RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 TRAV14DV4A0A0A6YYC5 116 aa13.74□□□□□ -0.21
ZNF558-204ENST00000596172 A8MZ25 164 aa13.74□□□□□ -0.21
ZNF558-204ENST00000596172 OR10J1P30954 320 aa13.74□□□□□ -0.21
ZNF558-204ENST00000596172 POLR2GP62487 172 aaKnown RBP eCLIP13.74□□□□□ -0.21
ZNF558-204ENST00000596172 GTSCR1Q86UQ5 136 aa13.74□□□□□ -0.21
ZNF558-204ENST00000596172 TMEM61Q8N0U2 210 aa13.74□□□□□ -0.21
ZNF558-204ENST00000596172 NPIPB3Q92617 1050 aa13.74□□□□□ -0.21
ZNF558-204ENST00000596172 SMIM8Q96KF7 97 aa13.74□□□□□ -0.21
ZNF558-204ENST00000596172 MARVELD1Q9BSK0 173 aa13.74□□□□□ -0.21
ZNF558-204ENST00000596172 ZFAND3Q9H8U3 227 aa13.74□□□□□ -0.21
ZNF558-204ENST00000596172 IGHV7-4-1A0A0J9YVY3 117 aa13.73□□□□□ -0.21
ZNF558-204ENST00000596172 PRAF2O60831 178 aa13.73□□□□□ -0.21
ZNF558-204ENST00000596172 TAS2R30P59541 319 aa13.73□□□□□ -0.21
ZNF558-204ENST00000596172 TIGITQ495A1 244 aa13.73□□□□□ -0.21
ZNF558-204ENST00000596172 WDR89Q96FK6 387 aaPredicted RBP13.73□□□□□ -0.21
ZNF558-204ENST00000596172 GPN1Q9HCN4 374 aaPredicted RBP13.73□□□□□ -0.21
ZNF558-204ENST00000596172 STRAPQ9Y3F4 350 aaKnown RBP13.73□□□□□ -0.21
ZNF558-204ENST00000596172 SNRPGP15A8MWD9 76 aa13.72□□□□□ -0.21
ZNF558-204ENST00000596172 INMT-MINDY4F8WBC2 141 aa13.72□□□□□ -0.21
ZNF558-204ENST00000596172 CHEK1O14757 476 aa13.72□□□□□ -0.21
ZNF558-204ENST00000596172 ZNF207O43670 478 aaKnown RBP13.72□□□□□ -0.21
ZNF558-204ENST00000596172 GAMTQ14353 236 aa13.72□□□□□ -0.21
ZNF558-204ENST00000596172 GUCA2BQ16661 112 aa13.72□□□□□ -0.21
ZNF558-204ENST00000596172 SPANXN5Q5MJ07 72 aa13.72□□□□□ -0.21
ZNF558-204ENST00000596172 LAMTOR1Q6IAA8 161 aa13.72□□□□□ -0.21
ZNF558-204ENST00000596172 RBPMS2Q6ZRY4 209 aaKnown RBP13.72□□□□□ -0.21
ZNF558-204ENST00000596172 ACY3Q96HD9 319 aa13.72□□□□□ -0.21
ZNF558-204ENST00000596172 RAB40CQ96S21 281 aa13.72□□□□□ -0.21
ZNF558-204ENST00000596172 RHPN1-AS1Q9BWJ2 59 aa13.72□□□□□ -0.21
ZNF558-204ENST00000596172 GSKIPQ9P0R6 139 aa13.72□□□□□ -0.21
ZNF558-204ENST00000596172 PRSS46E5RG02 174 aa13.71□□□□□ -0.21
ZNF558-204ENST00000596172 TSPAN4O14817 238 aa13.71□□□□□ -0.21
ZNF558-204ENST00000596172 SCAF4O95104 1147 aaKnown RBP13.71□□□□□ -0.21
ZNF558-204ENST00000596172 BMI1P35226 326 aa13.71□□□□□ -0.21
ZNF558-204ENST00000596172 PAX9P55771 341 aa13.71□□□□□ -0.21
ZNF558-204ENST00000596172 Q8WTZ3 238 aa13.71□□□□□ -0.21
ZNF558-204ENST00000596172 SLC35E1Q96K37 410 aa13.71□□□□□ -0.21
ZNF558-204ENST00000596172 C2orf50Q96LR7 162 aa13.71□□□□□ -0.21
ZNF558-204ENST00000596172 SPAG8Q99932 426 aaPredicted RBP13.71□□□□□ -0.21
ZNF558-204ENST00000596172 PSENENQ9NZ42 101 aa13.71□□□□□ -0.21
ZNF558-204ENST00000596172 CCSO14618 274 aa13.7□□□□□ -0.22
ZNF558-204ENST00000596172 SSSCA1O60232 199 aa13.7□□□□□ -0.22
ZNF558-204ENST00000596172 MBPP02686 304 aaPredicted RBP13.7□□□□□ -0.22
ZNF558-204ENST00000596172 CD5P06127 495 aa13.7□□□□□ -0.22
ZNF558-204ENST00000596172 NPPCP23582 126 aa13.7□□□□□ -0.22
ZNF558-204ENST00000596172 NEURL2Q9BR09 285 aa13.7□□□□□ -0.22
ZNF558-204ENST00000596172 VSIRQ9H7M9 311 aa13.7□□□□□ -0.22
ZNF558-204ENST00000596172 C19orf73Q9NVV2 129 aa13.7□□□□□ -0.22
ZNF558-204ENST00000596172 PAIP2BQ9ULR5 123 aaKnown RBP13.7□□□□□ -0.22
ZNF558-204ENST00000596172 C5orf51A6NDU8 294 aa13.69□□□□□ -0.22
ZNF558-204ENST00000596172 FAM25EA8MYX2 175 aa13.69□□□□□ -0.22
ZNF558-204ENST00000596172 TSC22D2O75157 780 aa13.69□□□□□ -0.22
ZNF558-204ENST00000596172 TOMM40O96008 361 aa13.69□□□□□ -0.22
ZNF558-204ENST00000596172 NHLRC4P0CG21 123 aaPredicted RBP13.69□□□□□ -0.22
ZNF558-204ENST00000596172 RD3LP0DJH9 198 aa13.69□□□□□ -0.22
ZNF558-204ENST00000596172 IGHV4-30-4P0DP06 118 aa13.69□□□□□ -0.22
ZNF558-204ENST00000596172 CRYBB3P26998 211 aa13.69□□□□□ -0.22
ZNF558-204ENST00000596172 CD81P60033 236 aa13.69□□□□□ -0.22
ZNF558-204ENST00000596172 IL15RAQ13261 267 aa13.69□□□□□ -0.22
ZNF558-204ENST00000596172 METTL26Q96S19 204 aa13.69□□□□□ -0.22
ZNF558-204ENST00000596172 RNF2Q99496 336 aa13.69□□□□□ -0.22
ZNF558-204ENST00000596172 RCL1Q9Y2P8 373 aaKnown RBP13.69□□□□□ -0.22
ZNF558-204ENST00000596172 H3BP45 60 aa13.68□□□□□ -0.22
ZNF558-204ENST00000596172 SCGB1D2O95969 90 aa13.68□□□□□ -0.22
ZNF558-204ENST00000596172 FRMD6-AS1P0C7T7 363 aa13.68□□□□□ -0.22
ZNF558-204ENST00000596172 FAM90A2PQ658T7 463 aa13.68□□□□□ -0.22
ZNF558-204ENST00000596172 TMEM14EPQ6UXP3 125 aa13.68□□□□□ -0.22
ZNF558-204ENST00000596172 GSG1LQ6UXU4 331 aa13.68□□□□□ -0.22
ZNF558-204ENST00000596172 SELENOKQ9Y6D0 94 aa13.68□□□□□ -0.22
ZNF558-204ENST00000596172 IGKV1D-37A0A075B6S9 117 aa13.67□□□□□ -0.22
ZNF558-204ENST00000596172 A0A1W2PS18 150 aa13.67□□□□□ -0.22
ZNF558-204ENST00000596172 C7orf66A4D0T2 115 aa13.67□□□□□ -0.22
ZNF558-204ENST00000596172 PMS2P5A8MQ11 134 aa13.67□□□□□ -0.22
ZNF558-204ENST00000596172 FABP1P07148 127 aa13.67□□□□□ -0.22
ZNF558-204ENST00000596172 CD7P09564 240 aa13.67□□□□□ -0.22
ZNF558-204ENST00000596172 THAP8Q8NA92 274 aa13.67□□□□□ -0.22
ZNF558-204ENST00000596172 TRGV9Q99603 122 aa13.67□□□□□ -0.22
ZNF558-204ENST00000596172 TMEM231Q9H6L2 316 aa13.67□□□□□ -0.22
ZNF558-204ENST00000596172 U3KQE9 123 aa13.67□□□□□ -0.22
ZNF558-204ENST00000596172 COL7A1Q02388 2944 aa13.67□□□□□ -0.22
ZNF558-204ENST00000596172 IGHV3-49A0A0A0MS15 119 aa13.66□□□□□ -0.22
ZNF558-204ENST00000596172 ZFP92A6NM28 416 aa13.66□□□□□ -0.22
ZNF558-204ENST00000596172 APOHP02749 345 aaPredicted RBP13.66□□□□□ -0.22
ZNF558-204ENST00000596172 PSG1P11464 419 aa13.66□□□□□ -0.22
ZNF558-204ENST00000596172 ST8SIA2Q92186 375 aa13.66□□□□□ -0.22
ZNF558-204ENST00000596172 OR4C46A6NHA9 309 aa13.65□□□□□ -0.22
ZNF558-204ENST00000596172 OR11H12B2RN74 326 aa13.65□□□□□ -0.22
ZNF558-204ENST00000596172 FNDC10F2Z333 226 aa13.65□□□□□ -0.22
ZNF558-204ENST00000596172 K7EPK0 472 aa13.65□□□□□ -0.22
ZNF558-204ENST00000596172 PTTG1O95997 202 aa13.65□□□□□ -0.22
ZNF558-204ENST00000596172 LILRB2Q8N423 598 aa13.65□□□□□ -0.22
ZNF558-204ENST00000596172 OR51G1Q8NGK1 321 aa13.65□□□□□ -0.22
ZNF558-204ENST00000596172 NARS2Q96I59 477 aaKnown RBP13.65□□□□□ -0.22
ZNF558-204ENST00000596172 FAM110AQ9BQ89 295 aa13.65□□□□□ -0.22
ZNF558-204ENST00000596172 C11orf1Q9H5F2 150 aa13.65□□□□□ -0.22
ZNF558-204ENST00000596172 TUBA4BQ9H853 241 aa13.65□□□□□ -0.22
ZNF558-204ENST00000596172 IGKV1OR2-108A0A075B7D4 117 aa13.64□□□□□ -0.23
ZNF558-204ENST00000596172 IGHV3OR16-13A0A075B7E8 117 aa13.64□□□□□ -0.23
ZNF558-204ENST00000596172 IGHV3-74A0A0B4J1X5 117 aa13.64□□□□□ -0.23
ZNF558-204ENST00000596172 IL4P05112 153 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms