RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 FAM3BP58499 235 aaPredicted RBP12.11□□□□□ -0.47
VRK3-218ENST00000600031 HES1Q14469 280 aa12.11□□□□□ -0.47
VRK3-218ENST00000600031 KLF17Q5JT82 389 aaPredicted RBP12.11□□□□□ -0.47
VRK3-218ENST00000600031 GATAD1Q8WUU5 269 aa12.11□□□□□ -0.47
VRK3-218ENST00000600031 PACRGQ96M98 296 aaPredicted RBP12.11□□□□□ -0.47
VRK3-218ENST00000600031 FBXL15Q9H469 300 aa12.11□□□□□ -0.47
VRK3-218ENST00000600031 PDE6DO43924 150 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 PRCDQ00LT1 54 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 COA6Q5JTJ3 125 aaKnown RBP12.1□□□□□ -0.47
VRK3-218ENST00000600031 C10orf55Q5SWW7 151 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 FAM120AOSQ5T036 256 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 OR5B3Q8NH48 314 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 HIST1H2BLQ99880 126 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 COMMD5Q9GZQ3 224 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 PRDM13Q9H4Q3 707 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 HEYLQ9NQ87 328 aaPredicted RBP12.1□□□□□ -0.47
VRK3-218ENST00000600031 CGB1A6NKQ9 187 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 C11orf94C9JXX5 98 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 EBI3Q14213 229 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 MMDQ15546 238 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 PRSS8Q16651 343 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 NECAP1Q8NC96 275 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 OR2T10Q8NGZ9 312 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 ACY3Q96HD9 319 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 BTF3L4Q96K17 158 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 SOX21Q9Y651 276 aaPredicted RBP12.1□□□□□ -0.47
VRK3-218ENST00000600031 AKAP9Q99996 3911 aa12.1□□□□□ -0.47
VRK3-218ENST00000600031 RRHO14718 337 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 GGCTO75223 188 aaKnown RBP12.09□□□□□ -0.47
VRK3-218ENST00000600031 CDPF1Q6NVV7 123 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 KCNIP4Q6PIL6 250 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 PPP1R27Q86WC6 154 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 CIARTQ8N365 385 aaPredicted RBP12.09□□□□□ -0.47
VRK3-218ENST00000600031 OR10W1Q8NGF6 305 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 OR1L8Q8NGR8 309 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 OR1P1Q8NH06 330 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 OR5R1Q8NH85 324 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 RNASEH2CQ8TDP1 164 aaKnown RBP12.09□□□□□ -0.47
VRK3-218ENST00000600031 TMEM170AQ8WVE7 144 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 TXNDC17Q9BRA2 123 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 NDUFA4L2Q9NRX3 87 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 CREBBPQ92793 2442 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 ABCA1O95477 2261 aa12.09□□□□□ -0.47
VRK3-218ENST00000600031 A0A0U1RQK1 487 aa12.08□□□□□ -0.47
VRK3-218ENST00000600031 A0A1W2PPV4 95 aa12.08□□□□□ -0.47
VRK3-218ENST00000600031 F6UZH7 168 aa12.08□□□□□ -0.47
VRK3-218ENST00000600031 TYMSP04818 313 aa12.08□□□□□ -0.47
VRK3-218ENST00000600031 CD99P14209 185 aa12.08□□□□□ -0.47
VRK3-218ENST00000600031 DEFA6Q01524 100 aa12.08□□□□□ -0.47
VRK3-218ENST00000600031 MMD2Q8IY49 270 aa12.08□□□□□ -0.47
VRK3-218ENST00000600031 Q8N6K4 173 aa12.08□□□□□ -0.47
VRK3-218ENST00000600031 NPBQ8NG41 125 aa12.08□□□□□ -0.47
VRK3-218ENST00000600031 PLEKHA3Q9HB20 300 aa12.08□□□□□ -0.47
VRK3-218ENST00000600031 KCNIP2Q9NS61 270 aa12.08□□□□□ -0.47
VRK3-218ENST00000600031 ITPR3Q14573 2671 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 CSPG4Q6UVK1 2322 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 J3QLI3 93 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 FCN1O00602 326 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 NBR2O15453 112 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 NDUFA3O95167 84 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 IFNA10P01566 189 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 RD3LP0DJH9 198 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 OPRK1P41145 380 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 PKIAP61925 76 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 C9orf152Q5JTZ5 239 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 FOXC2Q99958 501 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 ENY2Q9NPA8 101 aa12.08□□□□□ -0.48
VRK3-218ENST00000600031 BRS3P32247 399 aa12.07□□□□□ -0.48
VRK3-218ENST00000600031 TNXAQ16473 311 aa12.07□□□□□ -0.48
VRK3-218ENST00000600031 A0A1W2PPQ1 181 aa12.07□□□□□ -0.48
VRK3-218ENST00000600031 FAM106CPP0CH98 169 aa12.07□□□□□ -0.48
VRK3-218ENST00000600031 TMEM11P17152 192 aa12.07□□□□□ -0.48
VRK3-218ENST00000600031 NPPCP23582 126 aa12.07□□□□□ -0.48
VRK3-218ENST00000600031 SSBP2P81877 361 aaPredicted RBP12.07□□□□□ -0.48
VRK3-218ENST00000600031 JOSD1Q15040 202 aaPredicted RBP12.07□□□□□ -0.48
VRK3-218ENST00000600031 PLGLAQ15195 96 aa12.07□□□□□ -0.48
VRK3-218ENST00000600031 IMMP2LQ96T52 175 aa12.07□□□□□ -0.48
VRK3-218ENST00000600031 XKRY2A2RUG3 117 aa12.06□□□□□ -0.48
VRK3-218ENST00000600031 GNB1P62873 340 aa12.06□□□□□ -0.48
VRK3-218ENST00000600031 GAMTQ14353 236 aa12.06□□□□□ -0.48
VRK3-218ENST00000600031 ACTL10Q5JWF8 245 aa12.06□□□□□ -0.48
VRK3-218ENST00000600031 LINC00469Q8N7U9 141 aa12.06□□□□□ -0.48
VRK3-218ENST00000600031 ELOVL1Q9BW60 279 aa12.06□□□□□ -0.48
VRK3-218ENST00000600031 MEGF9Q9H1U4 602 aa12.06□□□□□ -0.48
VRK3-218ENST00000600031 TSTD3H0UI37 97 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 ACTL6BO94805 426 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 CA2P00918 260 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 COMPP49747 757 aaPredicted RBP12.05□□□□□ -0.48
VRK3-218ENST00000600031 C5orf64Q2M2E5 130 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 CYB5R2Q6BCY4 276 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 TREML4Q6UXN2 200 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 LINC01551Q86U37 167 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 SLC24A4Q8NFF2 622 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 TEX15Q9BXT5 2789 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 NCBP2LA6PVI3 153 aaKnown RBP12.05□□□□□ -0.48
VRK3-218ENST00000600031 AMBPP02760 352 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 NPY1RP25929 384 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 RPL27AP46776 148 aaKnown RBP12.05□□□□□ -0.48
VRK3-218ENST00000600031 WT1-ASQ06250 92 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 CST9LP1Q5W188 147 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms