RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 OR52B4Q8NGK2 314 aa12.53□□□□□ -0.4
SSBP4-204ENST00000597724 CIB3Q96Q77 187 aaPredicted RBP12.53□□□□□ -0.4
SSBP4-204ENST00000597724 SPAG8Q99932 426 aaPredicted RBP12.53□□□□□ -0.4
SSBP4-204ENST00000597724 MAGT1Q9H0U3 335 aa12.53□□□□□ -0.4
SSBP4-204ENST00000597724 TUBA4BQ9H853 241 aa12.53□□□□□ -0.4
SSBP4-204ENST00000597724 NUDT15Q9NV35 164 aa12.53□□□□□ -0.4
SSBP4-204ENST00000597724 TRAV6A0A075B6T7 132 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 IGHV3-49A0A0A0MS15 119 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 OR11H12B2RN74 326 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 OR10J1P30954 320 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 ID3Q02535 119 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 ASAH1Q13510 395 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 OR1S2Q8NGQ3 325 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 NPIPB3Q92617 1050 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 ACY3Q96HD9 319 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 RNF2Q99496 336 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 WFDC10AQ9H1F0 79 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 U3KQK5 164 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 TENM3Q9P273 2699 aa12.52□□□□□ -0.41
SSBP4-204ENST00000597724 IGHV3OR16-13A0A075B7E8 117 aa12.51□□□□□ -0.41
SSBP4-204ENST00000597724 IGHV3-74A0A0B4J1X5 117 aa12.51□□□□□ -0.41
SSBP4-204ENST00000597724 FAM240BA0A1B0GVZ2 78 aa12.51□□□□□ -0.41
SSBP4-204ENST00000597724 WRBO00258 174 aa12.51□□□□□ -0.41
SSBP4-204ENST00000597724 UPK1BO75841 260 aa12.51□□□□□ -0.41
SSBP4-204ENST00000597724 H2AFB2P0C5Z0 115 aa12.51□□□□□ -0.41
SSBP4-204ENST00000597724 GPX4P36969 197 aaPredicted RBP12.51□□□□□ -0.41
SSBP4-204ENST00000597724 YPEL3P61236 119 aaPredicted RBP12.51□□□□□ -0.41
SSBP4-204ENST00000597724 RAB11AP62491 216 aa12.51□□□□□ -0.41
SSBP4-204ENST00000597724 MZT2BQ6NZ67 158 aa12.51□□□□□ -0.41
SSBP4-204ENST00000597724 LINC00322Q6ZN03 302 aaPredicted RBP12.51□□□□□ -0.41
SSBP4-204ENST00000597724 OR4D5Q8NGN0 318 aa12.51□□□□□ -0.41
SSBP4-204ENST00000597724 VSIRQ9H7M9 311 aa12.51□□□□□ -0.41
SSBP4-204ENST00000597724 APOHP02749 345 aaPredicted RBP12.5□□□□□ -0.41
SSBP4-204ENST00000597724 IFITM3Q01628 133 aa12.5□□□□□ -0.41
SSBP4-204ENST00000597724 GAMTQ14353 236 aa12.5□□□□□ -0.41
SSBP4-204ENST00000597724 FAM90A2PQ658T7 463 aa12.5□□□□□ -0.41
SSBP4-204ENST00000597724 Q8WTZ3 238 aa12.5□□□□□ -0.41
SSBP4-204ENST00000597724 ST8SIA2Q92186 375 aa12.5□□□□□ -0.41
SSBP4-204ENST00000597724 NPPCP23582 126 aa12.49□□□□□ -0.41
SSBP4-204ENST00000597724 BMI1P35226 326 aa12.49□□□□□ -0.41
SSBP4-204ENST00000597724 NKX2-1P43699 371 aaPredicted RBP12.49□□□□□ -0.41
SSBP4-204ENST00000597724 POLR2GP62487 172 aaKnown RBP eCLIP12.49□□□□□ -0.41
SSBP4-204ENST00000597724 RPP30P78346 268 aaKnown RBP12.49□□□□□ -0.41
SSBP4-204ENST00000597724 HAGHQ16775 308 aa12.49□□□□□ -0.41
SSBP4-204ENST00000597724 LILRB2Q8N423 598 aa12.49□□□□□ -0.41
SSBP4-204ENST00000597724 ZNF431Q8TF32 576 aaPredicted RBP12.49□□□□□ -0.41
SSBP4-204ENST00000597724 SEC22CQ9BRL7 303 aa12.49□□□□□ -0.41
SSBP4-204ENST00000597724 TM2D3Q9BRN9 247 aa12.49□□□□□ -0.41
SSBP4-204ENST00000597724 SRD5A3Q9H8P0 318 aa12.49□□□□□ -0.41
SSBP4-204ENST00000597724 RBMY1BA6NDE4 496 aaKnown RBP12.48□□□□□ -0.41
SSBP4-204ENST00000597724 RBMY1EA6NEQ0 496 aaKnown RBP12.48□□□□□ -0.41
SSBP4-204ENST00000597724 OR4C46A6NHA9 309 aa12.48□□□□□ -0.41
SSBP4-204ENST00000597724 CD5P06127 495 aa12.48□□□□□ -0.41
SSBP4-204ENST00000597724 RBMY1DP0C7P1 496 aaKnown RBP12.48□□□□□ -0.41
SSBP4-204ENST00000597724 CRYBB3P26998 211 aa12.48□□□□□ -0.41
SSBP4-204ENST00000597724 IAH1Q2TAA2 248 aaPredicted RBP12.48□□□□□ -0.41
SSBP4-204ENST00000597724 ZBTB8BQ8NAP8 495 aaPredicted RBP12.48□□□□□ -0.41
SSBP4-204ENST00000597724 SLC35E1Q96K37 410 aa12.48□□□□□ -0.41
SSBP4-204ENST00000597724 METTL26Q96S19 204 aa12.48□□□□□ -0.41
SSBP4-204ENST00000597724 ZMAT4Q9H898 229 aa12.48□□□□□ -0.41
SSBP4-204ENST00000597724 PAIP2BQ9ULR5 123 aaKnown RBP12.48□□□□□ -0.41
SSBP4-204ENST00000597724 HUWE1Q7Z6Z7 4374 aaKnown RBP12.48□□□□□ -0.41
SSBP4-204ENST00000597724 IGHV3-66A0A0C4DH42 116 aa12.47□□□□□ -0.41
SSBP4-204ENST00000597724 A0A1W2PS18 150 aa12.47□□□□□ -0.41
SSBP4-204ENST00000597724 PRSS46E5RG02 174 aa12.47□□□□□ -0.41
SSBP4-204ENST00000597724 TOMM40O96008 361 aa12.47□□□□□ -0.41
SSBP4-204ENST00000597724 RD3LP0DJH9 198 aa12.47□□□□□ -0.41
SSBP4-204ENST00000597724 SPANXN5Q5MJ07 72 aa12.47□□□□□ -0.41
SSBP4-204ENST00000597724 TCF24Q7RTU0 167 aa12.47□□□□□ -0.41
SSBP4-204ENST00000597724 RCHY1Q96PM5 261 aa12.47□□□□□ -0.41
SSBP4-204ENST00000597724 TMEM231Q9H6L2 316 aa12.47□□□□□ -0.41
SSBP4-204ENST00000597724 STRAPQ9Y3F4 350 aaKnown RBP12.47□□□□□ -0.41
SSBP4-204ENST00000597724 H3BP45 60 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 DFFBO76075 338 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 PSG1P11464 419 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 PAX9P55771 341 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 ODF3L2Q3SX64 289 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 C12orf45Q8N5I9 185 aaPredicted RBP12.46□□□□□ -0.41
SSBP4-204ENST00000597724 SMIM8Q96KF7 97 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 WWC2-AS2Q96NR7 200 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 CITED4Q96RK1 184 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 FAM110AQ9BQ89 295 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 PSENENQ9NZ42 101 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 GSKIPQ9P0R6 139 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 UBQLN2Q9UHD9 624 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 U3KQE9 123 aa12.46□□□□□ -0.41
SSBP4-204ENST00000597724 IGKV3-7A0A075B6H7 116 aa12.45□□□□□ -0.42
SSBP4-204ENST00000597724 IGKV1D-37A0A075B6S9 117 aa12.45□□□□□ -0.42
SSBP4-204ENST00000597724 ZFP92A6NM28 416 aa12.45□□□□□ -0.42
SSBP4-204ENST00000597724 CCSO14618 274 aa12.45□□□□□ -0.42
SSBP4-204ENST00000597724 SSSCA1O60232 199 aa12.45□□□□□ -0.42
SSBP4-204ENST00000597724 IL4P05112 153 aa12.45□□□□□ -0.42
SSBP4-204ENST00000597724 USF2Q15853 346 aaPredicted RBP12.45□□□□□ -0.42
SSBP4-204ENST00000597724 ENKURQ8TC29 256 aa12.45□□□□□ -0.42
SSBP4-204ENST00000597724 IGKV1OR2-108A0A075B7D4 117 aa12.44□□□□□ -0.42
SSBP4-204ENST00000597724 SCGB1D2O95969 90 aa12.44□□□□□ -0.42
SSBP4-204ENST00000597724 IL5P05113 134 aa12.44□□□□□ -0.42
SSBP4-204ENST00000597724 HNRNPCP07910 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
SSBP4-204ENST00000597724 TFPI2P48307 235 aa12.44□□□□□ -0.42
SSBP4-204ENST00000597724 PAFAH1B2P68402 229 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms