RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 B3GALNT1O75752 331 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 ATG12O94817 140 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 YIF1AO95070 293 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 CXCL2P19875 107 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 FCGR2BP31994 310 aaPredicted RBP8.51□□□□□ -1.05
HIF3A-217ENST00000600236 ADMP35318 185 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 MFAP2P55001 183 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 MFAP4P55083 255 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 PRCDQ00LT1 54 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 ZNF345Q14585 488 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 WFDC3Q8IUB2 231 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 ZNF114Q8NC26 417 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 GINS3Q9BRX5 216 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 PDCD10Q9BUL8 212 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 KCNIP3Q9Y2W7 256 aa8.51□□□□□ -1.05
HIF3A-217ENST00000600236 FXYD6-FXYD2A0A087WZ82 144 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 IGHV7-4-1A0A0J9YVY3 117 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 F8W735 103 aaPredicted RBP8.5□□□□□ -1.05
HIF3A-217ENST00000600236 L7N2F9 121 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 ZNF207O43670 478 aaKnown RBP8.5□□□□□ -1.05
HIF3A-217ENST00000600236 GNG7O60262 68 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 CD5P06127 495 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 CTSGP08311 255 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 HSPE1P61604 102 aaKnown RBP8.5□□□□□ -1.05
HIF3A-217ENST00000600236 TNFRSF9Q07011 255 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 DEFB135Q30KP9 77 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 TMEM116Q8NCL8 245 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 PPP1R1CQ8WVI7 109 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 PINX1Q96BK5 328 aaKnown RBP8.5□□□□□ -1.05
HIF3A-217ENST00000600236 SEC22AQ96IW7 307 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 C2orf50Q96LR7 162 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 RHPN1-AS1Q9BWJ2 59 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 SMPXQ9UHP9 88 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 TNFSF18Q9UNG2 199 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 RYR2Q92736 4967 aa8.5□□□□□ -1.05
HIF3A-217ENST00000600236 DYNC2H1Q8NCM8 4307 aaKnown RBP8.49□□□□□ -1.05
HIF3A-217ENST00000600236 IGHV3OR16-8A0A075B7F1 116 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 PIGBOS1A0A0B4J2F0 54 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 A0A0J9YWU9 116 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 DUXBA0A1W2PPF3 345 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 C5orf51A6NDU8 294 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 I3L2K1 104 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 SCGB2A1O75556 95 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 ADAP1O75689 374 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 MPC2O95563 127 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 MT-CO2P00403 227 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 OR5AC1P0C628 307 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 S100A11P31949 105 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 SNCAP37840 140 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 NPBWR1P48145 328 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 AKR1C2P52895 323 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 PAFAH1B2P68402 229 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 OR2F1Q13607 317 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 PMS2P11Q13670 270 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 OPCMLQ14982 345 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 ODF3L2Q3SX64 289 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 LGI3Q8N145 548 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 KCNRGQ8N5I3 272 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 SLC35G3Q8N808 338 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 GLYATL2Q8WU03 294 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 IL22RA2Q969J5 263 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 OR10C1Q96KK4 312 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 TMEM56-RWDD3S4R434 201 aa8.49□□□□□ -1.05
HIF3A-217ENST00000600236 A0A0D9SG52 128 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 RNF222A6NCQ9 220 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 FAM25EA8MYX2 175 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 CORTO00230 105 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 CHEK1O14757 476 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 ARPC5O15511 151 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 ATP6V1G1O75348 118 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 IFNA21P01568 189 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 PET100P0DJ07 73 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 RPL35AP18077 110 aaKnown RBP8.48□□□□□ -1.05
HIF3A-217ENST00000600236 ATF4P18848 351 aaPredicted RBP8.48□□□□□ -1.05
HIF3A-217ENST00000600236 UCP1P25874 307 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 SUB1P53999 127 aaKnown RBP eCLIP8.48□□□□□ -1.05
HIF3A-217ENST00000600236 PRSS54Q6PEW0 395 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 TEX261Q6UWH6 196 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 TMUB2Q71RG4 321 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 THAP6Q8TBB0 222 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 RNF183Q96D59 192 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 RNF2Q99496 336 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 MFFQ9GZY8 342 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 TMEM222Q9H0R3 208 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 MAP6D1Q9H9H5 199 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 ENY2Q9NPA8 101 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 PRR13Q9NZ81 148 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 KLK5Q9Y337 293 aaPredicted RBP8.48□□□□□ -1.05
HIF3A-217ENST00000600236 TMED3Q9Y3Q3 217 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 U3KQ87 197 aa8.48□□□□□ -1.05
HIF3A-217ENST00000600236 SACSQ9NZJ4 4579 aa8.47□□□□□ -1.05
HIF3A-217ENST00000600236 C3orf85A0A1B0GTC6 90 aa8.47□□□□□ -1.05
HIF3A-217ENST00000600236 IFNA17P01571 189 aa8.47□□□□□ -1.05
HIF3A-217ENST00000600236 IGKV1-39P01597 117 aa8.47□□□□□ -1.05
HIF3A-217ENST00000600236 IGKV1D-39P04432 117 aa8.47□□□□□ -1.05
HIF3A-217ENST00000600236 TFPI2P48307 235 aa8.47□□□□□ -1.05
HIF3A-217ENST00000600236 HOXA1P49639 335 aaPredicted RBP8.47□□□□□ -1.05
HIF3A-217ENST00000600236 GGNBP1Q5YKI7 109 aa8.47□□□□□ -1.05
HIF3A-217ENST00000600236 ACOT7LQ6ZUV0 252 aa8.47□□□□□ -1.05
HIF3A-217ENST00000600236 ZNF546Q86UE3 836 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms