RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 GIPP09681 153 aaPredicted RBP10.96□□□□□ -0.65
VRK3-213ENST00000597215 IGLC1P0CG04 106 aa10.96□□□□□ -0.65
VRK3-213ENST00000597215 INSL3P51460 131 aa10.96□□□□□ -0.65
VRK3-213ENST00000597215 ZNF600Q6ZNG1 722 aa10.96□□□□□ -0.65
VRK3-213ENST00000597215 ACOT7LQ6ZUV0 252 aa10.96□□□□□ -0.65
VRK3-213ENST00000597215 TMEM190Q8WZ59 177 aa10.96□□□□□ -0.65
VRK3-213ENST00000597215 OR5AC2Q9NZP5 309 aa10.96□□□□□ -0.65
VRK3-213ENST00000597215 UFC1Q9Y3C8 167 aa10.96□□□□□ -0.65
VRK3-213ENST00000597215 FAM24AA6NFZ4 105 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 A8MWP6 167 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 FNDC10F2Z333 226 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 H0YIZ8 118 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 SAP30O75446 220 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 IGKV1-17P01599 117 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 P2RY1P47900 373 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 DLK1P80370 383 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 TIGITQ495A1 244 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 OXLD1Q5BKU9 147 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 SAMD5Q5TGI4 173 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 UNQ9165/PRO28630Q6UXU0 137 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 STX12Q86Y82 276 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 TMEM252Q8N6L7 170 aa10.95□□□□□ -0.66
VRK3-213ENST00000597215 SMCO3A2RU48 225 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 ZFP92A6NM28 416 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 G3V4G9 280 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 WIPF1O43516 503 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 CST7O76096 145 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 YIF1AO95070 293 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 ELLP55199 621 aaPredicted RBP10.94□□□□□ -0.66
VRK3-213ENST00000597215 RAP2BP61225 183 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 YPEL3P61236 119 aaPredicted RBP10.94□□□□□ -0.66
VRK3-213ENST00000597215 AKR1C1Q04828 323 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 HAPLN4Q86UW8 402 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 C20orf24Q9BUV8 137 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 GGACTQ9BVM4 153 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 SLC25A31Q9H0C2 315 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 SIGLEC8Q9NYZ4 499 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 MBD2Q9UBB5 411 aa10.94□□□□□ -0.66
VRK3-213ENST00000597215 PUS1Q9Y606 427 aaKnown RBP eCLIP10.94□□□□□ -0.66
VRK3-213ENST00000597215 IGSF23A1L1A6 192 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 TMEM213A2RRL7 107 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 C2orf70A6NJV1 201 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 FABP1P07148 127 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 CSN3P07498 182 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 SULT1A1P50225 295 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 HBG1P69891 147 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 HBG2P69892 147 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 FGL1Q08830 312 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 SLC38A11Q08AI6 406 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 ARL16Q0P5N6 197 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 IL34Q6ZMJ4 242 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 TMEM144Q7Z5S9 345 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 THAP8Q8NA92 274 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 THAP6Q8TBB0 222 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 MARC2Q969Z3 335 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 ZNF414Q96IQ9 312 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 GINS3Q9BRX5 216 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 RNF126Q9BV68 326 aa10.93□□□□□ -0.66
VRK3-213ENST00000597215 DAZ1Q9NQZ3 744 aaKnown RBP10.93□□□□□ -0.66
VRK3-213ENST00000597215 K7EMT4 169 aa10.92□□□□□ -0.66
VRK3-213ENST00000597215 FOLR2P14207 255 aa10.92□□□□□ -0.66
VRK3-213ENST00000597215 S100A11P31949 105 aa10.92□□□□□ -0.66
VRK3-213ENST00000597215 TM4SF20Q53R12 229 aa10.92□□□□□ -0.66
VRK3-213ENST00000597215 TOMM20LQ6UXN7 152 aa10.92□□□□□ -0.66
VRK3-213ENST00000597215 Q6ZNX1 250 aa10.92□□□□□ -0.66
VRK3-213ENST00000597215 LILRB2Q8N423 598 aa10.92□□□□□ -0.66
VRK3-213ENST00000597215 TMEM217Q8N7C4 229 aa10.92□□□□□ -0.66
VRK3-213ENST00000597215 Q8WTZ3 238 aa10.92□□□□□ -0.66
VRK3-213ENST00000597215 TRGV9Q99603 122 aa10.92□□□□□ -0.66
VRK3-213ENST00000597215 NPVFQ9HCQ7 196 aa10.92□□□□□ -0.66
VRK3-213ENST00000597215 IGKV1D-37A0A075B6S9 117 aa10.91□□□□□ -0.66
VRK3-213ENST00000597215 IGKV1OR2-108A0A075B7D4 117 aa10.91□□□□□ -0.66
VRK3-213ENST00000597215 IGHV3OR16-8A0A075B7F1 116 aa10.91□□□□□ -0.66
VRK3-213ENST00000597215 TRAV14DV4A0A0A6YYC5 116 aa10.91□□□□□ -0.66
VRK3-213ENST00000597215 TOMM40O96008 361 aa10.91□□□□□ -0.66
VRK3-213ENST00000597215 RD3LP0DJH9 198 aa10.91□□□□□ -0.66
VRK3-213ENST00000597215 LYL1P12980 280 aa10.91□□□□□ -0.66
VRK3-213ENST00000597215 CBLN1P23435 193 aa10.91□□□□□ -0.66
VRK3-213ENST00000597215 EWSR1Q01844 656 aaKnown RBP eCLIP10.91□□□□□ -0.66
VRK3-213ENST00000597215 BAXQ07812 192 aa10.91□□□□□ -0.66
VRK3-213ENST00000597215 DYNLRB2Q8TF09 96 aa10.91□□□□□ -0.66
VRK3-213ENST00000597215 ZFAND3Q9H8U3 227 aa10.91□□□□□ -0.66
VRK3-213ENST00000597215 MRPL27Q9P0M9 148 aaKnown RBP10.91□□□□□ -0.66
VRK3-213ENST00000597215 ZMAT5Q9UDW3 170 aaKnown RBP10.91□□□□□ -0.66
VRK3-213ENST00000597215 ZNF207O43670 478 aaKnown RBP10.9□□□□□ -0.66
VRK3-213ENST00000597215 C8orf88P0DMB2 117 aa10.9□□□□□ -0.66
VRK3-213ENST00000597215 ZNF90Q03938 601 aa10.9□□□□□ -0.66
VRK3-213ENST00000597215 ATP6V1FQ16864 119 aa10.9□□□□□ -0.66
VRK3-213ENST00000597215 BEAN1Q3B7T3 259 aa10.9□□□□□ -0.66
VRK3-213ENST00000597215 KPRPQ5T749 579 aaPredicted RBP10.9□□□□□ -0.66
VRK3-213ENST00000597215 ADAMTSL5Q6ZMM2 481 aa10.9□□□□□ -0.66
VRK3-213ENST00000597215 TMEM147Q9BVK8 224 aa10.9□□□□□ -0.66
VRK3-213ENST00000597215 UQCC1Q9NVA1 299 aa10.9□□□□□ -0.66
VRK3-213ENST00000597215 TECRQ9NZ01 308 aaKnown RBP10.9□□□□□ -0.66
VRK3-213ENST00000597215 IGLV1-51P01701 117 aa10.89□□□□□ -0.67
VRK3-213ENST00000597215 PSG1P11464 419 aa10.89□□□□□ -0.67
VRK3-213ENST00000597215 EDN2P20800 178 aa10.89□□□□□ -0.67
VRK3-213ENST00000597215 RPL12P30050 165 aaKnown RBP10.89□□□□□ -0.67
VRK3-213ENST00000597215 BMI1P35226 326 aa10.89□□□□□ -0.67
VRK3-213ENST00000597215 NHLH2Q02577 135 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms