RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 BCL2L11O43521 198 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 NDUFB8O95169 186 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 IFNA5P01569 189 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 RAB9AP51151 201 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 RND2P52198 227 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 ZNF266Q14584 549 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 KLK9Q2XQG4 91 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 KHDC1LQ5JSQ8 128 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 C10orf99Q6UWK7 81 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 TMUB2Q71RG4 321 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 C9orf62Q8N4C0 152 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 C21orf62Q9NYP8 219 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 KLK9Q9UKQ9 250 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 HUWE1Q7Z6Z7 4374 aaKnown RBP9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 TRBV7-1A0A0A6YYK4 115 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 MFSD2BA6NFX1 497 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 K7EIM0 57 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 IGHV3-48P01763 117 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 NPBWR1P48145 328 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 MFAP4P55083 255 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 LGALSLQ3ZCW2 172 aaPredicted RBP9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 Q56UQ5 140 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 FAM209BQ5JX69 171 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 LCNL1Q6ZST4 164 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 UBAC2Q8NBM4 344 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 SCGB1C1Q8TD33 95 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 SCARB1Q8WTV0 552 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 BSCL2Q96G97 398 aaPredicted RBP9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 KLK15Q9H2R5 256 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 FNDC4Q9H6D8 234 aaPredicted RBP9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 GAR1Q9NY12 217 aaKnown RBP9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 S4R3C0 116 aa9.34□□□□□ -0.91
SHKBP1-213ENST00000597325 GNG7O60262 68 aa9.33□□□□□ -0.92
SHKBP1-213ENST00000597325 IGHV3-23P01764 117 aa9.33□□□□□ -0.92
SHKBP1-213ENST00000597325 RPLP1P05386 114 aaKnown RBP9.33□□□□□ -0.92
SHKBP1-213ENST00000597325 FGF7P21781 194 aa9.33□□□□□ -0.92
SHKBP1-213ENST00000597325 RAB31Q13636 194 aa9.33□□□□□ -0.92
SHKBP1-213ENST00000597325 GAMTQ14353 236 aa9.33□□□□□ -0.92
SHKBP1-213ENST00000597325 VWC2Q2TAL6 325 aa9.33□□□□□ -0.92
SHKBP1-213ENST00000597325 RNF152Q8N8N0 203 aa9.33□□□□□ -0.92
SHKBP1-213ENST00000597325 OR4X1Q8NH49 305 aa9.33□□□□□ -0.92
SHKBP1-213ENST00000597325 NPVFQ9HCQ7 196 aa9.33□□□□□ -0.92
SHKBP1-213ENST00000597325 ZFP92A6NM28 416 aa9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 JTBO76095 146 aa9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 IGHV3-11P01762 117 aa9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 FABP1P07148 127 aa9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 EIF5AP63241 154 aaKnown RBP9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 MLANAQ16655 118 aa9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 TEPPQ6URK8 271 aa9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 TMEM144Q7Z5S9 345 aa9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 TMEM116Q8NCL8 245 aa9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 ZNF502Q8TBZ5 544 aa9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 NPIPB3Q92617 1050 aa9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 TXN2Q99757 166 aa9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 ZNF471Q9BX82 626 aaPredicted RBP9.32□□□□□ -0.92
SHKBP1-213ENST00000597325 TRAV30A0A087WSZ9 112 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 TCRBV4S1A1TA0A5B7 111 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 OR2T8A6NH00 312 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 NUDT19A8MXV4 375 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 NUPL2O15504 423 aaKnown RBP9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 MPDU1O75352 247 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 CLN5O75503 358 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 OR10J1P30954 320 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 GPR183P32249 361 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 OPCMLQ14982 345 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 RPL7L1Q6DKI1 246 aaKnown RBP9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 LAMTOR1Q6IAA8 161 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 BTNL8Q6UX41 500 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 CLEC19AQ6UXS0 136 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 ZNF491Q8N8L2 437 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 ZNF709Q8N972 641 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 MYOZ3Q8TDC0 251 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 WIPF2Q8TF74 440 aaPredicted RBP9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 UBE2E2Q96LR5 201 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 CCDC140Q96MF4 163 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 ATP6V0BQ99437 205 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 PARD6GQ9BYG4 376 aaPredicted RBP9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 GNB4Q9HAV0 340 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 WFDC1Q9HC57 220 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 KCNIP2Q9NS61 270 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 WDR83OSQ9Y284 106 aa9.31□□□□□ -0.92
SHKBP1-213ENST00000597325 LCE6AA0A183 80 aa9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 C17orf112F2Z3M2 114 aa9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 LGALS1P09382 135 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 CD28P10747 220 aa9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 TPT1P13693 172 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 FCGR2BP31994 310 aaPredicted RBP9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 ARL3P36405 182 aa9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 CASC10Q5T4H9 136 aa9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 ZNF343Q6P1L6 599 aa9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 SPSB3Q6PJ21 355 aa9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 C11orf44Q8N8P7 122 aa9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 KLHL30-AS1Q8NEE0 82 aa9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 C4orf3Q8WVX3 66 aa9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 OR5B12Q96R08 314 aa9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 WDR61Q9GZS3 305 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 MRPL36Q9P0J6 103 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 TSSC4Q9Y5U2 329 aaPredicted RBP9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 HECTD4Q9Y4D8 3996 aa9.3□□□□□ -0.92
SHKBP1-213ENST00000597325 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms