RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 NPY1RP25929 384 aa15.24■□□□□ 0.03
PNKP-212ENST00000599454 YPEL3P61236 119 aaPredicted RBP15.24■□□□□ 0.03
PNKP-212ENST00000599454 SNRPD3P62318 126 aaKnown RBP15.24■□□□□ 0.03
PNKP-212ENST00000599454 AARDQ4LEZ3 155 aa15.24■□□□□ 0.03
PNKP-212ENST00000599454 NDUFAF3Q9BU61 184 aa15.24■□□□□ 0.03
PNKP-212ENST00000599454 CELA1Q9UNI1 258 aa15.24■□□□□ 0.03
PNKP-212ENST00000599454 HPGDSO60760 199 aa15.23■□□□□ 0.03
PNKP-212ENST00000599454 SP6Q3SY56 376 aa15.23■□□□□ 0.03
PNKP-212ENST00000599454 RNASEH2CQ8TDP1 164 aaKnown RBP15.23■□□□□ 0.03
PNKP-212ENST00000599454 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.23■□□□□ 0.03
PNKP-212ENST00000599454 A0A0G2JRQ6 117 aa15.22■□□□□ 0.03
PNKP-212ENST00000599454 CD3DP04234 171 aa15.22■□□□□ 0.03
PNKP-212ENST00000599454 MED14OSP0DP75 135 aa15.22■□□□□ 0.03
PNKP-212ENST00000599454 C2orf83Q53S99 150 aa15.22■□□□□ 0.03
PNKP-212ENST00000599454 PRSS54Q6PEW0 395 aa15.22■□□□□ 0.03
PNKP-212ENST00000599454 TERB2Q8NHR7 220 aa15.22■□□□□ 0.03
PNKP-212ENST00000599454 KLK11Q9UBX7 282 aa15.22■□□□□ 0.03
PNKP-212ENST00000599454 FAM90A26D6RGX4 464 aa15.21■□□□□ 0.03
PNKP-212ENST00000599454 GSTZ1O43708 216 aaPredicted RBP15.21■□□□□ 0.03
PNKP-212ENST00000599454 OR10J1P30954 320 aa15.21■□□□□ 0.03
PNKP-212ENST00000599454 RND2P52198 227 aa15.21■□□□□ 0.03
PNKP-212ENST00000599454 NCS1P62166 190 aa15.21■□□□□ 0.03
PNKP-212ENST00000599454 ETFRF1Q6IPR1 90 aa15.21■□□□□ 0.03
PNKP-212ENST00000599454 MZT2AQ6P582 158 aa15.21■□□□□ 0.03
PNKP-212ENST00000599454 Q6ZRM9 215 aa15.21■□□□□ 0.03
PNKP-212ENST00000599454 NEU1Q99519 415 aa15.21■□□□□ 0.03
PNKP-212ENST00000599454 NRN1Q9NPD7 142 aa15.21■□□□□ 0.03
PNKP-212ENST00000599454 HEYLQ9NQ87 328 aaPredicted RBP15.21■□□□□ 0.03
PNKP-212ENST00000599454 MTFP1Q9UDX5 166 aa15.21■□□□□ 0.03
PNKP-212ENST00000599454 DNAH17Q9UFH2 4485 aa15.2■□□□□ 0.02
PNKP-212ENST00000599454 FAM25AB3EWG3 89 aa15.2■□□□□ 0.02
PNKP-212ENST00000599454 FAM25CB3EWG5 89 aa15.2■□□□□ 0.02
PNKP-212ENST00000599454 FAM25GB3EWG6 89 aa15.2■□□□□ 0.02
PNKP-212ENST00000599454 H3BMM0 161 aa15.2■□□□□ 0.02
PNKP-212ENST00000599454 CDS2O95674 445 aa15.2■□□□□ 0.02
PNKP-212ENST00000599454 RORCP51449 518 aa15.2■□□□□ 0.02
PNKP-212ENST00000599454 DHODHQ02127 395 aa15.2■□□□□ 0.02
PNKP-212ENST00000599454 RNASE12Q5GAN4 147 aaKnown RBP15.2■□□□□ 0.02
PNKP-212ENST00000599454 OR13C8Q8NGS7 320 aa15.2■□□□□ 0.02
PNKP-212ENST00000599454 OR52I2Q8NH67 350 aa15.2■□□□□ 0.02
PNKP-212ENST00000599454 XCL2Q9UBD3 114 aa15.2■□□□□ 0.02
PNKP-212ENST00000599454 FAT2Q9NYQ8 4349 aa15.2■□□□□ 0.02
PNKP-212ENST00000599454 PRSS29PA6NIE9 313 aa15.19■□□□□ 0.02
PNKP-212ENST00000599454 IL4P05112 153 aa15.19■□□□□ 0.02
PNKP-212ENST00000599454 VBP1P61758 197 aa15.19■□□□□ 0.02
PNKP-212ENST00000599454 USF2Q15853 346 aaPredicted RBP15.19■□□□□ 0.02
PNKP-212ENST00000599454 LGALS9BQ3B8N2 356 aa15.19■□□□□ 0.02
PNKP-212ENST00000599454 ZNF767PQ75MW2 155 aa15.19■□□□□ 0.02
PNKP-212ENST00000599454 NOXA1Q86UR1 476 aa15.19■□□□□ 0.02
PNKP-212ENST00000599454 SLC24A4Q8NFF2 622 aa15.19■□□□□ 0.02
PNKP-212ENST00000599454 C15orf40Q8WUR7 153 aa15.19■□□□□ 0.02
PNKP-212ENST00000599454 ABHD1Q96SE0 405 aa15.19■□□□□ 0.02
PNKP-212ENST00000599454 FUNDC2Q9BWH2 189 aa15.19■□□□□ 0.02
PNKP-212ENST00000599454 TMEM222Q9H0R3 208 aa15.19■□□□□ 0.02
PNKP-212ENST00000599454 CACFD1Q9UGQ2 172 aa15.19■□□□□ 0.02
PNKP-212ENST00000599454 TMEM189A5PLL7 270 aa15.18■□□□□ 0.02
PNKP-212ENST00000599454 BUB3O43684 328 aa15.18■□□□□ 0.02
PNKP-212ENST00000599454 CD74P04233 296 aa15.18■□□□□ 0.02
PNKP-212ENST00000599454 HLA-DRB4P13762 266 aa15.18■□□□□ 0.02
PNKP-212ENST00000599454 NUP62P37198 522 aaPredicted RBP15.18■□□□□ 0.02
PNKP-212ENST00000599454 TAS2R19P59542 299 aa15.18■□□□□ 0.02
PNKP-212ENST00000599454 SIGLEC15Q6ZMC9 328 aa15.18■□□□□ 0.02
PNKP-212ENST00000599454 ZNF705AQ6ZN79 300 aaPredicted RBP15.18■□□□□ 0.02
PNKP-212ENST00000599454 TMEM229BQ8NBD8 167 aa15.18■□□□□ 0.02
PNKP-212ENST00000599454 AP3S1Q92572 193 aa15.18■□□□□ 0.02
PNKP-212ENST00000599454 FAM210BQ96KR6 192 aa15.18■□□□□ 0.02
PNKP-212ENST00000599454 HLA-DRB4X5D2U9 266 aa15.18■□□□□ 0.02
PNKP-212ENST00000599454 PKHD1P08F94 4074 aa15.18■□□□□ 0.02
PNKP-212ENST00000599454 SMIM9A6NGZ8 99 aa15.17■□□□□ 0.02
PNKP-212ENST00000599454 RTL8CO15255 209 aa15.17■□□□□ 0.02
PNKP-212ENST00000599454 TNFAIP8O95379 198 aa15.17■□□□□ 0.02
PNKP-212ENST00000599454 TOMM40O96008 361 aa15.17■□□□□ 0.02
PNKP-212ENST00000599454 OR5AC1P0C628 307 aa15.17■□□□□ 0.02
PNKP-212ENST00000599454 SPART-AS1P0CW21 52 aa15.17■□□□□ 0.02
PNKP-212ENST00000599454 NKX2-1P43699 371 aaPredicted RBP15.17■□□□□ 0.02
PNKP-212ENST00000599454 SCGB2B2Q4G0G5 96 aa15.17■□□□□ 0.02
PNKP-212ENST00000599454 MARCH1Q8TCQ1 289 aa15.17■□□□□ 0.02
PNKP-212ENST00000599454 RBPMSQ93062 196 aaKnown RBP15.17■□□□□ 0.02
PNKP-212ENST00000599454 CACNG5Q9UF02 275 aa15.17■□□□□ 0.02
PNKP-212ENST00000599454 C14orf166Q9Y224 244 aaKnown RBP15.17■□□□□ 0.02
PNKP-212ENST00000599454 TEX13DA0A0J9YY54 714 aaPredicted RBP15.16■□□□□ 0.02
PNKP-212ENST00000599454 RAB3DO95716 219 aa15.16■□□□□ 0.02
PNKP-212ENST00000599454 RD3LP0DJH9 198 aa15.16■□□□□ 0.02
PNKP-212ENST00000599454 OR4D10Q8NGI6 311 aa15.16■□□□□ 0.02
PNKP-212ENST00000599454 GLYATL2Q8WU03 294 aa15.16■□□□□ 0.02
PNKP-212ENST00000599454 EXTL2Q9UBQ6 330 aa15.16■□□□□ 0.02
PNKP-212ENST00000599454 PFDN2Q9UHV9 154 aa15.16■□□□□ 0.02
PNKP-212ENST00000599454 DNAH2Q9P225 4427 aa15.16■□□□□ 0.02
PNKP-212ENST00000599454 TEX48A0A1B0GUV7 120 aa15.15■□□□□ 0.02
PNKP-212ENST00000599454 CEBPZOSA8MTT3 80 aa15.15■□□□□ 0.02
PNKP-212ENST00000599454 ZNF705FA8MVS1 300 aaPredicted RBP15.15■□□□□ 0.02
PNKP-212ENST00000599454 ZNF705DP0CH99 300 aaPredicted RBP15.15■□□□□ 0.02
PNKP-212ENST00000599454 ZNF705BP0CI00 300 aaPredicted RBP15.15■□□□□ 0.02
PNKP-212ENST00000599454 STEAP1BQ6NZ63 245 aa15.15■□□□□ 0.02
PNKP-212ENST00000599454 SELENOHQ8IZQ5 122 aaKnown RBP15.15■□□□□ 0.02
PNKP-212ENST00000599454 LHFPL5Q8TAF8 219 aa15.15■□□□□ 0.02
PNKP-212ENST00000599454 NAA60Q9H7X0 242 aa15.15■□□□□ 0.02
PNKP-212ENST00000599454 M0R2N4 97 aa15.14■□□□□ 0.01
PNKP-212ENST00000599454 IFNA10P01566 189 aa15.14■□□□□ 0.01
PNKP-212ENST00000599454 IFNA21P01568 189 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms