-5P01602 117 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 GIG44P09565 113 aaPredicted RBP6.92□□□□□ -1.3
VRK3-224ENST00000601849 YPEL3P61236 119 aaPredicted RBP6.92□□□□□ -1.3
VRK3-224ENST00000601849 MLANAQ16655 118 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 IZUMO4Q1ZYL8 232 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 C12orf74Q32Q52 190 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 TIGITQ495A1 244 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 C16orf54Q6UWD8 224 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 CSNK1G2-AS1Q8NCQ2 148 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 OR52E5Q8NH55 327 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 TERB2Q8NHR7 220 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 RNASEH2CQ8TDP1 164 aaKnown RBP6.92□□□□□ -1.3
VRK3-224ENST00000601849 AP3S1Q92572 193 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 FAM210BQ96KR6 192 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 TP53RKQ96S44 253 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 NRN1Q9NPD7 142 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 XCL2Q9UBD3 114 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 FAT2Q9NYQ8 4349 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 DNAH17Q9UFH2 4485 aa6.92□□□□□ -1.3
VRK3-224ENST00000601849 TEX13DA0A0J9YY54 714 aaPredicted RBP6.91□□□□□ -1.3
VRK3-224ENST00000601849 CEBPZOSA8MTT3 80 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 M0R2N4 97 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 RD3LP0DJH9 198 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 PI3P19957 117 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 C4BPBP20851 252 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 OR10J1P30954 320 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 TGFBR1P36897 503 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 ID1P41134 155 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 RORCP51449 518 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 DHODHQ02127 395 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 LGALS9BQ3B8N2 356 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 SP6Q3SY56 376 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 SCGB2B2Q4G0G5 96 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 SIGLEC15Q6ZMC9 328 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 YIPF6Q96EC8 236 aa6.91□□□□□ -1.3
VRK3-224ENST00000601849 C14orf166Q9Y224 244 aaKnown RBP6.91□□□□□ -1.3
VRK3-224ENST00000601849 FAM90A26D6RGX4 464 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 H3BMM0 161 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 IGKV1-17P01599 117 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 CD3DP04234 171 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 IL4P05112 153 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 FABP1P07148 127 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 ELK1P19419 428 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 UCP1P25874 307 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 NKX2-1P43699 371 aaPredicted RBP6.9□□□□□ -1.3
VRK3-224ENST00000601849 RND2P52198 227 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 EMP1P54849 157 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 TAS2R19P59542 299 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 C2orf83Q53S99 150 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 SPATA31B1PQ5VZV4 182 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 PRSS54Q6PEW0 395 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 ZNF767PQ75MW2 155 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 LHFPL1Q86WI0 220 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 SLC24A4Q8NFF2 622 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 ABHD1Q96SE0 405 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 NEU1Q99519 415 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 FNDC4Q9H6D8 234 aaPredicted RBP6.9□□□□□ -1.3
VRK3-224ENST00000601849 KLK11Q9UBX7 282 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 KCNIP3Q9Y2W7 256 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 RFNGQ9Y644 331 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 U3KQE9 123 aa6.9□□□□□ -1.3
VRK3-224ENST00000601849 IGHV3OR16-12A0A075B7B8 117 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 PIGBOS1A0A0B4J2F0 54 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 BUB3O43684 328 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 HPGDSO60760 199 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 CDS2O95674 445 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 RAB3DO95716 219 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 TOMM40O96008 361 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 P0C879 139 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 IGLC1P0CG04 106 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 HLA-DRB4P13762 266 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 ALDH3B2P48448 385 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 BSXQ3C1V8 233 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 RNF212Q495C1 297 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 SAMD13Q5VXD3 122 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 EBLN2Q6P2I7 272 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 TMEM229BQ8NBD8 167 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 OR51G1Q8NGK1 321 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 COQ8AQ8NI60 647 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 GLMPQ8WWB7 406 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 NPIPB3Q92617 1050 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 RBPMSQ93062 196 aaKnown RBP6.89□□□□□ -1.31
VRK3-224ENST00000601849 ACY3Q96HD9 319 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 LINC00052Q96N35 136 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 C7orf50Q9BRJ6 194 aaKnown RBP6.89□□□□□ -1.31
VRK3-224ENST00000601849 NIPSNAP3BQ9BS92 247 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 MRPS26Q9BYN8 205 aaKnown RBP6.89□□□□□ -1.31
VRK3-224ENST00000601849 TMEM222Q9H0R3 208 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 MRPL36Q9P0J6 103 aaKnown RBP6.89□□□□□ -1.31
VRK3-224ENST00000601849 MTFP1Q9UDX5 166 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 CELA1Q9UNI1 258 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 GOLT1BQ9Y3E0 138 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 U3KQ87 197 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 HLA-DRB4X5D2U9 266 aa6.89□□□□□ -1.31
VRK3-224ENST00000601849 PKHD1P08F94 4074 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 PKD1P98161 4303 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 DISC1C4P0D8 188 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 GABARAPH6UMI1 98 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms